BAC Information

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BAC

Clone NameB6Ng01-124L24
Chromosome10 (Build37)
Map Location 67,681,847 - 67,804,814
singlet/doubletdoublet
Overlap geneArid5b, LOC100040136
Upstream geneJmjd1c, Nrbf2, Egr2, Gm237, LOC100040081, LOC100039618, Zfp365, Plekhk1
Downstream gene1700040L02Rik, EG665342, Tmem26, A930033H14Rik, Rhobtb1, LOC100040182, Cdc2a
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-124L24.bB6Ng01-124L24.g
ACCDH927578DH927579
length9821,049
definitionDH927578|Mus musculus domesticus DNA, BAC clone: B6Ng01-124L24, 5' end.DH927579|Mus musculus domesticus DNA, BAC clone: B6Ng01-124L24, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(67,681,847 - 67,682,828)(67,803,773 - 67,804,814)
sequence
gaattcttcatctcccaaaactttcaattttaactggatttacatatgat
ggtctagaagagactccaaactcacacatgatttacatgtgtaggaatca
aactcaggaaaatcctaaattctaaatacagtagataattcagaaatgcc
ttgctgaatggatgcagtttaaatattctcagcagccacccgtactacag
caccctccccccacacacacatctcacacacaccaaagataaccctaaag
cataattgattcccaaattactgttcttctgcattttcaaagggggagct
tgtttatatttaaacggggttgtgtaaacaaggtgtttagctgggagaca
ttttcaaggccgagtactccagagccaggcgaagctatttaaagaatgga
gtactggattccgtaggccagatgctcgtataaacgtgaaactctgctcc
caccacagaggaaactatttttaggcagcacacatgaagagcactattca
cttaagcattatggggtgggattccagttaaactacatacagattctcga
cagccgtggcctcctgcattcattcaaggatgccaggcttgcagcgagga
ctgcccttcctttggtccacactggtgggacctcatggtacaaaggcttc
agggcaggtcattaaacagcctctgccctgatctcctccaggcagtgctc
cctgagtgctctcttgagggatggggtccagacactgaaagggttagttc
ctggcacactccagcgctccccaggtgggtttctgttgctccacaggtgt
actgattctacagccttattgggcctcctaccttacctccaccatgttgg
ttattctgcaaactggaatctactttgaaccccagattgcaaaccagaaa
ggatgcaatctggaaagtgatgggggggaggtacacaaaccggcaaagtc
aacgaccctggagtaatcctccaagtgttttt
gaattctctgtgtagcactggctgtcctggaactcacgctgtagaccagg
ctagcctcgaactcaaaaattcacctgcctctgctatagtcatcttctta
tgtatctgtattcaccctccccatctagattatttatagcaaatcccaga
catcatggtatcttatctgtgaatactgtctgcagggatctctaaacagc
agttttttacctgtgggttgtgactcctaatatgcaaatatcctgcatat
tagatatttgcattgcaattcataacagtagcaaataacacttagactgt
agcagtgaaaataattttattgggggtcagcacaacatgaggaacggcat
taaagggtcacagcataagaaggttgagtcataagaaggtacatctctat
taacttagttaaaatgttaacattaactgtgtaatagcattaattacagc
aataacattttcctaggcatcttgtggtttttaactgcacaggttcaaat
caggaccagaataagatccatacgtggatttcatgtctgttaaatctcct
taaatctaaatgttccctttctctacttctccctggacactctatcctcc
atcccctttaaatctgcctgctatcgtatagattctgcattttgctcata
ctcctgtgattcgctgattatgcctctctttgacccatatgtttcctata
tacaaaggtctgtagagccagagtcttgctcaatgatggctttattattt
attttgatcacttggcaacagcattttaaaggctgataaaaaaaatttct
aaggttattggatgctgatctttttggtgatctctactctgtgtggtctt
ttatctgaatcatgcatgggttttttttgctttgttttgttttggtcttt
ggtttgtttgttttgttcctaaatggtttgtaagccattaggaggaccct
ggctgggactgttgcatgaaatttcaatttcagtgggcgatattctaatt
tctaataaccttgcatcggaaaacatattatggatggaaaattcatcat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_67681847_67682828
seq2: B6Ng01-124L24.b_45_1026

seq1  GAATTCTTCATCTCCCAAAACTTTCAATTTTAACTGGATTTACATATGAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCATCTCCCAAAACTTTCAATTTTAACTGGATTTACATATGAT  50

seq1  GGTCTAGAAGAGACTCCAAACTCACACATGATTTACATGTGTAGGAATCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTAGAAGAGACTCCAAACTCACACATGATTTACATGTGTAGGAATCA  100

seq1  AACTCAGGAAAATCCTAAATTCTAAATACAGTAGATAATTCAGAAATGCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCAGGAAAATCCTAAATTCTAAATACAGTAGATAATTCAGAAATGCC  150

seq1  TTGCTGAATGGATGCAGTTTAAATATTCTCAGCAGCCACCCGTACTACAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTGAATGGATGCAGTTTAAATATTCTCAGCAGCCACCCGTACTACAG  200

seq1  CACCCTCCCCCCACACACACATCTCACACACACCAAAGATAACCCTAAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCTCCCCCCACACACACATCTCACACACACCAAAGATAACCCTAAAG  250

seq1  CATAATTGATTCCCAAATTACTGTTCTTCTGCATTTTCAAAGGGGGAGCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAATTGATTCCCAAATTACTGTTCTTCTGCATTTTCAAAGGGGGAGCT  300

seq1  TGTTTATATTTAAACGGGGTTGTGTAAACAAGGTGTTTAGCTGGGAGACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTATATTTAAACGGGGTTGTGTAAACAAGGTGTTTAGCTGGGAGACA  350

seq1  TTTTCAAGGCCGAGTACTCCAGAGCCAGGCGAAGCTATTTAAAGAATGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCAAGGCCGAGTACTCCAGAGCCAGGCGAAGCTATTTAAAGAATGGA  400

seq1  GTACTGGATTCCGTAGGCCAGATGCTCGTATAAACGTGAAACTCTGCTCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTGGATTCCGTAGGCCAGATGCTCGTATAAACGTGAAACTCTGCTCC  450

seq1  CACCACAGAGGAAACTATTTTTAGGCAGCACACATGAAGAGCACTATTCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCACAGAGGAAACTATTTTTAGGCAGCACACATGAAGAGCACTATTCA  500

seq1  CTTAAGCATTATGGGGTGGGATTCCAGTTAAACTACATACAGATTCTCGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAGCATTATGGGGTGGGATTCCAGTTAAACTACATACAGATTCTCGA  550

seq1  CAGCCGTGGCCTCCTGCATTCATTCAAGGATGCCAGGCTTGCAGCGAGGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCGTGGCCTCCTGCATTCATTCAAGGATGCCAGGCTTGCAGCGAGGA  600

seq1  CTGCCCTTCCTTTGGTCCACACTGGTGGGACCTCATGGTACAAAGGCTTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCCTTCCTTTGGTCCACACTGGTGGGACCTCATGGTACAAAGGCTTC  650

seq1  AGGGCAGGTCATTAAACAGCCTCTGCCCTGATCTCCTCCAGGCAGTGCTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCAGGTCATTAAACAGCCTCTGCCCTGATCTCCTCCAGGCAGTGCTC  700

seq1  CCTGAGTGCTCTCTTGAGGGATGGGGTCCAGACACTG-AAGGGTTAGTTC  749
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  CCTGAGTGCTCTCTTGAGGGATGGGGTCCAGACACTGAAAGGGTTAGTTC  750

seq1  CTGGCACACTCCAGCGCTCCCCAGGTGGGTTTCTGTCCCTCCACAGGTGT  799
      ||||||||||||||||||||||||||||||||||||  ||||||||||||
seq2  CTGGCACACTCCAGCGCTCCCCAGGTGGGTTTCTGTTGCTCCACAGGTGT  800

seq1  ACTGATTCTACAGCCTTATT-GGCCTCCTACCTTACCTCCACCATGTTGG  848
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  ACTGATTCTACAGCCTTATTGGGCCTCCTACCTTACCTCCACCATGTTGG  850

seq1  TTATTCTGCAAACTGGAATCTACTTTGAA-CCCAGATTGCAAAACCAGAA  897
      ||||||||||||||||||||||||||||| |||||||||| |||||||||
seq2  TTATTCTGCAAACTGGAATCTACTTTGAACCCCAGATTGC-AAACCAGAA  899

seq1  AGGATGCAAATCT-GAAAGTGAT-GGGGGGAGGTACACAAACCGGCAAAA  945
      ||||||| ||||| ||||||||| |||||||||||||||||||||| |||
seq2  AGGATGC-AATCTGGAAAGTGATGGGGGGGAGGTACACAAACCGGC-AAA  947

seq1  GTCAAACGACCCTGGAGTAGATCCTCAAAGTGTTTTT  982
      ||| ||||||||||||||| |||||| ||||||||||
seq2  GTC-AACGACCCTGGAGTA-ATCCTCCAAGTGTTTTT  982

seq1: chr10_67803773_67804814
seq2: B6Ng01-124L24.g_68_1116 (reverse)

seq1  ATGATGAATTTT-CAT-CAT-ATATGTTTTCCAGATGACAAAGTTATTAG  47
      |||||||||||| ||| ||| ||||||||||| |||| ||| ||||||||
seq2  ATGATGAATTTTCCATCCATAATATGTTTTCC-GATG-CAAGGTTATTAG  48

seq1  -AATTAGAATATCGCCAACTGAAA-TGAGATTTCATGCAACAGTCCCAGC  95
       ||||||||||||||| ||||||| ||| |||||||||||||||||||||
seq2  AAATTAGAATATCGCCCACTGAAATTGAAATTTCATGCAACAGTCCCAGC  98

seq1  CAGGGTCCTCCTAATGGCTTACAAACCATTTAGGAACAAAAACAAACAAA  145
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  CAGGGTCCTCCTAATGGCTTACAAACCATTTAGGAAC-AAAACAAACAAA  147

seq1  -CAAAGACAAAACAAAAACAAAGCAAAAAAAA-CCATGCATGATTCAGAT  193
       ||||||| |||  |||||||||||||||||| |||||||||||||||||
seq2  CCAAAGACCAAAACAAAACAAAGCAAAAAAAACCCATGCATGATTCAGAT  197

seq1  -AAAGACCACACAGAGTAGAGATCA-CAAAAAGATCAGCATCCAATAACC  241
       |||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  AAAAGACCACACAGAGTAGAGATCACCAAAAAGATCAGCATCCAATAACC  247

seq1  TTAGAAATTTTTTTTATCAGCCTTTAAAATGCTGTTGCCAAGTGATCAAA  291
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAAATTTTTTTTATCAGCCTTTAAAATGCTGTTGCCAAGTGATCAAA  297

seq1  ATAAATAATAAAGCCATCATTGAGCAAGACTCTGGCTCTACAGACC-TTG  340
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  ATAAATAATAAAGCCATCATTGAGCAAGACTCTGGCTCTACAGACCTTTG  347

seq1  TATATAGGAAACATATGGGTCAAAGAGAGGCATAATCAGCGAATCACAGG  390
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATAGGAAACATATGGGTCAAAGAGAGGCATAATCAGCGAATCACAGG  397

seq1  AGTATGAGCAAAATGCAGAATCTATACGATAGCAGGCAGATTTAAAGGGG  440
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATGAGCAAAATGCAGAATCTATACGATAGCAGGCAGATTTAAAGGGG  447

seq1  ATGGAGGATAGAGTGTCCAGGGAGAAGTAGAGAAAGGGAACATTTAGATT  490
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAGGATAGAGTGTCCAGGGAGAAGTAGAGAAAGGGAACATTTAGATT  497

seq1  TAAGGAGATTTAACAGACATGAAATCCACGTATGGATCTTATTCTGGTCC  540
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGAGATTTAACAGACATGAAATCCACGTATGGATCTTATTCTGGTCC  547

seq1  TGATTTGAACCTGTGCAGTTAAAAACCACAAGATGCCTAGGAAAATGTTA  590
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTTGAACCTGTGCAGTTAAAAACCACAAGATGCCTAGGAAAATGTTA  597

seq1  TTGCTGTAATTAATGCTATTACACAGTTAATGTTAACATTTTAACTAAGT  640
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTGTAATTAATGCTATTACACAGTTAATGTTAACATTTTAACTAAGT  647

seq1  TAATAGAGATGTACCTTCTTATGACTCAACCTTCTTATGCTGTGACCCTT  690
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAGAGATGTACCTTCTTATGACTCAACCTTCTTATGCTGTGACCCTT  697

seq1  TAATGCCGTTCCTCATGTTGTGCTGACCCCCAATAAAATTATTTTCACTG  740
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGCCGTTCCTCATGTTGTGCTGACCCCCAATAAAATTATTTTCACTG  747

seq1  CTACAGTCTAAGTGTTATTTGCTACTGTTATGAATTGCAATGCAAATATC  790
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACAGTCTAAGTGTTATTTGCTACTGTTATGAATTGCAATGCAAATATC  797

seq1  TAATATGCAGGATATTTGCATATTAGGAGTCACAACCCACAGGTAAAAAA  840
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATATGCAGGATATTTGCATATTAGGAGTCACAACCCACAGGTAAAAAA  847

seq1  CTGCTGTTTAGAGATCCCTGCAGACAGTATTCACAGATAAGATACCATGA  890
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTGTTTAGAGATCCCTGCAGACAGTATTCACAGATAAGATACCATGA  897

seq1  TGTCTGGGATTTGCTATAAATAATCTAGATGGGGAGGGTGAATACAGATA  940
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTGGGATTTGCTATAAATAATCTAGATGGGGAGGGTGAATACAGATA  947

seq1  CATAAGAAGATGACTATAGCAGAGGCAGGTGAATTTTTGAGTTCGAGGCT  990
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAGAAGATGACTATAGCAGAGGCAGGTGAATTTTTGAGTTCGAGGCT  997

seq1  AGCCTGGTCTACAGCGTGAGTTCCAGGACAGCCAGTGCTACACAGAGAAT  1040
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTGGTCTACAGCGTGAGTTCCAGGACAGCCAGTGCTACACAGAGAAT  1047

seq1  TC  1042
      ||
seq2  TC  1049