BAC Information

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BAC

Clone NameB6Ng01-122H18
Chromosome10 (Build37)
Map Location 126,751,153 - 126,858,988
singlet/doubletdoublet
Overlap geneLOC622075, Arhgap9, Gli1, Inhbe, Inhbc, R3hdm2
Upstream geneLOC668336, Xrcc6bp1, LOC622567, Ctdsp2, Avil, Tsfm, Mettl1, Cyp27b1, March9, Cdk4, Tspan31, Centg1, Os9, LOC100043028, B4galnt1, LOC100043035, C78409, D10Ertd610e, Dtx3, Pip5k2c, Kif5a, Dctn2, Mbd6, LOC100043045, Ddit3, Mars
Downstream geneStac3, Ndufa4l2, Shmt2, Nxph4, Lrp1, LOC100043054, Stat6, Nab2, BC030440, Myo1a, Tac2, Zbtb39, Admr, Rdh1, Rdh9, Rdh16, AY053573, Rdhs, BC089597, Rdh7, Sdro, LOC382468, Hsd17b6, LOC100043618, Prim1, LOC100043077, Naca, Ptges3, Atp5b, Baz2a, LOC100043085, Rbms2, LOC100043624, Gls2, Spryd4, Mip, Timeless, Apon, Apof, Stat2, Il23a, Usp52, Tmem4, Cs, Coq10a, Ankrd52, Slc39a5, Obfc2b, Rnf41
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-122H18.bB6Ng01-122H18.g
ACCDH925895DH925896
length1,233969
definitionDH925895|Mus musculus domesticus DNA, BAC clone: B6Ng01-122H18, 5' end.DH925896|Mus musculus domesticus DNA, BAC clone: B6Ng01-122H18, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(126,857,735 - 126,858,988)(126,751,153 - 126,752,126)
sequence
gaattctgaataatggcagtacaaaacaagaaataaatcaagacagaaaa
taaacaggcatgttgttaaaggaacaagttggcatgtgctatccaaatat
gcatgctttatacacaaggcggctttagcttttcctaggctctagtctac
tgagttcttcaaactgacctccgcaggtcccttcagagatcatctatatt
aaaatggacaggcttaaaaggaactgaaagcacaaatagaatccaaaact
aaccatctagggctgttaaagctcacaactaggtttatacctcgcaaatc
cttcctaacctttgctttagctatacagattcaaaattaaattttactct
gaactacaatggcaaggacttttatataactgcctattttgaggtctgga
aaacagcacacaaagtgaccaggaccagtataaatacagaaaaatcccac
actccaaaactcaaatttaaattaacagcttctgggttctaaaaccttca
tgagctcgttttccttctacatttagaaatagcaattaggtaaaattcat
tagcatcagcactcacggggttaaattcaagcaccttgcttcagcgatcc
gactctggtctaagcctgctgtgaggagaaacaagcacaggtaccctatg
gctaaacatcccactccagcctcagctccagtcagtggtgcccagccggc
agcgagtcacaaagacttcagatccatttttcttcttccttctctctgac
ccctccctcacagaagaaaaagactgcaaacaaaataatacgtcactgga
ggcagagggaatcccatctctgcactctttagaaaccagagccagcaaac
aaaaacaagccaattatagggaacaaacaagccacccaaaattaacagtg
gcaaacccagagaatacatcaacagcatttgtaggaaaacagtttagcaa
attctcccagatgcttgtaaacacaaaggctctggagatgcgacaaagcg
acatatttcttcttaacacatctgatgagtagggacagttacataaagac
acaggacacagaggcacagtcacagtcgggcatgaggagagcttggtatg
acccagtgaagaatttataggatccttgctcttgcattggtgcgtcaacg
catcacaagagaaacgaaattccaagtgattcctagcatttgaatggagc
attgctaaaataatcatggaaagaagtgaaatc
ctatagcaacagggtggtgggcctcatgggctacatgacctccaaagagt
aagaaaccctgggccacccaccccagcaaggacactgagagcaagagaga
ggccctcggttgctgaggagtccctgtcccaactcgggacactgagcatc
cccctcacagtttccattccagcccccaaagatgatggaagaggcttagg
gagtcttactctctttgaataccatcaataaagctcactgtccccttccc
aaaaacaaacaaacaaaaccaacaaaaaccagtatgtgtgtatgcacaag
gtgggcacacagctgtggtgcttgtgtggaggtcagaagataactttgta
gagttggtactcacctttctttgcttttgttttgtttttttgagccacag
tctttacattttgtagctcagactttcctagaacttgctaggcaaaccac
gatggtctggcccttacagcaatagacttgcctgggcttcccaagtgctg
gcatcaaaggcatgtaccagcacacgaggctcatcttctatctctgtgtg
ggtctccaggacttcactgctagcatcttttcctgataagccatctggct
ggctccaaaaccaatacagggtggctagctgtagtggcacatgtttcttt
ttaaggcttttttttttttttttttaagatttatgagcgaggggggtggt
ggcacacgcctttaatcccagcactcgggaggcagaggcaggcggatttc
tgagttcgaggccagcctggtctacagagtgagttccaagacagccaggc
tatacagaagaaccctgtctcgaaaaaaaaaaaacaacaaacaagcaacc
catattatctattaatatatggtaagtacattgtagctgcctcaagatgt
gccagagagtgcatcagatctcattacagtggttgtgagtcatcatgtgg
gtgctggatttggaactca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_126857735_126858988
seq2: B6Ng01-122H18.b_49_1281 (reverse)

seq1  GATTTCTACTTC-TTCCATGATTATTTTAAGCAATGCCTCATTCAGATTT  49
      |||||| ||||| ||||||||||||||| ||||||||  |||||| |   
seq2  GATTTC-ACTTCTTTCCATGATTATTTT-AGCAATGCTCCATTCAAA---  45

seq1  TGCTTATGAGAATCAC-TGTGATTTCTGTTCTCTTTGGTGATGCTGTTGA  98
      |||   |  ||||||| ||  |||||  |||||||  ||||||| |||||
seq2  TGC---TAGGAATCACTTGGAATTTCGTTTCTCTT--GTGATGC-GTTGA  89

seq1  CGCA-CATTGCAGGAAGCAGGGAATCCCCTATAAATATCCTTCACTGTGT  147
      |||| || |||| | |||| |||    |||||||  || |||||||| ||
seq2  CGCACCAATGCAAG-AGCAAGGA---TCCTATAA--ATTCTTCACTGGGT  133

seq1  CATTACCCAGCTCTCCCTCCATGCCCGACTGGTGACTGTGCCTCTGTGTC  197
      || |||| ||||||||   ||||||||||| |||||||||||||||||||
seq2  CA-TACCAAGCTCTCC--TCATGCCCGACT-GTGACTGTGCCTCTGTGTC  179

seq1  CTGTGTCTTTATGTAACTGTCCCTACTCATCAGATGTGTTAAGGAGAAAT  247
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  CTGTGTCTTTATGTAACTGTCCCTACTCATCAGATGTGTTAAGAAGAAAT  229

seq1  ATGTCGCCTTTGTCGCATCTCCAGAGCCTTTGTGTTTACAAGCATCTGGG  297
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCG-CTTTGTCGCATCTCCAGAGCCTTTGTGTTTACAAGCATCTGGG  278

seq1  AGAATTTTGCTAAACTGTTTTCCTACAAATGCTGTTTGATGTATTCTCTG  347
      |||| ||||||||||||||||||||||||||||| |||||||||||||||
seq2  AGAA-TTTGCTAAACTGTTTTCCTACAAATGCTG-TTGATGTATTCTCTG  326

seq1  GGTTTGCCACTGTTAATTTTGGGTGGCTTGTTTGTTCCTTATAATTGGCT  397
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  GGTTTGCCACTGTTAATTTTGGGTGGCTTGTTTGTTCCCTATAATTGGCT  376

seq1  TGTTTTTGTTTGCTGGCTCTGGTTTCTAAAGAGTGCAGAGATGGGATTCC  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTTGTTTGCTGGCTCTGGTTTCTAAAGAGTGCAGAGATGGGATTCC  426

seq1  CTCTGCCTCCAGTGACGTATTATTTTGTTTGCAGTCTTTTTCTTCTGTGA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGCCTCCAGTGACGTATTATTTTGTTTGCAGTCTTTTTCTTCTGTGA  476

seq1  GGGAGGGGTCAGAGAGAAGGAAGAAGAAAAATGGATCTGAAGTCTTTGTG  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGGGGTCAGAGAGAAGGAAGAAGAAAAATGGATCTGAAGTCTTTGTG  526

seq1  ACTCGCTGCCGGCTGGGCACCACTGACTGGAGCTGAGGCTGGAGTGGGAT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCGCTGCCGGCTGGGCACCACTGACTGGAGCTGAGGCTGGAGTGGGAT  576

seq1  GTTTAGCCATAGGGTACCTGTGCTTGTTTCTCCTCACAGCAGGCTTAGAC  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTAGCCATAGGGTACCTGTGCTTGTTTCTCCTCACAGCAGGCTTAGAC  626

seq1  CAGAGTCGGATCGCTGAAGCAAGGTGCTTGAATTTAACCCCGTGAGTGCT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGTCGGATCGCTGAAGCAAGGTGCTTGAATTTAACCCCGTGAGTGCT  676

seq1  GATGCTAATGAATTTTACCTAATTGCTATTTCTAAATGTAGAAGGAAAAC  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCTAATGAATTTTACCTAATTGCTATTTCTAAATGTAGAAGGAAAAC  726

seq1  GAGCTCATGAAGGTTTTAGAACCCAGAAGCTGTTAATTTAAATTTGAGTT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTCATGAAGGTTTTAGAACCCAGAAGCTGTTAATTTAAATTTGAGTT  776

seq1  TTGGAGTGTGGGATTTTTCTGTATTTATACTGGTCCTGGTCACTTTGTGT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAGTGTGGGATTTTTCTGTATTTATACTGGTCCTGGTCACTTTGTGT  826

seq1  GCTGTTTTCCAGACCTCAAAATAGGCAGTTATATAAAAGTCCTTGCCATT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTTTTCCAGACCTCAAAATAGGCAGTTATATAAAAGTCCTTGCCATT  876

seq1  GTAGTTCAGAGTAAAATTTAATTTTGAATCTGTATAGCTAAAGCAAAGGT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTTCAGAGTAAAATTTAATTTTGAATCTGTATAGCTAAAGCAAAGGT  926

seq1  TAGGAAGGATTTGCGAGGTATAAACCTAGTTGTGAGCTTTAACAGCCCTA  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGAAGGATTTGCGAGGTATAAACCTAGTTGTGAGCTTTAACAGCCCTA  976

seq1  GATGGTTAGTTTTGGATTCTATTTGTGCTTTCAGTTCCTTTTAAGCCTGT  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGTTAGTTTTGGATTCTATTTGTGCTTTCAGTTCCTTTTAAGCCTGT  1026

seq1  CCATTTTAATATAGATGATCTCTGAAGGGACCTGCGGAGGTCAGTTTGAA  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTTTAATATAGATGATCTCTGAAGGGACCTGCGGAGGTCAGTTTGAA  1076

seq1  GAACTCAGTAGACTAGAGCCTAGGAAAAGCTAAAGCCGCCTTGTGTATAA  1147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTCAGTAGACTAGAGCCTAGGAAAAGCTAAAGCCGCCTTGTGTATAA  1126

seq1  AGCATGCATATTTGGATAGCACATGCCAACTTGTTCCTTTAACAACATGC  1197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATGCATATTTGGATAGCACATGCCAACTTGTTCCTTTAACAACATGC  1176

seq1  CTGTTTATTTTCTGTCTTGATTTATTTCTTGTTTTGTACTGCCATTATTC  1247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTTATTTTCTGTCTTGATTTATTTCTTGTTTTGTACTGCCATTATTC  1226

seq1  AGAATTC  1254
      |||||||
seq2  AGAATTC  1233

seq1: chr10_126751153_126752126
seq2: B6Ng01-122H18.g_77_1045

seq1  CTATAGCAACAGGGTGGTGGGCCTCATGGGCTACATGACCTCCAAAGAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATAGCAACAGGGTGGTGGGCCTCATGGGCTACATGACCTCCAAAGAGT  50

seq1  AAGAAACCCTGGGCCACCCACCCCAGCAAGGACACTGAGAGCAAGAGAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAACCCTGGGCCACCCACCCCAGCAAGGACACTGAGAGCAAGAGAGA  100

seq1  GGCCCTCGGTTGCTGAGGAGTCCCTGTCCCAACTCGGGACACTGAGCATC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCCTCGGTTGCTGAGGAGTCCCTGTCCCAACTCGGGACACTGAGCATC  150

seq1  CCCCTCACAGTTTCCATTCCAGCCCCCAAAGATGATGGAAGAGGCTTAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTCACAGTTTCCATTCCAGCCCCCAAAGATGATGGAAGAGGCTTAGG  200

seq1  GAGTCTTACTCTCTTTGAATACCATCAATAAAGCTCACTGTCCCCTTCCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCTTACTCTCTTTGAATACCATCAATAAAGCTCACTGTCCCCTTCCC  250

seq1  AAAAACAAACAAACAAAACCAACAAAAACCAGTATGTGTGTATGCACAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACAAACAAACAAAACCAACAAAAACCAGTATGTGTGTATGCACAAG  300

seq1  GTGGGCACACAGCTGTGGTGCTTGTGTGGAGGTCAGAAGATAACTTTGTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGCACACAGCTGTGGTGCTTGTGTGGAGGTCAGAAGATAACTTTGTA  350

seq1  GAGTTGGTACTCACCTTTCTTTGCTTTTGTTTTGTTTTTTTGAGCCACAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTGGTACTCACCTTTCTTTGCTTTTGTTTTGTTTTTTTGAGCCACAG  400

seq1  TCTTTACATTTTGTAGCTCAGACTTTCCTAGAACTTGCTAGGCAAACCAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTACATTTTGTAGCTCAGACTTTCCTAGAACTTGCTAGGCAAACCAC  450

seq1  GATGGTCTGGCCCTTACAGCAATAGACTTGCCTGGGCTTCCCAAGTGCTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGTCTGGCCCTTACAGCAATAGACTTGCCTGGGCTTCCCAAGTGCTG  500

seq1  GCATCAAAGGCATGTACCAGCACACGAGGCTCATCTTCTATCTCTGTGTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCAAAGGCATGTACCAGCACACGAGGCTCATCTTCTATCTCTGTGTG  550

seq1  GGTCTCCAGGACTTCACTGCTAGCATCTTTTCCTGATAAGCCATCTGGCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTCCAGGACTTCACTGCTAGCATCTTTTCCTGATAAGCCATCTGGCT  600

seq1  GGCTCCAAAACCAATACAGGGTGGCTAGCTGTAGTGGCACATGTTTCTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCCAAAACCAATACAGGGTGGCTAGCTGTAGTGGCACATGTTTCTTT  650

seq1  TTAAGGC-TTTTTTTTTTTTTTTTTAAGATTTATGAGCGA-GGGGGTGGT  698
      ||||||| |||||||||||||||||||||||||||||||| |||||||||
seq2  TTAAGGCTTTTTTTTTTTTTTTTTTAAGATTTATGAGCGAGGGGGGTGGT  700

seq1  GGCACACGCCTTTAATCCCAGCACTCGGGAGGCAGAGGCAGGCGGATTTC  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCACACGCCTTTAATCCCAGCACTCGGGAGGCAGAGGCAGGCGGATTTC  750

seq1  TGAGTTCGAGGCCAGCCTGGTCTACAGAGTGAGTTCCAGGACAGCCAGGG  798
      |||||||||||||||||||||||||||||||||||||| |||||||| ||
seq2  TGAGTTCGAGGCCAGCCTGGTCTACAGAGTGAGTTCCAAGACAGCCA-GG  799

seq1  CTATACAGAGAAACCCTGTCTCGAAAAAAAAAAAAACAAACAAACAAGCA  848
      |||||||||  ||||||||||||||||||||||||   ||||||||||| 
seq2  CTATACAGAAGAACCCTGTCTCGAAAAAAAAAAAA--CAACAAACAAGC-  846

seq1  AACCAATATTTATCTATTTATTATAT-GTAAGTACATTGTAGCTGTCTTC  897
      |||| ||| ||||||| ||| ||||| |||||||||||||||||| ||  
seq2  AACCCATA-TTATCTA-TTAATATATGGTAAGTACATTGTAGCTGCCTCA  894

seq1  AGATGTGCCAGAAGAGTGCATCAGATCTCATTACAGGTGGTTGTGAGTCA  947
      ||||||||||| ||||||||||||||||||||||| ||||||||||||||
seq2  AGATGTGCCAG-AGAGTGCATCAGATCTCATTACA-GTGGTTGTGAGTCA  942

seq1  TCATGTGGTTGCTGGGATTTGAACTCA  974
      |||||||| ||||||  || |||||||
seq2  TCATGTGGGTGCTGGATTTGGAACTCA  969