BAC Information

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BAC

Clone NameB6Ng01-125G06
Chromosome10 (Build37)
Map Location 103,205,553 - 103,264,675
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC382413, Cart1, Lrriq1, LOC100043277, 6430590A10Rik, Slc6a15, EG667697, LOC667701
Downstream geneEG627488, EG667692, EG667695, LOC100043292
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-125G06.bB6Ng01-125G06.g
ACCDH928039DH928040
length3101,100
definitionDH928039|Mus musculus domesticus DNA, BAC clone: B6Ng01-125G06, 5' end.DH928040|Mus musculus domesticus DNA, BAC clone: B6Ng01-125G06, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(103,205,553 - 103,205,862)(103,263,564 - 103,264,675)
sequence
attaatttttgatcaactattcatggacatgagacctgtactggaatgat
ggatatattcatgtcattccatttgagtaaacgaattttctctttcctgg
catatatatatatgtgtgtgtgtgtgtgtgtgagtgtgtgtgtttgtgtg
tgtgtgtgtaatttcagttcctaacagtagtggctatgttttcattaatt
tattcattcaaaaaattttaaaatattacataatgaaataaaaactatga
tatcaaaaatgtgcaagataaaccaacataaggaaagaatcccatgggta
ggcaaaagaa
gaattcacctctttcaatgctgaatttgaaaagtagtcccattgctgcag
tgattaaagtaaataccatgaagtccatgttccactttgtaaatgttgat
cttaccactcaatgatcagagcctaaactagggacaaatacagaggaagg
ggctgatagggattgttaagtaaataatttgctgagtaaatgaacaatgc
tattacataattaaataatgttgtttcttgatgattaagatcaattcaca
caagcctttccagtctacttagtgggaaaacgataaagaacctttagtta
gaacttaggatgcctggaaagttccttgaaggtgaattaaataatcacaa
atgaaaactgccgctaaaagcaaccaagttattttttcagtcctatacat
tttactgtccttttttgctttttttttgttttcaattgtgaccattttca
ctttccattgaaaatcaaaatcgtttctctaagttagtttgacaagagaa
aaaaaaacgtattattaaagtcaaatgtaagttgaactttaattgtctca
catactcaggaagtgacagacattggaagttatattatttatgttaatcc
aggaactgccaatttaagaaacttggcaaacaagatacccaaagaacaaa
aatctagaaaagtattaatttatccaatatcaaaactgtactatttatga
gattttatgaaataaagagaacaatcattattatttgtactgtctataat
atataacatctaaagttaaactcaatgtataaagactcatagacattggt
ttttgtattatttgagaatgtgtgcaattaaagaggagtttgccagcttg
caatcccactaacaatgaagatagagtgttccttttcttcacatgattgc
cagcatctgctgtcacctgaatttttgatcttagccattctgactggtgg
tgaggtggaatcttaggtgtttgatttgcatttccctgatgattacgatg
ttgaatatttattttccacgtgcttctcagccatttgaattttcagttga
agtccttgtttagctttgtacacatttttaaaggttatttgatttctcta

quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_103205553_103205862
seq2: B6Ng01-125G06.b_55_364

seq1  ATTAATTTTTGATCAACTATTCATGGACATGAGACCTGTACTGGAATGAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAATTTTTGATCAACTATTCATGGACATGAGACCTGTACTGGAATGAT  50

seq1  GGATATATTCATGTCATTCCATTTGAGTAAACGAATTTTCTCTTTCCTGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATATATTCATGTCATTCCATTTGAGTAAACGAATTTTCTCTTTCCTGG  100

seq1  CATATATATATATGTGTGTGTGTGTGTGTGTGAGTGTGTGTGTTTGTGTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATATATATATGTGTGTGTGTGTGTGTGTGAGTGTGTGTGTTTGTGTG  150

seq1  TGTGTGTGTAATTTCAGTTCCTAACAGTAGTGGCTATGTTTTCATTAATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTAATTTCAGTTCCTAACAGTAGTGGCTATGTTTTCATTAATT  200

seq1  TATTCATTCAAAAAATTTTAAAATATTACATAATGAAATAAAAACTATGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCATTCAAAAAATTTTAAAATATTACATAATGAAATAAAAACTATGA  250

seq1  TATCAAAAATGTGCAAGATAAACCAACAGAAGGAAAGAAGCCCAAGGGTA  300
      |||||||||||||||||||||||||||| |||||||||| |||| |||||
seq2  TATCAAAAATGTGCAAGATAAACCAACATAAGGAAAGAATCCCATGGGTA  300

seq1  GGCAAAAGAA  310
      ||||||||||
seq2  GGCAAAAGAA  310

seq1: chr10_103263564_103264675
seq2: B6Ng01-125G06.g_65_1164 (reverse)

seq1  TAGA-AAATCAAATAACCCTATTAAAAAATGTGGTACAGAGCTAAACAAA  49
      |||| |||||||||||||   || |||||||| ||||| |||||||| ||
seq2  TAGAGAAATCAAATAACC---TTTAAAAATGT-GTACAAAGCTAAAC-AA  45

seq1  GAACTCTCAACTGAATAATACCAAATGGCTGAGAAGCACCTGAGAAAATA  99
      | ||| ||||||||| | |  |||||||||||||||||| || |||||||
seq2  GGACT-TCAACTGAAAATT--CAAATGGCTGAGAAGCACGTG-GAAAATA  91

seq1  AATATTCAACATCCTTAATCATCAGGGAAATGCAAATCAAAACAACCCTA  149
      |||||||||||| | ||||||||||||||||||||||| |||||  ||||
seq2  AATATTCAACAT-CGTAATCATCAGGGAAATGCAAATC-AAACA--CCTA  137

seq1  AGATTCCACCTCA-CACCAGTCAGAATGGCTAAGATCAAAAATTCAGGTG  198
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  AGATTCCACCTCACCACCAGTCAGAATGGCTAAGATCAAAAATTCAGGTG  187

seq1  ACAGCAGATGCTGGCAATCATGTGAAGAAAAAGGAACACTCTATCTTCAT  248
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  ACAGCAGATGCTGGCAATCATGTGAAG-AAAAGGAACACTCTATCTTCAT  236

seq1  TGTTAGTGGGATTGCAAGCTGGCAAACTCCTCTTTAATTGCACACATTCT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTAGTGGGATTGCAAGCTGGCAAACTCCTCTTTAATTGCACACATTCT  286

seq1  CAAATAATACAAAAACCAATGTCTATGAGTCTTTATACATTGAGTTTAAC  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATAATACAAAAACCAATGTCTATGAGTCTTTATACATTGAGTTTAAC  336

seq1  TTTAGATGTTATATATTATAGACAGTACAAATAATAATGATTGTTCTCTT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGATGTTATATATTATAGACAGTACAAATAATAATGATTGTTCTCTT  386

seq1  TATTTCATAAAATCTCATAAATAGTACAGTTTTGATATTGGATAAATTAA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTCATAAAATCTCATAAATAGTACAGTTTTGATATTGGATAAATTAA  436

seq1  TACTTTTCTAGATTTTTGTTCTTTGGGTATCTTGTTTGCCAAGTTTCTTA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTTTCTAGATTTTTGTTCTTTGGGTATCTTGTTTGCCAAGTTTCTTA  486

seq1  AATTGGCAGTTCCTGGATTAACATAAATAATATAACTTCCAATGTCTGTC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGGCAGTTCCTGGATTAACATAAATAATATAACTTCCAATGTCTGTC  536

seq1  ACTTCCTGAGTATGTGAGACAATTAAAGTTCAACTTACATTTGACTTTAA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCCTGAGTATGTGAGACAATTAAAGTTCAACTTACATTTGACTTTAA  586

seq1  TAATACGTTTTTTTTTCTCTTGTCAAACTAACTTAGAGAAACGATTTTGA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATACGTTTTTTTTTCTCTTGTCAAACTAACTTAGAGAAACGATTTTGA  636

seq1  TTTTCAATGGAAAGTGAAAATGGTCACAATTGAAAACAAAAAAAAAGCAA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCAATGGAAAGTGAAAATGGTCACAATTGAAAACAAAAAAAAAGCAA  686

seq1  AAAAGGACAGTAAAATGTATAGGACTGAAAAAATAACTTGGTTGCTTTTA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGGACAGTAAAATGTATAGGACTGAAAAAATAACTTGGTTGCTTTTA  736

seq1  GCGGCAGTTTTCATTTGTGATTATTTAATTCACCTTCAAGGAACTTTCCA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGGCAGTTTTCATTTGTGATTATTTAATTCACCTTCAAGGAACTTTCCA  786

seq1  GGCATCCTAAGTTCTAACTAAAGGTTCTTTATCGTTTTCCCACTAAGTAG  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATCCTAAGTTCTAACTAAAGGTTCTTTATCGTTTTCCCACTAAGTAG  836

seq1  ACTGGAAAGGCTTGTGTGAATTGATCTTAATCATCAAGAAACAACATTAT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGAAAGGCTTGTGTGAATTGATCTTAATCATCAAGAAACAACATTAT  886

seq1  TTAATTATGTAATAGCATTGTTCATTTACTCAGCAAATTATTTACTTAAC  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATTATGTAATAGCATTGTTCATTTACTCAGCAAATTATTTACTTAAC  936

seq1  AATCCCTATCAGCCCCTTCCTCTGTATTTGTCCCTAGTTTAGGCTCTGAT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCCTATCAGCCCCTTCCTCTGTATTTGTCCCTAGTTTAGGCTCTGAT  986

seq1  CATTGAGTGGTAAGATCAACATTTACAAAGTGGAACATGGACTTCATGGT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGAGTGGTAAGATCAACATTTACAAAGTGGAACATGGACTTCATGGT  1036

seq1  ATTTACTTTAATCACTGCAGCAATGGGACTACTTTTCAAATTCAGCATTG  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTACTTTAATCACTGCAGCAATGGGACTACTTTTCAAATTCAGCATTG  1086

seq1  AAAGAGGTGAATTC  1112
      ||||||||||||||
seq2  AAAGAGGTGAATTC  1100