BAC Information

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BAC

Clone NameB6Ng01-121N12
Chromosome10 (Build37)
Map Location 30,962,522 - 30,963,604
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC212815, Trmt11, Hint3, Ncoa7, LOC382354, Hey2, LOC654431
Downstream geneEG432448, Hddc2, Tpd52l1, LOC100041294, Ibrdc1, LOC666055, LOC667752, LOC100040638, Tcba1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-121N12.bB6Ng01-121N12.g
ACCDH925424DH925425
length1,0791,078
definitionDH925424|Mus musculus domesticus DNA, BAC clone: B6Ng01-121N12, 5' end.DH925425|Mus musculus domesticus DNA, BAC clone: B6Ng01-121N12, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcactactcccttaacctgtttctctccttgaacacaggatttagc
tccattccatttcctgctgtccctttaataccatatgttttgtatttttc
ctttttaagctgcctgtgcttaatcagaatgttcttcatgagattaaatg
agaagacaaagtctttgttaggcttttggatataaattcctttaccttat
attcagtaagactcttcagagaaggacaaaaagcagttacaatcttcatc
aaaacatcatgagaatgaactccagagttcaaattatcctcagcatcaat
gccttccatgttcctactagggtggcccattaagtaccatttagcattcc
atggctttccaaatccaaaatccctacctctacattccttcaaacaaaaa
catggtcaattctgtcacagcagtaccccagtccctagtaccaacttctg
tcctagttagggtttccatttctgtgaaaaagacaccatgaccaaggtag
ctcttataaaagattacatttaattagggctaccttatctgagattcagt
ccattatcaacatggcaggaagcaagacagtgttctggcagacatgacgc
tggaggagctgaaagttattttgtcctgaagacaaatagaagaagactct
ctcgaagacatcttggaggaggggcttttctgcactgagtggagcttcaa
atcacctccctacacacttttctcaaccagatcacacctattccaacaag
gccatacctaatcatagtattttccatgggccaagcatactcaaagcacc
acaattttacctttcctgtgttcaaactctgaactcctggtacccttctc
ctttgaaatttctgaacattttcagtcttcatcaatggaaagttccatcc
tttcagtgtctgaggctgtactcttggtatcatccttaagtctttcatgt
cacatgcacagtctgttaggatatcagttgacttatatacacacacctac
tatctcctttgctttaaccactgtacctcacctggatcacctatatttct
acctggatcagggggtgggggggaaagac
gaattcttgcaaaaacaagagctaatgcattaagttgctccgcttctggc
ggggttagagcataaagtcacaccatggcatttgagacgtctgcatctgc
agcctggttgccaccctgtgcctcctcttgtgggggccaggaattctgga
gctgattgatctaagcaggaggtagggtggtgaccttgaaagtgattaca
agtaccagctagtgcagaaggaggaaaggaaggacatcacagcatatagg
ctgtgccaggcagtgttgagggcaaaggtaagggagtttcagtaccggga
gtagagaaccagagtacagctattacaagaaacaaactgagcaacaaaac
cagtgggtaaagaggaaagaccaagtttagtttttgccatgtcttttttt
acttgagaagaggaaggggacattttagtaggcatttagaaatgcagttg
tctttgtgtaatgctaaggtgggagaaagagggcaaacccagcacctcca
agtgatatttacagacactctgcttcatctgcaaggcatttgctgctgct
tctcactccagcaataattgtagtaacattgctgtcccaagagacaggtc
ccagactccctccctcaccccaagacagtatctagcaaagcctacttaca
gaggtaagcagccactttacacaattcatgcatatgtggctgacacccca
cacttgtctaggagttgttaaaaagccaagctgagcctctcttggttgtg
cctctgctgagatgctcagttttgggtgctgcattaaaaaaaaaattgtg
tgtgtggagagggtttctgggtgaaacactacttctagtggtggcccagt
ttgtggcaacatgcacctgccagccaatgaatgttaagtgatgtgagggc
taaaaagggaggcacacgttctattgctactacccaccagccttgattat
ggaactttcacaggtattgtggaaaatagccagcctccaggacaccctta
gattggtcaccaggaaggtgcattgtagctcaggtctgtactatgtttct
ccttgagtacagacctcttttgagaagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_30962522_30963604
seq2: B6Ng01-121N12.g_68_1145 (reverse)

seq1  CCTTC-CAAAAGAGGTTCTGTGAACATCAGGAGAAACATAGTTACCAAGA  49
      ||||| ||||||||| |||||  ||   ||||||||||||| |||  |||
seq2  CCTTCTCAAAAGAGG-TCTGT--ACTCAAGGAGAAACATAG-TAC--AGA  44

seq1  CCTGGAGGCTACCACTGCACC-TCCTGGTGACCAATCTAAGGGTGTTCCT  98
      ||||   |||| || |||||| ||||||||||||||||||||||| ||||
seq2  CCTG--AGCTA-CAATGCACCTTCCTGGTGACCAATCTAAGGGTG-TCCT  90

seq1  GGAGGCTGGCTCTCTCCCA-AATA-CTGTGGAAGGTCCATAATCAAGGCT  146
      ||||||||||| | | ||| |||| ||||| ||| |||||||||||||||
seq2  GGAGGCTGGCTATTTTCCACAATACCTGTGAAAGTTCCATAATCAAGGCT  140

seq1  GGTGGGTAGTAGCAATAG-ACGTGTGCCTCCCTTTTTAGCCCTCACATCA  195
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  GGTGGGTAGTAGCAATAGAACGTGTGCCTCCCTTTTTAGCCCTCACATCA  190

seq1  CTTACCATTCATTGGCTGGCAGGTGCATTGTTGCCACAAACTGGGCCACA  245
      |||| |||||||||||||||||||||| ||||||||||||||||||||| 
seq2  CTTAACATTCATTGGCTGGCAGGTGCA-TGTTGCCACAAACTGGGCCACC  239

seq1  ACTAGAAGTAGTGTTTCACCCAGAAACCCTCTCCACACACAC-ATTTTTT  294
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  ACTAGAAGTAGTGTTTCACCCAGAAACCCTCTCCACACACACAATTTTTT  289

seq1  TTTTAATGCAGCACCCAAAACTGAGCATCTCAGCAGAGGCACAACCAAGA  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAATGCAGCACCCAAAACTGAGCATCTCAGCAGAGGCACAACCAAGA  339

seq1  GAGGCTCAGCTTGGCTTTTTAACAACTCCTAGACAAGTGTGGGGTGTCAG  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCTCAGCTTGGCTTTTTAACAACTCCTAGACAAGTGTGGGGTGTCAG  389

seq1  CCACATATGCATGAATTGTGTAAAGTGGCTGCTTACCTCTGTAAGTAGGC  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACATATGCATGAATTGTGTAAAGTGGCTGCTTACCTCTGTAAGTAGGC  439

seq1  TTTGCTAGATACTGTCTTGGGGTGAGGGAGGGAGTCTGGGACCTGTCTCT  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCTAGATACTGTCTTGGGGTGAGGGAGGGAGTCTGGGACCTGTCTCT  489

seq1  TGGGACAGCAATGTTACTACAATTATTGCTGGAGTGAGAAGCAGCAGCAA  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGACAGCAATGTTACTACAATTATTGCTGGAGTGAGAAGCAGCAGCAA  539

seq1  ATGCCTTGCAGATGAAGCAGAGTGTCTGTAAATATCACTTGGAGGTGCTG  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCTTGCAGATGAAGCAGAGTGTCTGTAAATATCACTTGGAGGTGCTG  589

seq1  GGTTTGCCCTCTTTCTCCCACCTTAGCATTACACAAAGACAACTGCATTT  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTGCCCTCTTTCTCCCACCTTAGCATTACACAAAGACAACTGCATTT  639

seq1  CTAAATGCCTACTAAAATGTCCCCTTCCTCTTCTCAAGTAAAAAAAGACA  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAATGCCTACTAAAATGTCCCCTTCCTCTTCTCAAGTAAAAAAAGACA  689

seq1  TGGCAAAAACTAAACTTGGTCTTTCCTCTTTACCCACTGGTTTTGTTGCT  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCAAAAACTAAACTTGGTCTTTCCTCTTTACCCACTGGTTTTGTTGCT  739

seq1  CAGTTTGTTTCTTGTAATAGCTGTACTCTGGTTCTCTACTCCCGGTACTG  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTTGTTTCTTGTAATAGCTGTACTCTGGTTCTCTACTCCCGGTACTG  789

seq1  AAACTCCCTTACCTTTGCCCTCAACACTGCCTGGCACAGCCTATATGCTG  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTCCCTTACCTTTGCCCTCAACACTGCCTGGCACAGCCTATATGCTG  839

seq1  TGATGTCCTTCCTTTCCTCCTTCTGCACTAGCTGGTACTTGTAATCACTT  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGTCCTTCCTTTCCTCCTTCTGCACTAGCTGGTACTTGTAATCACTT  889

seq1  TCAAGGTCACCACCCTACCTCCTGCTTAGATCAATCAGCTCCAGAATTCC  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGGTCACCACCCTACCTCCTGCTTAGATCAATCAGCTCCAGAATTCC  939

seq1  TGGCCCCCACAAGAGGAGGCACAGGGTGGCAACCAGGCTGCAGATGCAGA  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCCCCACAAGAGGAGGCACAGGGTGGCAACCAGGCTGCAGATGCAGA  989

seq1  CGTCTCAAATGCCATGGTGTGACTTTATGCTCTAACCCCGCCAGAAGCGG  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTCTCAAATGCCATGGTGTGACTTTATGCTCTAACCCCGCCAGAAGCGG  1039

seq1  AGCAACTTAATGCATTAGCTCTTGTTTTTGCAAGAATTC  1083
      |||||||||||||||||||||||||||||||||||||||
seq2  AGCAACTTAATGCATTAGCTCTTGTTTTTGCAAGAATTC  1078