BAC Information

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BAC

Clone NameB6Ng01-122N17
Chromosome10 (Build37)
Map Location 72,128,116 - 72,129,288
singlet/doubletsinglet
Overlap geneZwint
Upstream geneEG216082, LOC622812, EG327767, 1700049L16Rik, LOC100040505
Downstream geneLOC432471, LOC544705, LOC100039981
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-122N17.bB6Ng01-122N17.g
ACCDH926176DH926177
length1,1841,133
definitionDH926176|Mus musculus domesticus DNA, BAC clone: B6Ng01-122N17, 5' end.DH926177|Mus musculus domesticus DNA, BAC clone: B6Ng01-122N17, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagtgatcaagttcttaaactcttgcttcattatatcttcctaaa
tcagattaagtcttaaaataacagaccatcaatggctctgatggtgtgac
tgctttccaagtgtctctgcccagtgtccatcaaaagattacatttgata
tttatttacatactagggttatttttatttttaataaaatcacctttaaa
ctatttctctgcacccacatcctcggattttctggttctaagcaacagaa
ctgctgagtaccaaggacaaacttccctttgatgagtctagcatgtcagg
gagagcagctgcctgcacactgaggaatgcagatgtggggagatggcctc
catctggaggttcagcagggcacctccccgacagagccccagctacacgc
ttgtctgcttgcatttcccactaatgtcctgtggcaaacttgaacaccaa
ggtcaagcaaagacacaggtatcactactccctcaaagtcttctgtcagc
aaccaagacaagaggatttctaggaaaggaagaaaggcagcttgacagca
gcggtctgcagctctccgaggctacagcaacatcgtccttaggagactgt
ggtgtgtcctggtgttagcttttattattccatcatagtttctctttgga
cacaaggcacagtgtcttaagaggtgtgagaggccagtaagaccctgcct
agataaattttgtccaatcagacaaggctttgctggctttcaattcgcca
tacaatattgatagcgctgttttcccatcagaaattcaggaagtgcacac
ttgttagctcttcttacatctatccacattttactgtctatcactcctcc
caaaagtactaccctgattcaatcaacaataaccttttgcctcataaaac
ttttttttaatccacgtagcagctttaagttcgtttaaatcacatacaca
cagttgtctcgttaagaatccttgctagcttcttagcacaagaataaaat
ctaaactgccaagcgcagttccacaaagcttacttcttgacccagctgtg
gggcactttcaggcagtatttcatgtcctccatctacttattcttgctct
ccacctttaggcttctaactggttcccaaggtacaaaggtgctctcctgg
gtctcaggctacctggactttcaattcctccttc
gaattctcacctgaggagtaccaaatggctgagaagcacctgaaaaaatg
ttcagcatccttaatcatcagagaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaagtgacagc
agatgctggtgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaagcttttacaaccactctggaaatcagtctggcggttcctca
gaaaactggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgtcccaaccggtaagaaggacacatgctccactat
gttcatagcagccttaattataatagccagaagctggaaagaacccagat
gcccctcaacataggaatggatacagaaaatatggtacatctacacaatg
gagtactactcagctattaaaaaatgaatttatgaaattcctaggcaaat
ggatggacctggagggcatcatcctgagtgaggtaacccaatcacaaagg
aactcgcacaatatgtactcactgataagtgaatattagcccagaaactt
aggatacccaagatataagatacaatttgctaaatgcatgtaactcaaga
agaacgaagaccaaagtgtggacactttgccccttcttagaattgggaac
aaaacacccatggaaggagttacagaaacaaagtttggagctgtgtcaaa
acgatggaccatctagagactgccatatccagggttccatcccataatca
gcttccaaatgctgacaccattgcatatactagcaagattttgctgaaag
gacccaaatatagctgtctcttgtgagactaggccagggcctagcaaaca
cataagtggatgctcacagtcagctattgatggatcacagggccccaatg
agagctagggaaagtactcagagctgatgacctgcagccctatagtagaa
cacattatgaactacagtaccctgtagctcttgtctctagctgcatatgt
atcaaagatgctattggcatcactgaagagccattgacttgcaactttat
tgtcccagtacaggaaatcagggctcaaaattg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_72128116_72129288
seq2: B6Ng01-122N17.b_49_1232 (reverse)

seq1  GAAGGAGGAGATATGAAAG--CA-GTAGCCTTGAGA--CAGGAGAGCA-C  44
      ||||||||| || ||||||  || |||||| |||||  |||||||||| |
seq2  GAAGGAGGA-AT-TGAAAGTCCAGGTAGCC-TGAGACCCAGGAGAGCACC  47

seq1  TTTGTACCTTTGGGACCAGTTAGAAGGCTAAGGGT-GAGAGC-AGAATAA  92
      |||||||||| || |||||||||||| |||| ||| |||||| |||||||
seq2  TTTGTACCTTGGGAACCAGTTAGAAGCCTAAAGGTGGAGAGCAAGAATAA  97

seq1  GTAGATGAGGAACATGAAATACTGCCTG-AAGTG-CTCACAGCTGGGTCA  140
      |||||||  | ||||||||||||||||| ||||| | |||||||||||||
seq2  GTAGATGGAGGACATGAAATACTGCCTGAAAGTGCCCCACAGCTGGGTCA  147

seq1  --GAGTAGGCTTTGTGG-ACTGCGCTTGGCAGTTTAGATTTTATTC-TGT  186
         |||| ||||||||| |||||||||||||||||||||||||||| |||
seq2  AGAAGTAAGCTTTGTGGAACTGCGCTTGGCAGTTTAGATTTTATTCTTGT  197

seq1  GCTAAGAAGCTAGCAAGGATTCTTAACGAGACAACTGTGTGTATGTGATT  236
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAAGAAGCTAGCAAGGATTCTTAACGAGACAACTGTGTGTATGTGATT  247

seq1  TAAACGAACTTAAAGCTGCTACGTGGATTAAAAAAAAGTTTTATGAGGCA  286
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACGAACTTAAAGCTGCTACGTGGATTAAAAAAAAGTTTTATGAGGCA  297

seq1  AAAGGTTATTGTTGATTGAATCAGGGTAGTACTTTTGGGAGGAGTGATAG  336
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGTTATTGTTGATTGAATCAGGGTAGTACTTTTGGGAGGAGTGATAG  347

seq1  ACAGTAAAATGTGGATAGATGTAAGAAGAGCTAACAAGTGTGCACTTCCT  386
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTAAAATGTGGATAGATGTAAGAAGAGCTAACAAGTGTGCACTTCCT  397

seq1  GAATTTCTGATGGGAAAACAGCGCTATCAATATTGTATGGCGAATTGAAA  436
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTTCTGATGGGAAAACAGCGCTATCAATATTGTATGGCGAATTGAAA  447

seq1  GCCAGCAAAGCCTTGTCTGATTGGACAAAATTTATCTAGGCAGGGTCTTA  486
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGCAAAGCCTTGTCTGATTGGACAAAATTTATCTAGGCAGGGTCTTA  497

seq1  CTGGCCTCTCACACCTCTTAAGACACTGTGCCTTGTGTCCAAAGAGAAAC  536
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCCTCTCACACCTCTTAAGACACTGTGCCTTGTGTCCAAAGAGAAAC  547

seq1  TATGATGGAATAATAAAAGCTAACACCAGGACACACCACAGTCTCCTAAG  586
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGATGGAATAATAAAAGCTAACACCAGGACACACCACAGTCTCCTAAG  597

seq1  GACGATGTTGCTGTAGCCTCGGAGAGCTGCAGACCGCTGCTGTCAAGCTG  636
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACGATGTTGCTGTAGCCTCGGAGAGCTGCAGACCGCTGCTGTCAAGCTG  647

seq1  CCTTTCTTCCTTTCCTAGAAATCCTCTTGTCTTGGTTGCTGACAGAAGAC  686
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTCTTCCTTTCCTAGAAATCCTCTTGTCTTGGTTGCTGACAGAAGAC  697

seq1  TTTGAGGGAGTAGTGATACCTGTGTCTTTGCTTGACCTTGGTGTTCAAGT  736
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAGGGAGTAGTGATACCTGTGTCTTTGCTTGACCTTGGTGTTCAAGT  747

seq1  TTGCCACAGGACATTAGTGGGAAATGCAAGCAGACAAGCGTGTAGCTGGG  786
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCACAGGACATTAGTGGGAAATGCAAGCAGACAAGCGTGTAGCTGGG  797

seq1  GCTCTGTCGGGGAGGTGCCCTGCTGAACCTCCAGATGGAGGCCATCTCCC  836
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTGTCGGGGAGGTGCCCTGCTGAACCTCCAGATGGAGGCCATCTCCC  847

seq1  CACATCTGCATTCCTCAGTGTGCAGGCAGCTGCTCTCCCTGACATGCTAG  886
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATCTGCATTCCTCAGTGTGCAGGCAGCTGCTCTCCCTGACATGCTAG  897

seq1  ACTCATCAAAGGGAAGTTTGTCCTTGGTACTCAGCAGTTCTGTTGCTTAG  936
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCATCAAAGGGAAGTTTGTCCTTGGTACTCAGCAGTTCTGTTGCTTAG  947

seq1  AACCAGAAAATCCGAGGATGTGGGTGCAGAGAAATAGTTTAAAGGTGATT  986
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCAGAAAATCCGAGGATGTGGGTGCAGAGAAATAGTTTAAAGGTGATT  997

seq1  TTATTAAAAATAAAAATAACCCTAGTATGTAAATAAATATCAAATGTAAT  1036
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTAAAAATAAAAATAACCCTAGTATGTAAATAAATATCAAATGTAAT  1047

seq1  CTTTTGATGGACACTGGGCAGAGACACTTGGAAAGCAGTCACACCATCAG  1086
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTGATGGACACTGGGCAGAGACACTTGGAAAGCAGTCACACCATCAG  1097

seq1  AGCCATTGATGGTCTGTTATTTTAAGACTTAATCTGATTTAGGAAGATAT  1136
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCATTGATGGTCTGTTATTTTAAGACTTAATCTGATTTAGGAAGATAT  1147

seq1  AATGAAGCAAGAGTTTAAGAACTTGATCACTGAATTC  1173
      |||||||||||||||||||||||||||||||||||||
seq2  AATGAAGCAAGAGTTTAAGAACTTGATCACTGAATTC  1184