BAC Information

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BAC

Clone NameB6Ng01-121N16
Chromosome10 (Build37)
Map Location 67,158,352 - 67,311,299
singlet/doubletdoublet
Overlap geneLOC100039618
Upstream geneReep3, Jmjd1c, Nrbf2, Egr2, Gm237, LOC100040081
Downstream geneZfp365, Plekhk1, Arid5b, LOC100040136, 1700040L02Rik, EG665342, Tmem26
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-121N16.bB6Ng01-121N16.g
ACCDH925430DH925431
length1,136628
definitionDH925430|Mus musculus domesticus DNA, BAC clone: B6Ng01-121N16, 5' end.DH925431|Mus musculus domesticus DNA, BAC clone: B6Ng01-121N16, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(67,310,151 - 67,311,299)(67,158,352 - 67,158,979)
sequence
gaattcattatgtagtcctggacagcctctatctctggattctccagccg
catccccagagaactggaattagacgcgtgcatcacagtgcccctcagag
gaccaaggtgggtttctcttcttttcttttaccacttcatgatgtgaagg
cgatgtgcactcactggacattctaactttggtcttttcctgggctagcc
ttattcagtacaatgctttccttgtgctggtcagccacggctggccacgg
ccagccacggctccccgtagtcacgtgatcatgtggaacagcaccaggct
gtactgtgttgcttgaggtgttttgggcggaaatattcagtaaactgcat
caaatttcttgttcctttttctccttttttcccactacttgttaatattt
tattttatcataatcaccccaaccctaactcctcccacatatactcccta
cctctccaactttgtgcttctccttttcaaataacccacccactctaacc
tgtggtaccatatataaactgctagttatgtggggtcatccattagagca
tactcaacctactaggaaacatattcttaaataaacaaatctaactcttt
cccctttagaagtcatccactgtccacgctagactgtcattggaaacatt
ttcctttgccttttgctcctgagactaggtctcactacacagctcaggct
gacctgagattcacaatgctaagcaggctgccactttggttagcctgata
cagtgctgtgagacaggtactattatagtccaccatttaaagatgagaaa
acatggattggtgagtatagcattcacaagccgctcatcaagtctgggga
agcaaggctgggttgcataggcctgtaacctgtgttatgaggcaggcctc
tatgttctgatagctccctaactccctcctgctctagggcatccttaaca
attgtgactgtaagtccttcattttaattttatacagagccaggtaactt
cgtgggtagcactgacttggattagagggctgtgctatgaactgcatttt
tctgctgactttgcaactctaaatgaagccgcagaagaagaaaatgaact
tcggaaacaagttgccactattagccagagaaccct
gaattcatcagcctggttgttttcaataaggataagaggcccttacgatg
ctaaaagcattagacttcagagaaagaagaggcgaagtcaggtaagctag
gggtgaaaaggaaaagatgtgttcagtgggacaaatactcagggccatga
aggctgcttcagctcggcctaatgccgtctcaggtggccgtcattgactt
gcctctgtacgctcttagaagctgcagaccttttccacttgccagagtat
gtcttcaattttacgccatgcaagaagcaccataggcaggcgtttgctta
gatgggtgctggatacatccagatggttctctggttgttgggaaaagtgc
taagcctgaccagagagttatctcctcaccacagaagggaaaaaccaatc
caggggcaagcgtgcaactgagtatcctccccaagataaagtctacttcc
tgagagaaacactcacttcttcttgagaaactcttgcccaaccagagtca
gtgactgggttagaaaacaaaggcctttgttttcttcctctatattcagg
gtcctgttttctctttacttcctccagcttgtacacccttccccagagta
agagtggcatgctggtgggaggtggggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_67310151_67311299
seq2: B6Ng01-121N16.b_48_1183 (reverse)

seq1  AGGGTTCTCTGTGCTCATTTAGTTGGGCAACTTTGTTTCCG-AGTTCATT  49
      ||||||||||| ||| |  ||||  |||||| ||||||||| ||||||||
seq2  AGGGTTCTCTG-GCTAA--TAGT--GGCAAC-TTGTTTCCGAAGTTCATT  44

seq1  TTCTTTCCTTCTGGCGGCTTCATTTAGAGTTGCAAAAGTCAGCAGAAAAA  99
      |||||  ||||| |||||||||||||||||||| ||||||||||||||||
seq2  TTCTT--CTTCT-GCGGCTTCATTTAGAGTTGC-AAAGTCAGCAGAAAAA  90

seq1  TGGCAGTTCATAGCACAGCCCTCTAATCCAAGGTCAGTGCTACCCCACGA  149
      | ||||||||||||||||||||||||||||| |||||||||| |||||||
seq2  T-GCAGTTCATAGCACAGCCCTCTAATCCAA-GTCAGTGCTA-CCCACGA  137

seq1  AGTTACCTGGCTCTGTATAAAATTAAAATGAAGGACCTTACAGTCAACAA  199
      ||||||||||||||||||||||||||||||||||| ||||||||| ||||
seq2  AGTTACCTGGCTCTGTATAAAATTAAAATGAAGGA-CTTACAGTC-ACAA  185

seq1  TTGTTAAGGATGCCCTAGAGCAGGAGGGAGTTAGGGAGCTATCAGAACAT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTAAGGATGCCCTAGAGCAGGAGGGAGTTAGGGAGCTATCAGAACAT  235

seq1  AGAGGCCTGCCTCATAACACAGGTTACAGGCCTATGCAA-CCAGCCTTGC  298
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  AGAGGCCTGCCTCATAACACAGGTTACAGGCCTATGCAACCCAGCCTTGC  285

seq1  TTCCCCAGACTTGATGAGCGGCTTGTGAATGCTATACTCACCAATCCATG  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCCAGACTTGATGAGCGGCTTGTGAATGCTATACTCACCAATCCATG  335

seq1  TTTTCTCATCTTTAAATGGTGGACTATAATAGTACCTGTCTCACAGCACT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTCATCTTTAAATGGTGGACTATAATAGTACCTGTCTCACAGCACT  385

seq1  GTATCAGGCTAACCAAAGTGGCAGCCTGCTTAGCATTGTGAATCTCAGGT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATCAGGCTAACCAAAGTGGCAGCCTGCTTAGCATTGTGAATCTCAGGT  435

seq1  CAGCCTGAGCTGTGTAGTGAGACCTAGTCTCAGGAGCAAAAGGCAAAGGA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCTGAGCTGTGTAGTGAGACCTAGTCTCAGGAGCAAAAGGCAAAGGA  485

seq1  AAATGTTTCCAATGACAGTCTAGCGTGGACAGTGGATGACTTCTAAAGGG  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTTTCCAATGACAGTCTAGCGTGGACAGTGGATGACTTCTAAAGGG  535

seq1  GAAAGAGTTAGATTTGTTTATTTAAGAATATGTTTCCTAGTAGGTTGAGT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGAGTTAGATTTGTTTATTTAAGAATATGTTTCCTAGTAGGTTGAGT  585

seq1  ATGCTCTAATGGATGACCCCACATAACTAGCAGTTTATATATGGTACCAC  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTCTAATGGATGACCCCACATAACTAGCAGTTTATATATGGTACCAC  635

seq1  AGGTTAGAGTGGGTGGGTTATTTGAAAAGGAGAAGCACAAAGTTGGAGAG  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTAGAGTGGGTGGGTTATTTGAAAAGGAGAAGCACAAAGTTGGAGAG  685

seq1  GTAGGGAGTATATGTGGGAGGAGTTAGGGTTGGGGTGATTATGATAAAAT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGGGAGTATATGTGGGAGGAGTTAGGGTTGGGGTGATTATGATAAAAT  735

seq1  AAAATATTAACAAGTAGTGGGAAAAAAGGAGAAAAAGGAACAAGAAATTT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATATTAACAAGTAGTGGGAAAAAAGGAGAAAAAGGAACAAGAAATTT  785

seq1  GATGCAGTTTACTGAATATTTCCGCCCAAAACACCTCAAGCAACACAGTA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCAGTTTACTGAATATTTCCGCCCAAAACACCTCAAGCAACACAGTA  835

seq1  CAGCCTGGTGCTGTTCCACATGATCACGTGACTACGGGGAGCCGTGGCTG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCTGGTGCTGTTCCACATGATCACGTGACTACGGGGAGCCGTGGCTG  885

seq1  GCCGTGGCCAGCCGTGGCTGACCAGCACAAGGAAAGCATTGTACTGAATA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCGTGGCCAGCCGTGGCTGACCAGCACAAGGAAAGCATTGTACTGAATA  935

seq1  AGGCTAGCCCAGGAAAAGACCAAAGTTAGAATGTCCAGTGAGTGCACATC  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTAGCCCAGGAAAAGACCAAAGTTAGAATGTCCAGTGAGTGCACATC  985

seq1  GCCTTCACATCATGAAGTGGTAAAAGAAAAGAAGAGAAACCCACCTTGGT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTCACATCATGAAGTGGTAAAAGAAAAGAAGAGAAACCCACCTTGGT  1035

seq1  CCTCTGAGGGGCACTGTGATGCACGCGTCTAATTCCAGTTCTCTGGGGAT  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTGAGGGGCACTGTGATGCACGCGTCTAATTCCAGTTCTCTGGGGAT  1085

seq1  GCGGCTGGAGAATCCAGAGATAGAGGCTGTCCAGGACTACATAATGAATT  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGGCTGGAGAATCCAGAGATAGAGGCTGTCCAGGACTACATAATGAATT  1135

seq1  C  1149
      |
seq2  C  1136

seq1: chr10_67158352_67158979
seq2: B6Ng01-121N16.g_69_696

seq1  GAATTCATCAGCCTGGTTGTTTTCAATAAGGATAAGAGGCCCTTACGATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATCAGCCTGGTTGTTTTCAATAAGGATAAGAGGCCCTTACGATG  50

seq1  CTAAAAGCATTAGACTTCAGAGAAAGAAGAGGCGAAGTCAGGTAAGCTAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAAGCATTAGACTTCAGAGAAAGAAGAGGCGAAGTCAGGTAAGCTAG  100

seq1  GGGTGAAAAGGAAAAGATGTGTTCAGTGGGACAAATACTCAGGGCCATGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGAAAAGGAAAAGATGTGTTCAGTGGGACAAATACTCAGGGCCATGA  150

seq1  AGGCTGCTTCAGCTCGGCCTAATGCCGTCTCAGGTGGCCGTCATTGACTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTGCTTCAGCTCGGCCTAATGCCGTCTCAGGTGGCCGTCATTGACTT  200

seq1  GCCTCTGTACGCTCTTAGAAGCTGCAGACCTTTTCCACTTGCCAGAGTAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCTGTACGCTCTTAGAAGCTGCAGACCTTTTCCACTTGCCAGAGTAT  250

seq1  GTCTTCAATTTTACGCCATGCAAGAAGCACCATAGGCAGGCGTTTGCTTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTCAATTTTACGCCATGCAAGAAGCACCATAGGCAGGCGTTTGCTTA  300

seq1  GATGGGTGCTGGATACATCCAGATGGTTCTCTGGTTGTTGGGAAAAGTGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGGTGCTGGATACATCCAGATGGTTCTCTGGTTGTTGGGAAAAGTGC  350

seq1  TAAGCCTGACCAGAGAGTTATCTCCTCACCACAGAAGGGAAAAACCAATC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCCTGACCAGAGAGTTATCTCCTCACCACAGAAGGGAAAAACCAATC  400

seq1  CAGGGGCAAGCGTGCAACTGAGTATCCTCCCCAAGATAAAGTCTACTTCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGGCAAGCGTGCAACTGAGTATCCTCCCCAAGATAAAGTCTACTTCC  450

seq1  TGAGAGAAACACTCACTTCTTCTTGAGAAACTCTTGCCCAACCAGAGTCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAGAAACACTCACTTCTTCTTGAGAAACTCTTGCCCAACCAGAGTCA  500

seq1  GTGACTGGGTTAGAAAACAAAGGCCTTTGTTTTCTTCCTCTATATTCAGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACTGGGTTAGAAAACAAAGGCCTTTGTTTTCTTCCTCTATATTCAGG  550

seq1  GTCCTGTTTTCTCTTTACTTCCTCCAGCTTGTACACCCTTCCCCAGAGTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTGTTTTCTCTTTACTTCCTCCAGCTTGTACACCCTTCCCCAGAGTA  600

seq1  AGAGTGGCATGCTGGTGGGAGGTGGGGG  628
      ||||||||||||||||||||||||||||
seq2  AGAGTGGCATGCTGGTGGGAGGTGGGGG  628