BAC Information

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BAC

Clone NameB6Ng01-125O06
Chromosome10 (Build37)
Map Location 106,672,271 - 106,673,397
singlet/doubletsinglet
Overlap genenone
Upstream genePpfia2, Olfr1556-ps1, 8430416H19Rik
Downstream geneLin7a, Myf5, Myf6, Ptprq, EG628870, Ppp1r12a
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-125O06.bB6Ng01-125O06.g
ACCDH928400DH928401
length1,107617
definitionDH928400|Mus musculus domesticus DNA, BAC clone: B6Ng01-125O06, 5' end.DH928401|Mus musculus domesticus DNA, BAC clone: B6Ng01-125O06, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctgcgtttgtatcaaataaaggcaagccctgagactaagccttaa
ttgggagctgctaggaagagaaaaatgaaatgtgtttcctggatgggccc
tttagaatcctccaaatgcacttgatgtctttcttgtctgttgctatgct
agctgttcctctggcatattgtgaacttgctgactgtcagagcggttatg
gaattcggaagacaatgatggagggagtggagtgtgaggcaaaatgtcac
agtgctcattgtctttgctgactttcagccatcgttcttctccatgcagt
tttaagatttgggttgattttccaagttttaaagtagctaatttaggtaa
ttgtttgtattctcattatttcctgagtggatgatttcagagtttttggt
ttctgctttgttgtgttttttttgttgttgttgtttgttttgttttattc
tgacacccagatgtgccttcactcttgtttcggtggtatcttaaccttct
aaaatagatgcattctattctaccttgtcagagtttacatcatattgatt
tttctagtctacctgaaaggacagcgacaaagattatggttcagtagcca
ggattcctgaggcaacttttacatttgtttgtctttatttctcttccctt
ttgctcagtctatcactaggtacaaatgattctttacatgatcctcacat
ttgcccactttttggtgtcctcagggaaaacagtctcgctgaggacctca
ttattttactccccaattctttactgaccttgtaacctgcctgttcccct
accagactatttctaccatttaaacactctgtagaccttgggagtttcaa
aaaacaaaatagccctttgtgctttaattttcaatgccttcctattttct
taagagaatggtaagcatcctttgcctcttctaaatatatttaagcgatt
tcacctggtttgctcttctagatattattaagcatttcaccttgtttgga
tgaatactaattataccatcatataatatcaactactatttcgtgataaa
gcagactggctttcagactgtctgtctcaaagtttgaaccagccctgtgc
aaatgta

gaattctcagtttagttctataccccatttttttgattgggttgttcttt
ttttgttgttgttgttgttgtttggttggttggtttttggtttttgaact
tctttagttctttatatattttggatattggccctctatctgatgtgggg
ttagtgaagattttttttctcaatatgtaggttgttgatttgttttattg
actatgtccttagcctaacagaaacttttcagtttcatgaggtcccattt
atcaattcttgaccttaggacataagctaagagtgttctgtacaggaaat
ttccccctgtgccaatgagttcaaggctctttcccgccttctcttctatt
agattcagtgtatctggttttatgttgaggtccttgatttacttagactt
aagttttgtacaaggtgacaaatatgggtctacatacagacagtcagttg
gaacaacaccatttattgaagatgctttcttttttccattatgtattttt
ggcttctttgtaaaagaaatcaagtgtccataaatgtgtggtttttattt
ctgtgtctttgattctattccattgatcaatgtgtctgtctctgtaccaa
tatgtttgcagtcttta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_106672271_106673397
seq2: B6Ng01-125O06.b_48_1154 (reverse)

seq1  TACATTTGCACCAGGCTTTGTTCAAATACTTTGAGGCCAGAACTGTCATG  50
      |||||||||| ||||  | ||||||  ||||||| | ||| || ||| ||
seq2  TACATTTGCA-CAGGGCTGGTTCAA--ACTTTGA-GACAG-ACAGTC-TG  44

seq1  AAAGCCAGTCTGCTTTATCACAGAACTAGTAGTCTGATATACTATGTTGG  100
      ||||||||||||||||||||| ||| ||||||| ||||||  |||| |||
seq2  AAAGCCAGTCTGCTTTATCAC-GAAATAGTAGT-TGATATTATATGATGG  92

seq1  TATTAATTAAGTATTCATCCAAACCAAGGTGAAATTGCTTAAATAATAAT  150
      || ||||| |||||||||||||| |||||||||| ||||| |||||| ||
seq2  TA-TAATT-AGTATTCATCCAAA-CAAGGTGAAA-TGCTT-AATAAT-AT  136

seq1  CTAGAAGAGGCAAACCAAGGTGAAATCGCTTAAATAATAATTTAGAAGAG  200
      |||||||| ||||||| |||||||||||||||||||   |||||||||||
seq2  CTAGAAGA-GCAAACC-AGGTGAAATCGCTTAAATA--TATTTAGAAGAG  182

seq1  GCAAAGGATGCTTACCATTCTCTTAAGAAAATAGGAAGGCATTGAAAACT  250
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  GCAAAGGATGCTTACCATTCTCTTAAGAAAATAGGAAGGCATTGAAAA-T  231

seq1  TAAAGCACAAAGGGCTATTTTTGTTTTTTTGAAACTCCCAAGGTCTACAG  300
      |||||||||||||||||||||   ||||||||||||||||||||||||||
seq2  TAAAGCACAAAGGGCTATTTT--GTTTTTTGAAACTCCCAAGGTCTACAG  279

seq1  AGTGTTTAAATGGTAG-AATAGTCTGGTAGGGGAACAGGCAGGTTACAAG  349
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  AGTGTTTAAATGGTAGAAATAGTCTGGTAGGGGAACAGGCAGGTTACAAG  329

seq1  GTCAGTAAAGAATTGGGGAGTAAAATAATGAGGTCCTCAGCGAGACTGTT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGTAAAGAATTGGGGAGTAAAATAATGAGGTCCTCAGCGAGACTGTT  379

seq1  TTCCCTGAGGACACCAAAAAGTGGGCAAATGTGAGGATCATGTAAAGAAT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCTGAGGACACCAAAAAGTGGGCAAATGTGAGGATCATGTAAAGAAT  429

seq1  CATTTGTACCTAGTGATAGACTGAGCAAAAGGGAAGAGAAATAAAGACAA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTGTACCTAGTGATAGACTGAGCAAAAGGGAAGAGAAATAAAGACAA  479

seq1  ACAAATGTAAAAGTTGCCTCAGGAATCCTGGCTACTGAACCATAATCTTT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAATGTAAAAGTTGCCTCAGGAATCCTGGCTACTGAACCATAATCTTT  529

seq1  GTCGCTGTCCTTTCAGGTAGACTAGAAAAATCAATATGATGTAAACTCTG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCGCTGTCCTTTCAGGTAGACTAGAAAAATCAATATGATGTAAACTCTG  579

seq1  ACAAGGTAGAATAGAATGCATCTATTTTAGAAGGTTAAGATACCACCGAA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGGTAGAATAGAATGCATCTATTTTAGAAGGTTAAGATACCACCGAA  629

seq1  ACAAGAGTGAAGGCACATCTGGGTGTCAGAATAAAACAAAACAAACAACA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGAGTGAAGGCACATCTGGGTGTCAGAATAAAACAAAACAAACAACA  679

seq1  ACAACAAAAAAAACACAACAAAGCAGAAACCAAAAACTCTGAAATCATCC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACAAAAAAAACACAACAAAGCAGAAACCAAAAACTCTGAAATCATCC  729

seq1  ACTCAGGAAATAATGAGAATACAAACAATTACCTAAATTAGCTACTTTAA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAGGAAATAATGAGAATACAAACAATTACCTAAATTAGCTACTTTAA  779

seq1  AACTTGGAAAATCAACCCAAATCTTAAAACTGCATGGAGAAGAACGATGG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTGGAAAATCAACCCAAATCTTAAAACTGCATGGAGAAGAACGATGG  829

seq1  CTGAAAGTCAGCAAAGACAATGAGCACTGTGACATTTTGCCTCACACTCC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAAGTCAGCAAAGACAATGAGCACTGTGACATTTTGCCTCACACTCC  879

seq1  ACTCCCTCCATCATTGTCTTCCGAATTCCATAACCGCTCTGACAGTCAGC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCCTCCATCATTGTCTTCCGAATTCCATAACCGCTCTGACAGTCAGC  929

seq1  AAGTTCACAATATGCCAGAGGAACAGCTAGCATAGCAACAGACAAGAAAG  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTCACAATATGCCAGAGGAACAGCTAGCATAGCAACAGACAAGAAAG  979

seq1  ACATCAAGTGCATTTGGAGGATTCTAAAGGGCCCATCCAGGAAACACATT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCAAGTGCATTTGGAGGATTCTAAAGGGCCCATCCAGGAAACACATT  1029

seq1  TCATTTTTCTCTTCCTAGCAGCTCCCAATTAAGGCTTAGTCTCAGGGCTT  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTTTCTCTTCCTAGCAGCTCCCAATTAAGGCTTAGTCTCAGGGCTT  1079

seq1  GCCTTTATTTGATACAAACGCAGAATTC  1127
      ||||||||||||||||||||||||||||
seq2  GCCTTTATTTGATACAAACGCAGAATTC  1107


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