BAC Information

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BAC

Clone NameB6Ng01-123L13
Chromosome10 (Build37)
Map Location 110,607,533 - 110,752,345
singlet/doubletdoublet
Overlap geneOsbpl8, Bbs10
Upstream geneLOC100042506, LOC100042510, LOC667855, 9230102K24Rik, LOC100042518, E2f7, Csrp2, Zdhhc17, EG432502, LOC667904
Downstream geneNap1l1, EG382421, Phlda1, Krr1, Glipr1, EG639527, Glipr1l1, Glipr1l2, LOC627895, Glipr1l3, Caps2, Kcnc2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-123L13.bB6Ng01-123L13.g
ACCDH926813DH926814
length1,1181,098
definitionDH926813|Mus musculus domesticus DNA, BAC clone: B6Ng01-123L13, 5' end.DH926814|Mus musculus domesticus DNA, BAC clone: B6Ng01-123L13, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(110,607,533 - 110,608,661)(110,751,232 - 110,752,345)
sequence
gaattcagaagttttggagttgactgataggcctctccaacatttctctc
cacatgtgcttgtgtgtacaggcgtatttgtatgtacttgtgtgtacatg
ccagtgttgtgcttgctgagtaggctaaactggctagctggccagtgagc
tttaggtatgaccgtaattctcctttcccagccctgggactgtacatgta
ggcctctgtctggtttttacacatggccaggagagtaaactcatgtacca
aatgcatgcacatgagcactagttatgagatgtcacagtttcttgcaaag
aatccaaagcctttataaattactgaatgtctagtgggaatgctacccct
ctggaagagaggagctgatgtaagcggtattttgaatgaggttggaagct
ggtgccaagagggcatggatacattgttcaagtgagaaggtgggaactgg
aagaaaccaggtgtgctaagtgtatacttttgtgtcttgtctattattga
agatgagcagttcagaagctaagaaaaacagcactgtgcattgtagtgtg
gcttttgtaataatactgtgtggatacaaatattggcagcaatggattct
cttatcaccatcattttagacatgtaaagaaacagaataacattgacttg
gtgccagactgtaagttcagaactactttattgtctctggctgaccaggg
gtggccacagggaagaaaatgcagctgtaggctgaattgacaggctgaaa
gggaaagtgtgtagaggccaggcacagaacctgtaggcttctcagttctt
acttagtagagaagagactttactagaaactgaaataaacagaaattagc
agtagaagctagctagttggtgccgaggctgctgttaggagggtgagacc
atactgaagagggataggaaggcaggtgcagttcattgcttgccacagtc
ttccttcctccctgtcatcaggggggtgtggtgatgtgctgtgctgtcac
gctggattgaaatgacggaggatgggtggtctttctttacctttctccat
ttggggagtcaagtctgaaggttgaggtctttgggaagtaacctaggttc
aaggatctattccctgat
gaattccagccacaggagagaattcagatgggtttcataaccaactctgg
caagcacatggcaaattccggtgagaaaggaagatgatgtcacagcagga
gagaagagaaactcacccatattcccggggctggaaagtagaagcagatt
gctaatgagtccgccagccaagcacataagagagctctctctctacacag
tggccatctagcatcgcacagtagcatggaaaacagtgtccatgatagca
gctgttagagatctaagccgaaggccactcctctaccagcgtgtgcgaga
tgggtgttcagagatggcatggagtagctttaggagtatgggcttcccct
ggagaaatggtgactttattccccacacatgctttcttcccctctgatgt
ccagcagtgtggtccgttctacagctcacaggttttcagaagttctgaga
aaggagatcaagtcacttgcagccatggtccagggattgaaggctgggag
tccatgaaagcaatgcccaggaacaagagccacatctcagtgtctctcct
ctcagattccatcctccaggggtcccccagagtcttgctctgcagttgct
cctgcggggctcagcatccctgctttggctcttctgggagtcactttgtt
aagtgatccaggcatgccaggctcaaggccatctctgaattctccactcg
gacccctccaccaatgtttcttttctgcctgcatccacagctcccaatag
catggtgcagtagcgtggcattagcggagaatgcccacatccacatttaa
tccatctattctctaactcactcattttacaaacactgctacatttgggg
ggttagagattaatgtgacatcacttctgtcactatggagctcactagga
cggaatgccccagcagcagggcaatgaccttggcagtgggaatgaaggca
agcatgaaaagagcaaaggtttcttttttccaccttcttccgtggctgct
acaggaaggtgaggctggcccaaaattaggttggtctccacctcccaggc
ttaatcagagattccttttcaggcttgcccagtgctgggttttagaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_110607533_110608661
seq2: B6Ng01-123L13.b_49_1166

seq1  GAATTCAGAAGTTTTGGAGTTGACTGATAGGCCTCTCCAACATTTCTCTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGAAGTTTTGGAGTTGACTGATAGGCCTCTCCAACATTTCTCTC  50

seq1  CACATGTGCTTGTGTGTACAGGCGTATTTGTATGTACTTGTGTGTACATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATGTGCTTGTGTGTACAGGCGTATTTGTATGTACTTGTGTGTACATG  100

seq1  CCAGTGTTGTGCTTGCTGAGTAGGCTAAACTGGCTAGCTGGCCAGTGAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTGTTGTGCTTGCTGAGTAGGCTAAACTGGCTAGCTGGCCAGTGAGC  150

seq1  TTTAGGTATGACCGTAATTCTCCTTTCCCAGCCCTGGGACTGTACATGTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGGTATGACCGTAATTCTCCTTTCCCAGCCCTGGGACTGTACATGTA  200

seq1  GGCCTCTGTCTGGTTTTTACACATGGCCAGGAGAGTAAACTCATGTACCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTCTGTCTGGTTTTTACACATGGCCAGGAGAGTAAACTCATGTACCA  250

seq1  AATGCATGCACATGAGCACTAGTTATGAGATGTCACAGTTTCTTGCAAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCATGCACATGAGCACTAGTTATGAGATGTCACAGTTTCTTGCAAAG  300

seq1  AATCCAAAGCCTTTATAAATTACTGAATGTCTAGTGGGAATGCTACCCCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCAAAGCCTTTATAAATTACTGAATGTCTAGTGGGAATGCTACCCCT  350

seq1  CTGGAAGAGAGGAGCTGATGTAAGCGGTATTTTGAATGAGGTTGGAAGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAAGAGAGGAGCTGATGTAAGCGGTATTTTGAATGAGGTTGGAAGCT  400

seq1  GGTGCCAAGAGGGCATGGATACATTGTTCAAGTGAGAAGGTGGGAACTGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGCCAAGAGGGCATGGATACATTGTTCAAGTGAGAAGGTGGGAACTGG  450

seq1  AAGAAACCAGGTGTGCTAAGTGTATACTTTTGTGTCTTGTCTATTATTGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAACCAGGTGTGCTAAGTGTATACTTTTGTGTCTTGTCTATTATTGA  500

seq1  AGATGAGCAGTTCAGAAGCTAAGAAAAACAGCACTGTGCATTGTAGTGTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGAGCAGTTCAGAAGCTAAGAAAAACAGCACTGTGCATTGTAGTGTG  550

seq1  GCTTTTGTAATAATACTGTGTGGATACAAATATTGGCAGCAATGGATTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTTGTAATAATACTGTGTGGATACAAATATTGGCAGCAATGGATTCT  600

seq1  CTTATCACCATCATTTTAGACATGTAAAGAAACAGAATAACATTGACTTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATCACCATCATTTTAGACATGTAAAGAAACAGAATAACATTGACTTG  650

seq1  GTGCCAGACTGTAAGTTCAGAACTACTTTATTGTCTCTGGCTGACCAGGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCCAGACTGTAAGTTCAGAACTACTTTATTGTCTCTGGCTGACCAGGG  700

seq1  GTGGCCACAGGGAAGAAAATGCAGCTGTAGGCTGAATTGACAGGCTGAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCCACAGGGAAGAAAATGCAGCTGTAGGCTGAATTGACAGGCTGAAA  750

seq1  GGGAAAGTGTGTAGAGGCCAGGCACAGAACCTGTAGGCTTCTCAGTTCTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAAGTGTGTAGAGGCCAGGCACAGAACCTGTAGGCTTCTCAGTTCTT  800

seq1  ACTTAGTAGAGAAGAGACTTTACTAGAAACTGAAATAAACAGAAATTAGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTAGTAGAGAAGAGACTTTACTAGAAACTGAAATAAACAGAAATTAGC  850

seq1  AGTAGAAGCTAGCTAGTTGGTGCCGAGGCTGCTGTTAGGAGGGGTGAGAC  900
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  AGTAGAAGCTAGCTAGTTGGTGCCGAGGCTGCTGTTAGGA-GGGTGAGAC  899

seq1  CATACTGAAGAGGGATAGGAAGGGCAGGTGCAGTTCATTGCTTGCCACAG  950
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  CATACTGAAGAGGGATAGGAA-GGCAGGTGCAGTTCATTGCTTGCCACAG  948

seq1  TCTTCCTTCCTCCCTGTCATCAGGTGGGTGTGGTGGATGTGCTGTGCTGT  1000
      |||||||||||||||||||||||| ||||||||| |||||||||||||||
seq2  TCTTCCTTCCTCCCTGTCATCAGGGGGGTGTGGT-GATGTGCTGTGCTGT  997

seq1  CACGCTGGATTGAAATGACGGAGGAGTGGGTGTCCTTTCTTTACCTTTTC  1050
      ||||||||||||||||||||||||| ||||||  ||||||||||||||  
seq2  CACGCTGGATTGAAATGACGGAGGA-TGGGTGGTCTTTCTTTACCTTT--  1044

seq1  TTCCATTTGTGGAGTCAAGTCTGAAGGTTGGAGGTCTTTTGGGGAAGTAG  1100
       |||||||| ||||||||||||||||||| |||||||||  |||||||| 
seq2  CTCCATTTGGGGAGTCAAGTCTGAAGGTT-GAGGTCTTT--GGGAAGTA-  1090

seq1  ACATAGGTTCAAAGGATCTAGTCCCTGAT  1129
      || ||||||| ||||||||| ||||||||
seq2  ACCTAGGTTC-AAGGATCTATTCCCTGAT  1118

seq1: chr10_110751232_110752345
seq2: B6Ng01-123L13.g_68_1165 (reverse)

seq1  TCTCTTAAAACCCAAGCAACTGGGCAAAAGCCTGAAAAGGGATACTCTTG  50
      |||| |||||||| ||| |||||||  ||||||||||||| || ||| ||
seq2  TCTC-TAAAACCC-AGC-ACTGGGC--AAGCCTGAAAAGGAAT-CTC-TG  43

seq1  ATTAAAGCCTTGGAGGTGGGAAGACCAACCCTAAATCTGGGCCACGCCTC  100
      ||| |||||| ||||||||  ||||||| ||||| | ||||||| |||||
seq2  ATT-AAGCCTGGGAGGTGG--AGACCAA-CCTAATTTTGGGCCA-GCCTC  88

seq1  ACCTCCTGGTAGCAGCCCACGTGAAAGAAGGTGGAAAAAGGAAGCCTTTG  150
      |||| |  ||||||| ||||  | ||||||||||||||| ||| ||||||
seq2  ACCTTCCTGTAGCAG-CCAC--GGAAGAAGGTGGAAAAAAGAAACCTTTG  135

seq1  CTCTTTTCCTGCTTGCCTTCATTCCCACTGGCAAGGTCATCTGCCCTGCT  200
      |||||||| ||||||||||||||||||||| ||||||||| |||||||||
seq2  CTCTTTTCATGCTTGCCTTCATTCCCACTGCCAAGGTCAT-TGCCCTGCT  184

seq1  GCTGTGGCATTCCGTCCTAGTGAGCTCCATAGTGACAGAAGTGATGTCAC  250
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGGGCATTCCGTCCTAGTGAGCTCCATAGTGACAGAAGTGATGTCAC  234

seq1  ATTTATCTCTAACCCCCACAATGTAGCAGTGTTTGTTAAATGAGTGAGTT  300
      ||| |||||||||||||  ||||||||||||||||| |||||||||||||
seq2  ATTAATCTCTAACCCCCCAAATGTAGCAGTGTTTGTAAAATGAGTGAGTT  284

seq1  AGAGAATAGATGGATTAAAATGTGGATGTGGGCATTCTCCGCT-ATGCCA  349
      |||||||||||||||| |||||||||||||||||||||||||| ||||||
seq2  AGAGAATAGATGGATT-AAATGTGGATGTGGGCATTCTCCGCTAATGCCA  333

seq1  CGCTACTGCACCATGCTATTGGGAGCTGTGGATGCAGGGCAGAAAAG-AA  398
      |||||||||||||||||||||||||||||||||||| |||||||||| ||
seq2  CGCTACTGCACCATGCTATTGGGAGCTGTGGATGCA-GGCAGAAAAGAAA  382

seq1  CATTGGTGGAGGGGTCCGAGTGGAGAATTCAGAGATGGCCTTGAGCCTGG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGGTGGAGGGGTCCGAGTGGAGAATTCAGAGATGGCCTTGAGCCTGG  432

seq1  CATGCCTGGATCACTTAACAAAGTGACTCCCAGAAGAGCCAAAGCAGGGA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCCTGGATCACTTAACAAAGTGACTCCCAGAAGAGCCAAAGCAGGGA  482

seq1  TGCTGAGCCCCGCAGGAGCAACTGCAGAGCAAGACTCTGGGGGACCCCTG  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGAGCCCCGCAGGAGCAACTGCAGAGCAAGACTCTGGGGGACCCCTG  532

seq1  GAGGATGGAATCTGAGAGGAGAGACACTGAGATGTGGCTCTTGTTCCTGG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGATGGAATCTGAGAGGAGAGACACTGAGATGTGGCTCTTGTTCCTGG  582

seq1  GCATTGCTTTCATGGACTCCCAGCCTTCAATCCCTGGACCATGGCTGCAA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTGCTTTCATGGACTCCCAGCCTTCAATCCCTGGACCATGGCTGCAA  632

seq1  GTGACTTGATCTCCTTTCTCAGAACTTCTGAAAACCTGTGAGCTGTAGAA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACTTGATCTCCTTTCTCAGAACTTCTGAAAACCTGTGAGCTGTAGAA  682

seq1  CGGACCACACTGCTGGACATCAGAGGGGAAGAAAGCATGTGTGGGGAATA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGACCACACTGCTGGACATCAGAGGGGAAGAAAGCATGTGTGGGGAATA  732

seq1  AAGTCACCATTTCTCCAGGGGAAGCCCATACTCCTAAAGCTACTCCATGC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCACCATTTCTCCAGGGGAAGCCCATACTCCTAAAGCTACTCCATGC  782

seq1  CATCTCTGAACACCCATCTCGCACACGCTGGTAGAGGAGTGGCCTTCGGC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTCTGAACACCCATCTCGCACACGCTGGTAGAGGAGTGGCCTTCGGC  832

seq1  TTAGATCTCTAACAGCTGCTATCATGGACACTGTTTTCCATGCTACTGTG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGATCTCTAACAGCTGCTATCATGGACACTGTTTTCCATGCTACTGTG  882

seq1  CGATGCTAGATGGCCACTGTGTAGAGAGAGAGCTCTCTTATGTGCTTGGC  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGATGCTAGATGGCCACTGTGTAGAGAGAGAGCTCTCTTATGTGCTTGGC  932

seq1  TGGCGGACTCATTAGCAATCTGCTTCTACTTTCCAGCCCCGGGAATATGG  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCGGACTCATTAGCAATCTGCTTCTACTTTCCAGCCCCGGGAATATGG  982

seq1  GTGAGTTTCTCTTCTCTCCTGCTGTGACATCATCTTCCTTTCTCACCGGA  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGTTTCTCTTCTCTCCTGCTGTGACATCATCTTCCTTTCTCACCGGA  1032

seq1  ATTTGCCATGTGCTTGCCAGAGTTGGTTATGAAACCCATCTGAATTCTCT  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGCCATGTGCTTGCCAGAGTTGGTTATGAAACCCATCTGAATTCTCT  1082

seq1  CCTGTGGCTGGAATTC  1114
      ||||||||||||||||
seq2  CCTGTGGCTGGAATTC  1098