BAC Information

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BAC

Clone NameB6Ng01-122N19
Chromosome10 (Build37)
Map Location 81,708,953 - 81,710,098
singlet/doubletsinglet
Overlap genenone
Upstream geneMatk, Mrpl54, Apba3, Tjp3, Pip5k1c, 2510012J08Rik, Tbxa2r, Gipc3, Hmg20b, F630110N24Rik, 4930404N11Rik, Fzr1, Dohh, 2210404O07Rik, Nfic, Brunol5, Ncln, Edg6, Gna15, Gna11, Aes, Tle2, Tle6, BC025920, Sirt6, Ankrd24, LOC100040916, EG666448, EG666458, LOC666711, LOC382388, LOC100040944, EG210583, EG666738, EG666501, 1700123A16Rik, LOC666753, EG666537, BC062127, EG666542, EG666548, EG666790, LOC666571, AL117821, BC062115, 4933439G19Rik, BC024063, AU041133, LOC100042712, B230315N10Rik
Downstream geneLOC100042718, EG237412, LOC666611, Gm1553, LOC544716, 1190007I07Rik, Tdg, Glt8d2, Hcfc2, Nfyb, 1700028I16Rik, Txnrd1, Eid3, EG216185, Chst11, Slc41a2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-122N19.bB6Ng01-122N19.g
ACCDH926180DH926181
length1,139928
definitionDH926180|Mus musculus domesticus DNA, BAC clone: B6Ng01-122N19, 5' end.DH926181|Mus musculus domesticus DNA, BAC clone: B6Ng01-122N19, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttaactgaggaattctgaattgcaagaagcacctaaaatgatcc
agaaagacctttataactttttgataatcaactaacagttgtttggaaca
ggttggtggataaattgttgccagaactaagactacattagaaaagaaca
tttggacattaactgatgtgcacagatcagggccttgtgttaactcaatc
acatcaccattattaacagagtagggagctgttctattctcacaatcttc
acagacaaacaagaataaatcataattctaactttcttattctggctctg
ggaacacattcatcacaggcaaagctgaagtaaagacgtccaacagcaaa
gccaagaatgcaaatgcaaggcaaaagtgaaccaagcattacctcaggaa
agaccaggagattctgcacgaatatccccatagtaccttgccatgtaggg
acctaactcctcgggtcttgcttacataaggggatcagcctgcattacac
tcatgacatttcccggcagaggcttggtcacctgcaaggcatctcttctt
tacatcacccctttgcttgaaagtccaatgggatgctccatactgtttcc
atacacctggtatgtcctacttgtattatatagctggctcctcttccctc
ctcagtatcactactgtcacagatcatgtaactgtgggcagtgtatttgg
ctttattcaagttccattattgaagcacagggaggacattaagattactg
gctcaggacagatcttatgaaggaagaaaggccttaagagataggtacaa
gaagagcttcttcttatcttccaacgagaacaagtggcaactgttagaag
cattaaattcttcagaaatcctgaaatgttcaaggatctatagatttgag
aaatatacattgtgtgccagagattttcctgtgttgattgactgtttcaa
gattctggagtacaataattttaagtcaaatgtttctcaatgcttacatc
tagcacagtagtggggaaactgaggcaggaggtttctctactcccctgct
attacacacacaactcagcactatcacatgcacaaggtacatggagtgtg
tcaggacagattgccaagtttatttttttcctcactttt
gaattcagtgggcccagaaatgagagatgtgatcctccttttctgttttc
ttctaaaagcacttggagacttcatttgaatgtctgtgatatggaataaa
tgtgtggagcacccagaattatataaatatattctcagtgaaatgtacat
ttgcagtgcagtcattctcaccatttctattatgtacatgtgtgggatat
tttaggctgcggtgacctatgaagatgtgcatgtgaacttcactcatgaa
gaatgggctttgctggattcttcccagaagagtctctacaaagatgtgat
gctggaaacgtgcaggaacctcactgctataggtaagatgtaaagaagag
gacaagtgtttcttggttattggtgcacctctgtgatttctcttgtgaca
gaggaagaatgtggtaaatataaatactcagacatggttctcatgttcac
cagagactaacttaaaatttgcacagtatcaaataatacatcataaattt
tgtggtactgtattttagggtacagattggaagaccacaatattgaagaa
cactgtcaaagttctagaagacctgggaggtaatttttatgtgcaagcta
atacaaatgcatcactgtagacattttaatgtaccttgaagttttaatga
aaatcaacagtgtgaacagctttaagtatcctgatgattagtgaattctc
aaaagaccatgtacttggatttcaggtagctggccagtgtttgcaaggca
ttcctttaaggaaaaggagaaataatatcttagccaggcagtggtggtgc
atgccttttaatcacagcacttgggaggcagaggcagtggatttctgatt
ttgaggccagcctgttctacagagtgagttccaggacagcctgggcctac
agagataaccttgtcttcaatacttaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_81708953_81710098
seq2: B6Ng01-122N19.b_48_1186 (reverse)

seq1  AAAAGTGAAG-GAGAAATAAACTTTTGCAAATCTGTCCCTGACACACT-C  48
      |||||||| |  | ||||||||  |||  ||||||| ||||||||||| |
seq2  AAAAGTGAGGAAAAAAATAAAC--TTGGCAATCTGT-CCTGACACACTCC  47

seq1  ATGTACCCTGGTGCCTGTGATAGTGCTGGAGTTGTGTGTGTAATAGCAGG  98
      ||||| ||| |||| |||||||||||| ||||||||||||||||||||||
seq2  ATGTA-CCTTGTGCATGTGATAGTGCT-GAGTTGTGTGTGTAATAGCAGG  95

seq1  GGAGTTAGAGAAACCTCCCTGCCTCAGTTTCCCCAACTACTGGTGCTAGA  148
      |||| ||||||||||| ||||||||||||||||| |||||| ||||||||
seq2  GGAG-TAGAGAAACCT-CCTGCCTCAGTTTCCCC-ACTACT-GTGCTAGA  141

seq1  TGTAAGCATTGAGAAACATTTGACTTAAAATTATTGTACTCCAGAATCTT  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAGCATTGAGAAACATTTGACTTAAAATTATTGTACTCCAGAATCTT  191

seq1  GAAAACAGTCAATCAACACAGGAAAATCTCTGGCACACAATGTATATTTC  248
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  G-AAACAGTCAATCAACACAGGAAAATCTCTGGCACACAATGTATATTTC  240

seq1  TCAAATCTATAGATCCTTGAACATTTCAGGATTTCTGAAGAATTTAATGC  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAATCTATAGATCCTTGAACATTTCAGGATTTCTGAAGAATTTAATGC  290

seq1  TTCTAACAGTTGCCACTTGTTCTCGTTGGAAGATAAGAAGAAGCTCTTCT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAACAGTTGCCACTTGTTCTCGTTGGAAGATAAGAAGAAGCTCTTCT  340

seq1  TGTACCTATCTCTTAAGGCC-TTCTTCCTTCATAAGATCTGTCCTGAGCC  397
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  TGTACCTATCTCTTAAGGCCTTTCTTCCTTCATAAGATCTGTCCTGAGCC  390

seq1  AGTAATCTTAATGTCCTCCCTGTGCTTCAATAATGGAACTTGAATAAAGC  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAATCTTAATGTCCTCCCTGTGCTTCAATAATGGAACTTGAATAAAGC  440

seq1  CAAATACACTGCCCACAGTTACATGATCTGTGACAGTAGTGATACTGAGG  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATACACTGCCCACAGTTACATGATCTGTGACAGTAGTGATACTGAGG  490

seq1  AGGGAAGAGGAGCCAGCTATATAATACAAGTAGGACATACCAGGTGTATG  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAAGAGGAGCCAGCTATATAATACAAGTAGGACATACCAGGTGTATG  540

seq1  GAAACAGTATGGAGCATCCCATTGGACTTTCAAGCAAAGGGGTGATGTAA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACAGTATGGAGCATCCCATTGGACTTTCAAGCAAAGGGGTGATGTAA  590

seq1  AGAAGAGATGCCTTGCAGGTGACCAAGCCTCTGCCGGGAAATGTCATGAG  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGAGATGCCTTGCAGGTGACCAAGCCTCTGCCGGGAAATGTCATGAG  640

seq1  TGTAATGCAGGCTGATCCCCTTATGTAAGCAAGACCCGAGGAGTTAGGTC  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAATGCAGGCTGATCCCCTTATGTAAGCAAGACCCGAGGAGTTAGGTC  690

seq1  CCTACATGGCAAGGTACTATGGGGATATTCGTGCAGAATCTCCTGGTCTT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTACATGGCAAGGTACTATGGGGATATTCGTGCAGAATCTCCTGGTCTT  740

seq1  TCCTGAGGTAATGCTTGGTTCACTTTTGCCTTGCATTTGCATTCTTGGCT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGAGGTAATGCTTGGTTCACTTTTGCCTTGCATTTGCATTCTTGGCT  790

seq1  TTGCTGTTGGACGTCTTTACTTCAGCTTTGCCTGTGATGAATGTGTTCCC  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTGTTGGACGTCTTTACTTCAGCTTTGCCTGTGATGAATGTGTTCCC  840

seq1  AGAGCCAGAATAAGAAAGTTAGAATTATGATTTATTCTTGTTTGTCTGTG  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCCAGAATAAGAAAGTTAGAATTATGATTTATTCTTGTTTGTCTGTG  890

seq1  AAGATTGTGAGAATAGAACAGCTCCCTACTCTGTTAATAATGGTGATGTG  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATTGTGAGAATAGAACAGCTCCCTACTCTGTTAATAATGGTGATGTG  940

seq1  ATTGAGTTAACACAAGGCCCTGATCTGTGCACATCAGTTAATGTCCAAAT  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAGTTAACACAAGGCCCTGATCTGTGCACATCAGTTAATGTCCAAAT  990

seq1  GTTCTTTTCTAATGTAGTCTTAGTTCTGGCAACAATTTATCCACCAACCT  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTTTTCTAATGTAGTCTTAGTTCTGGCAACAATTTATCCACCAACCT  1040

seq1  GTTCCAAACAACTGTTAGTTGATTATCAAAAAGTTATAAAGGTCTTTCTG  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCAAACAACTGTTAGTTGATTATCAAAAAGTTATAAAGGTCTTTCTG  1090

seq1  GATCATTTTAGGTGCTTCTTGCAATTCAGAATTCCTCAGTTAAGAATTC  1146
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCATTTTAGGTGCTTCTTGCAATTCAGAATTCCTCAGTTAAGAATTC  1139