BAC Information

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BAC

Clone NameB6Ng01-125D13
Chromosome10 (Build37)
Map Location 29,432,937 - 29,434,046
singlet/doubletsinglet
Overlap genenone
Upstream geneE430004N04Rik, 4930519F09Rik, 2310057J18Rik, LOC432447, 6330407J23Rik, Echdc1, Rnf146, Rspo3, EG630389, Rpl12
Downstream geneLOC623064, LOC674389, Gm232, LOC667696, LOC100040542, 2610036L11Rik, LOC212815, Trmt11, Hint3, Ncoa7
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-125D13.bB6Ng01-125D13.g
ACCDH927917DH927918
length1,2971,093
definitionDH927917|Mus musculus domesticus DNA, BAC clone: B6Ng01-125D13, 5' end.DH927918|Mus musculus domesticus DNA, BAC clone: B6Ng01-125D13, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctatcaggctttcaaagaagatctgattctaatactcctcaaact
attcaacaaaatagaaacacaaggtattctacctaatttgttctatgaag
ccataattactctaataactaaaccacacaaagactgaacaaagaaaggg
aatttcagagcaatttccctaatgaatttcaatgcaaaaatactcaataa
aattcttacaaactgaatccaagaatatattgaatgatcatcaaccatga
tcaaataaacttcatcccattaattctgggatagttcagtataagaaaat
ccatcaacataattcaataataaacaaactccaagaaaaacaaacacatg
ctcatgtcattagatgctgagaaatcatttgacaaaatccaacacctgtt
catgataaaagacttggaaagatcatgaattcaagtcccatacctaaaca
tagtaaaagcaatatacagcaaagcagtagcaaacacaaaactaaatgga
gagaaaattgaagcaatcccactaaaatcagggacaagacaaaggtgccc
accctctccctacctgtttaatatagtcctagaagtcctagccagaacaa
ttatataacaaaaggagatcaaggtatacaaattggaaaggaagaactca
aaatatcactatttgcagatgacatgatagtatacattattgaccccccc
ccccaaattccagcagaagactcctaaacctaatacaactcctaaacaac
ttcagcaaagtagctggatataaaattaactcaaacaaatcagtggcctt
cctctacacaaaggatgaacaggctgagaaagaaattagggaaacaaaac
cctacacattagtcacaaataatataaaatactttggtgtaactctaact
aaacaaatgaaaggtttatacgataagaacttcaagtctctgaagaaaga
aatcaaagatcatctctgatctcccatgcctcatggattggcaggattat
attagtaaaaatgtccatctgctgaaagcaatctaaagattcaggtgcat
tcccattaaaatttcagctcatggagatgaaaggatggaccatgtaagga
ctgccatagccagggatccacccccattatcagcatccaacgctgtaccc
cattggctataccacttgccaagatttattggaagggaccaatgtaactg
tttcttgtgaactatggcggctcacgggcaaaccaggaagtgggagtgct
ccacggtccacgtctatagtggtagtgatacataaaggggtgttctc
gaattccatagtaagtatgaagacctgtaaaaatatctcagcaatacatt
ttattgtgattatatgttgaaatggtaataattcatgtatatcaaaaaat
aaaatgaaataaatgattaatttcacctgctttctttacttttccaatat
actaacagggaaagtttaacatcatgggcgtggctcacatctgtgcttca
ctgtatttcaatggtgaactgttctaagacatggaacttttgagcacatt
tgtccaccaactaaaggtcctttagtgataaaactctagatactttaaat
ataccaatgccagtgttggctatttatgtattttcagtttttaatatcta
cagaaacagcaataaatccccagtgaacttgcttcaatgtaactgatgaa
tcttaagcatggaacagacagaatcctgggtatgggcttgggggaatcca
ccgaagaacaattctaaccttcacttgttttttcagagaacctacactct
gtggcctcttcaggacattttctacacaggtgaacatttttaaagccaga
agtagaagtcagttccgtgactggatatgtattgttaggttgacattctt
ctaatagcaaacatgataggcatgggtgagcttagctgatgccttctttc
agattcatgccaccaacactataaattacaaaacctacgcttccttcact
ccaggactcaaattagaaatgactttcttagatatcttctcctgtctata
ttttaggaaagttagtcttgcttaacacttgaagtcttttgtgttcaatt
aagcattgccaccactggatattttccccacctatgttacttatggtgga
tacattagacttttgctaaatgttatttttatgtctaattattttagtgt
agattctatctacatgtttgtatatggacctcctcaatgtgcagttatag
tgtgtgtctctctcttcacagcctttgttagaagaggagtatatttacta
tatgataatgaagtaataaacagtaatgtaaaatgatttctgtaaatgga
acccaatataacttattatgggcctaaagttctagtgcaattt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_29432937_29434046
seq2: B6Ng01-125D13.g_67_1159 (reverse)

seq1  AAATTGCCACTAGATACTTTTTAGCCCATAATAAGTTTATAATTGTGTTC  50
      |||||| ||||||| || |||  |||||||||||| |||| |||| ||||
seq2  AAATTG-CACTAGA-AC-TTTAGGCCCATAATAAG-TTAT-ATTGGGTTC  45

seq1  CATATTTACAGAAATTCATTTTTACATTACTGTTTATTACTTTCATTATC  100
      |  ||||||||||| ||| ||||||||||||||||||||| |||||||||
seq2  C--ATTTACAGAAA-TCA-TTTTACATTACTGTTTATTAC-TTCATTATC  90

seq1  ATTATTAGTAAATATTACCTCCTCTTCTTACAAAGGCTGTGAAGGAGAGA  150
      ||   ||||||||||   |||||||||| |||||||||||||| ||||||
seq2  AT--ATAGTAAATAT--ACTCCTCTTCTAACAAAGGCTGTGAA-GAGAGA  135

seq1  GACACACAACTATAACTGCCACATTGAGGAGGTCCATATACAAACATGTA  200
      ||||||| |||||||||| |||||||||||||||||||||||||||||||
seq2  GACACAC-ACTATAACTG-CACATTGAGGAGGTCCATATACAAACATGTA  183

seq1  GATAGAATCTACACTAAAATAATTAGACATAAAAATAACATTTAGCAAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGAATCTACACTAAAATAATTAGACATAAAAATAACATTTAGCAAAA  233

seq1  GTCTAATGTATCCACCATAAGTAACATAGGTGGGGAAAATATCCAGTGGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTAATGTATCCACCATAAGTAACATAGGTGGGGAAAATATCCAGTGGT  283

seq1  GGCAATGCTTAATTGAACACAAAAGACTTCAAGTGTTAAGCAAGACTAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAATGCTTAATTGAACACAAAAGACTTCAAGTGTTAAGCAAGACTAAC  333

seq1  TTTCCTAAAATATAGACAGGAGAAGATATCTAAGAAAGTCATTTCTAATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTAAAATATAGACAGGAGAAGATATCTAAGAAAGTCATTTCTAATT  383

seq1  TGAGTCCTGGAGTGAAGGAAGCGTAGGTTTTGTAATTTATAGTGTTGGTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTCCTGGAGTGAAGGAAGCGTAGGTTTTGTAATTTATAGTGTTGGTG  433

seq1  GCATGAATCTGAAAGAAGGCATCAGCTAAGCTCACCCATGCCTATCATGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGAATCTGAAAGAAGGCATCAGCTAAGCTCACCCATGCCTATCATGT  483

seq1  TTGCTATTAGAAGAATGTCAACCTAACAATACATATCCAGTCACGGAACT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTATTAGAAGAATGTCAACCTAACAATACATATCCAGTCACGGAACT  533

seq1  GACTTCTACTTCTGGCTTTAAAAATGTTCACCTGTGTAGAAAATGTCCTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTCTACTTCTGGCTTTAAAAATGTTCACCTGTGTAGAAAATGTCCTG  583

seq1  AAGAGGCCACAGAGTGTAGGTTCTCTGAAAAAACAAGTGAAGGTTAGAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGGCCACAGAGTGTAGGTTCTCTGAAAAAACAAGTGAAGGTTAGAAT  633

seq1  TGTTCTTCGGTGGATTCCCCCAAGCCCATACCCAGGATTCTGTCTGTTCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCTTCGGTGGATTCCCCCAAGCCCATACCCAGGATTCTGTCTGTTCC  683

seq1  ATGCTTAAGATTCATCAGTTACATTGAAGCAAGTTCACTGGGGATTTATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTTAAGATTCATCAGTTACATTGAAGCAAGTTCACTGGGGATTTATT  733

seq1  GCTGTTTCTGTAGATATTAAAAACTGAAAATACATAAATAGCCAACACTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTTTCTGTAGATATTAAAAACTGAAAATACATAAATAGCCAACACTG  783

seq1  GCATTGGTATATTTAAAGTATCTAGAGTTTTATCACTAAAGGACCTTTAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTGGTATATTTAAAGTATCTAGAGTTTTATCACTAAAGGACCTTTAG  833

seq1  TTGGTGGACAAATGTGCTCAAAAGTTCCATGTCTTAGAACAGTTCACCAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTGGACAAATGTGCTCAAAAGTTCCATGTCTTAGAACAGTTCACCAT  883

seq1  TGAAATACAGTGAAGCACAGATGTGAGCCACGCCCATGATGTTAAACTTT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATACAGTGAAGCACAGATGTGAGCCACGCCCATGATGTTAAACTTT  933

seq1  CCCTGTTAGTATATTGGAAAAGTAAAGAAAGCAGGTGAAATTAATCATTT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGTTAGTATATTGGAAAAGTAAAGAAAGCAGGTGAAATTAATCATTT  983

seq1  ATTTCATTTTATTTTTTGATATACATGAATTATTACCATTTCAACATATA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCATTTTATTTTTTGATATACATGAATTATTACCATTTCAACATATA  1033

seq1  ATCACAATAAAATGTATTGCTGAGATATTTTTACAGGTCTTCATACTTAC  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACAATAAAATGTATTGCTGAGATATTTTTACAGGTCTTCATACTTAC  1083

seq1  TATGGAATTC  1110
      ||||||||||
seq2  TATGGAATTC  1093