BAC Information

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BAC

Clone NameB6Ng01-123P21
Chromosome10 (Build37)
Map Location 14,178,144 - 14,349,541
singlet/doubletdoublet
Overlap geneGpr126, LOC100039571, LOC100039409
Upstream geneFuca2, Pex3, Deadc1, Aig1, EG666859, Hivep2
Downstream geneVta1, D230044M03Rik, EG666904, Nmbr, LOC666917, LOC637043
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-123P21.bB6Ng01-123P21.g
ACCDH927013DH927014
length982769
definitionDH927013|Mus musculus domesticus DNA, BAC clone: B6Ng01-123P21, 5' end.DH927014|Mus musculus domesticus DNA, BAC clone: B6Ng01-123P21, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(14,348,881 - 14,349,541)(14,178,144 - 14,178,915)
sequence
gaattctcaactgaggaatactgaatggctgagaagcacctgtgctcatg
cactatggcacattatgttggcagagcacgtggctgccaacacctcctga
caaccagaaagagcaaacagcaagaatgtgagtgggttgtgggccaaggt
atatcgttcaaggttaacctcctttctccacggaggccctataccatatt
ttatcctttccaagtgattctacccaattttgaattcatctatggaatac
tttgttattaggtcaaacccttggattccagcattcctccacagatccat
gtctgaatattgcattggggatcaaaacttgaacacaggtttatgggctc
aagttatactcaaaccatcacagaatttgttgtgagttgttgttttaggt
ttaaaaattttttaaagtaaaataaataaaagaatttgtacatttgtgtt
tttaagtatatcttgtacttatttcccagaaatgttaaaagtcacagtct
tatattagctgttggtttattgtatatggctttatgtgttttcatatatt
agttctattcataatttgttcacttttatcatgaagagatgttgtatttt
attaaatgtctattctgcatctattgagctccccatatattttttgttct
tcattgtattgttgtgacaaggcactaacattggcttgtgtgtactatat
gtattatatattgggggtgtgtatacttctactcctaagtaacttctact
tggtcatggtgaacaatcttcttaatttattagaattgacttacttgtgt
tttcttgaggaagttttgcatcttggttcaaggtattagtgtatagtttt
ccatattaaagttgttttgatatcagataatcctgagtttgttaattgag
taagaaataactcttttctttaagatgataggatcaggttttttaaaatt
agttttgttagaggtcacctgatgaactggtt
gaattcaaattgccctcaaactcttgggcttcagccatatgtacctgaaa
taaaaaagcatgattatcccttaaagtttatgtaaaacatttggggattt
ttttgaataatgaactatgaaactcaagtagcaattcatgtaaataaaat
aatatgaacattcagggttcacttcaaaacagaacttggatattttgaat
tactcatgaaatgctgatttttgcatataaacacaattatacaaactcta
attccacaagtgtctttccaggatttccagtcagtcttgttttgtgtgat
ttcaagctttctctgatgcctcctcaacaggaaataggcactaaactgat
attctaatagaaatattagatgctctttgtggcattaaatcttgctgtca
tggttatgggctaaacttagtgcaaataatatgtcagttgaataaagact
caaatatttacattatgcatacatacatatataatacaccaatatatata
tatatatatatatatatatatatatatatatatatatatacatatacata
tagtggtgtagagtactagtgtagtggtgaattcattctaatgttgaaaa
catgttcccaactatctcatgggaatactatttgaagacaaagcgggcgc
gtgagctcacgaaagaatgtagaataggtaatggcatatcacgagcagag
actgtctacagtttaatggcaccaaagaaggagtggtttccctctttcac
aaatgtctaggctcatgga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_14348881_14349541
seq2: B6Ng01-123P21.b_48_708 (reverse)

seq1  CAATACAATGAAGAACAAAAAATATATGGGGAGCTCAATAGATGCAGAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATACAATGAAGAACAAAAAATATATGGGGAGCTCAATAGATGCAGAAT  50

seq1  AGACATTTAATAAAATACAACATCTCTTCATGATAAAAGTGAACAAATTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACATTTAATAAAATACAACATCTCTTCATGATAAAAGTGAACAAATTA  100

seq1  TGAATAGAACTAATATATGAAAACACATAAAGCCATATACAATAAACCAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATAGAACTAATATATGAAAACACATAAAGCCATATACAATAAACCAA  150

seq1  CAGCTAATATAAGACTGTGACTTTTAACATTTCTGGGAAATAAGTACAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTAATATAAGACTGTGACTTTTAACATTTCTGGGAAATAAGTACAAG  200

seq1  ATATACTTAAAAACACAAATGTACAAATTCTTTTATTTATTTTACTTTAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATACTTAAAAACACAAATGTACAAATTCTTTTATTTATTTTACTTTAA  250

seq1  AAAATTTTTAAACCTAAAACAACAACTCACAACAAATTCTGTGATGGTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTTTTAAACCTAAAACAACAACTCACAACAAATTCTGTGATGGTTT  300

seq1  GAGTATAACTTGAGCCCATAAACCTGTGTTCAAGTTTTGATCCCCAATGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTATAACTTGAGCCCATAAACCTGTGTTCAAGTTTTGATCCCCAATGC  350

seq1  AATATTCAGACATGGATCTGTGGAGGAATGCTGGAATCCAAGGGTTTGAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTCAGACATGGATCTGTGGAGGAATGCTGGAATCCAAGGGTTTGAC  400

seq1  CTAATAACAAAGTATTCCATAGATGAATTCAAAATTGGGTAGAATCACTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATAACAAAGTATTCCATAGATGAATTCAAAATTGGGTAGAATCACTT  450

seq1  GGAAAGGATAAAATATGGTATAGGGCCTCCGTGGAGAAAGGAGGTTAACC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAGGATAAAATATGGTATAGGGCCTCCGTGGAGAAAGGAGGTTAACC  500

seq1  TTGAACGATATACCTTGGCCCACAACCCACTCACATTCTTGCTGTTTGCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAACGATATACCTTGGCCCACAACCCACTCACATTCTTGCTGTTTGCT  550

seq1  CTTTCTGGTTGTCAGGAGGTGTTGGCAGCCACGTGCTCTGCCAACATAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTGGTTGTCAGGAGGTGTTGGCAGCCACGTGCTCTGCCAACATAAT  600

seq1  GTGCCATAGTGCATGAGCACAGGTGCTTCTCAGCCATTCAGTATTCCTCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCCATAGTGCATGAGCACAGGTGCTTCTCAGCCATTCAGTATTCCTCA  650

seq1  GTTGAGAATTC  661
      |||||||||||
seq2  GTTGAGAATTC  661

seq1: chr10_14178144_14178915
seq2: B6Ng01-123P21.g_68_836

seq1  GAATTCAAATTGCCCTCAAACTCTTGGGCTTCAGCCATATGTACCTGAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAATTGCCCTCAAACTCTTGGGCTTCAGCCATATGTACCTGAAA  50

seq1  TAAAAAAGCATGATTATCCCTTAAAGTTTATGTAAAACATTTGGGGATTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAAAGCATGATTATCCCTTAAAGTTTATGTAAAACATTTGGGGATTT  100

seq1  TTTTGAATAATGAACTATGAAACTCAAGTAGCAATTCATGTAAATAAAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGAATAATGAACTATGAAACTCAAGTAGCAATTCATGTAAATAAAAT  150

seq1  AATATGAACATTCAGGGTTCACTTCAAAACAGAACTTGGATATTTTGAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATGAACATTCAGGGTTCACTTCAAAACAGAACTTGGATATTTTGAAT  200

seq1  TACTCATGAAATGCTGATTTTTGCATATAAACACAATTATACAAACTCTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCATGAAATGCTGATTTTTGCATATAAACACAATTATACAAACTCTA  250

seq1  ATTCCACAAGTGTCTTTCCAGGATTTCCAGTCAGTCTTGTTTTGTGTGAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCACAAGTGTCTTTCCAGGATTTCCAGTCAGTCTTGTTTTGTGTGAT  300

seq1  TTCAAGCTTTCTCTGATGCCTCCTCAACAGGAAATAGGCACTAAACTGAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAGCTTTCTCTGATGCCTCCTCAACAGGAAATAGGCACTAAACTGAT  350

seq1  ATTCTAATAGAAATATTAGATGCTCTTTGTGGCATTAAATCTTGCTGTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTAATAGAAATATTAGATGCTCTTTGTGGCATTAAATCTTGCTGTCA  400

seq1  TGGTTATGGGCTAAACTTAGTGCAAATAATATGTCAGTTGAATAAAGACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTATGGGCTAAACTTAGTGCAAATAATATGTCAGTTGAATAAAGACT  450

seq1  CAAATATTTACATTATGCATACATACATATATAATACACCAATATATATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATATTTACATTATGCATACATACATATATAATACACCAATATATATA  500

seq1  TATATATATATATATATATATATATATATATATATATATACATATACATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATATATATATATATATATATATATATATATATATATACATATACATA  550

seq1  TAGTGGTGTAGAGTACTAGTGTAGTGGTGAATTCATTCTAATGTT-TAAA  599
      |||||||||||||||||||||||||||||||||||||||||||||  |||
seq2  TAGTGGTGTAGAGTACTAGTGTAGTGGTGAATTCATTCTAATGTTGAAAA  600

seq1  CATGTTCCCAACTTTCTCATGGGAATACTATTTGAAGACAAAGCGGGCGC  649
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  CATGTTCCCAACTATCTCATGGGAATACTATTTGAAGACAAAGCGGGCGC  650

seq1  GTGAGCTCAC-AGAGAATGTCTAATTAGGTAAGTGGCAGATACACAAGCA  698
      |||||||||| | |||||||  || ||||||| ||||| || ||| ||||
seq2  GTGAGCTCACGAAAGAATGTAGAA-TAGGTAA-TGGCATAT-CACGAGCA  697

seq1  GAAAACATGTCAACAGTTTAATGGCATCTAGGAAGGTATGGTTT-CCTCT  747
      || |   |||| |||||||||||||| | | |||||  |||||| |||||
seq2  GAGA--CTGTCTACAGTTTAATGGCACCAAAGAAGGAGTGGTTTCCCTCT  745

seq1  TTCTCAGATGTCTCAGGCTCATGGA  772
      ||| || |||||| |||||||||||
seq2  TTCACAAATGTCT-AGGCTCATGGA  769