BAC Information

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BAC

Clone NameB6Ng01-125P05
Chromosome10 (Build37)
Map Location 69,097,167 - 69,205,626
singlet/doubletdoublet
Overlap geneAnk3, LOC100039734
Upstream geneEG665342, Tmem26, A930033H14Rik, Rhobtb1, LOC100040182, Cdc2a, LOC100039696, EG382371
Downstream gene5730416O20Rik, Ccdc6, 2310015B20Rik, Slc16a9, LOC632955, 1200015N20Rik, LOC665398, Phyhipl, EG665429
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-125P05.bB6Ng01-125P05.g
ACCDH928444DH928445
length1,0991,059
definitionDH928444|Mus musculus domesticus DNA, BAC clone: B6Ng01-125P05, 5' end.DH928445|Mus musculus domesticus DNA, BAC clone: B6Ng01-125P05, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(69,204,520 - 69,205,626)(69,097,167 - 69,098,236)
sequence
gaattctgtcagtgaccagcacggaagagctgtgcttggcttctgtgtct
ccatgacgtcatggagacagtgttgtctccacagagcactgccacaatgt
atcaaggtcttaaacagctcattcctcccccaccccctccccggcctggt
ccacctcctatgatacagtcagctagatgagtccccagcatgctttgtga
attgctgactgttccatgagtatgaaaagacagggttgaggttgatgctc
ttctctttcctcaacccctgctggctaagacagatgctatacttgttgca
agaaatgagagagaagatttgaagaccctgtatgtagggctgaggacttc
aggccctgcagattatctcactggagttatggctttcgagaaaaggcaca
cgcgcttgctcttctaggtagggaattttcatcgccacagaacctcatct
gtcttatcttcagacacaaacgcacatgggattggatcgatttgataaga
tttggtaaattcttaataggaaataataagtggaatcaatattattttca
cactgctttccaaatctggcagaactaacaactgcagtcaggcaaatctt
cacaccattttgcttgcaaatcccccaaataaagaactttaaagatgcct
taaaaatagcccttgccctagttttcttagctcttgcttagacactgttt
aaggaaaaggactagaatgtaagctgggtgtctaatgttaatttttcccc
tcttgtcctagtcacaaaaaaaaaaaaaaaaaagagatcccttagcatct
cctcaaaattgtggtggtataaaaagtgtagtggccatgtataatctgag
cttatggatcttccattaaaaacattcttcccttttgatttatacctaaa
gcacagatggctttctgttttcccaaaagagaattctaccttcaacattt
ctattaaggaaacagcccgaatctgaaattcttcacgactgattctacaa
acaatggccctttttacttttactttgggctcatgtaaacacagatacaa
tctctatagaatatgcttggtatttaaaattatatatggacaacgacta
gaattcagggtctgttccctgggtatacccaggggtaagattctttcaga
tacttcctggaattgtataactcattagtaaaagtcctcatatggggtct
tagtggtaaattttttaaaaatgcacaagaatctactttcaccatagaaa
cgcagtcagaaaacaaaatagagctttggcaagtttgccttggaaagcca
gacaggcatattgcctggcttggtggattctagatccagactaagctgga
acaggcagagcaactgttgttatcagcattgtgtttttaagtttaggatc
cagattctgcatttgtgtcacaggtataaaattggctctgtgaggctagg
gagagagcccaggcataaagcatgaggacctatgacccagcatgcatgtg
agaagcgactcggtgcctcgggctcccacagtccctcaaatctgcgcaga
tagctgtgcgctggcaagacttaccttaacaaggttggaaaggtaagaca
gggaatggcagctgcacaaggaacagtgtaaggactggagaatcaagcaa
gttctggagaaaggggcttggctgtagacccaaggccctaggacagaaca
gacctttttttggctcagtttctatattatcatcagctggtaggtgcctg
gggggcctttggaaaatgtccgtacctaggcatcatgccagccaattaaa
tcggagtctctgggggcagaagcccaggcttggtatgttgaaaaataaaa
aatctcccctcaaggggtttcactgtgcatctgagcagaaaccccactga
ttttgttttgtagatcgattataaacctgatcagaaaccggctgccagta
tgggctgagaaggctcggtggtagatggtttacctggccctaggtgagac
cctagctgcaccccaaacaagcatagcagcaacgaagctatattttcctt
tttaggtactgcatggggaaatagaaattcagagactttgactaaattac
agtgattccaggtctctaagagtggtggcttcctagagaggtgtgacaga
cgtagcaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_69204520_69205626
seq2: B6Ng01-125P05.b_49_1147 (reverse)

seq1  TAGTCGTTTGTCCATATATAATTTTTAAATCACCAAGGCATATTCTATAA  50
      |||||| |||||||||||||| |||||||| ||||| |||||||||||| 
seq2  TAGTCG-TTGTCCATATATAA-TTTTAAAT-ACCAA-GCATATTCTATAG  46

seq1  AGAGAATTTGTAATCTGTGTTTACATGAAGCCAAAAGTAAAAGTAAAAAG  100
      |||    |||| ||||||||||||||| |||| |||||||||||||||||
seq2  AGA----TTGT-ATCTGTGTTTACATG-AGCCCAAAGTAAAAGTAAAAAG  90

seq1  GGCCATTG-TTGTAGAATCAGTCGTGAAGAATTTCAGATTCGGGGCTGTT  149
      |||||||| |||||||||||||||||||||||||||||||| ||||||||
seq2  GGCCATTGTTTGTAGAATCAGTCGTGAAGAATTTCAGATTC-GGGCTGTT  139

seq1  TCCTTAATAGAAATGTTGAAGGTAGAATTCTCTTTTGGGAAAACAGAAAG  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTAATAGAAATGTTGAAGGTAGAATTCTCTTTTGGGAAAACAGAAAG  189

seq1  CCATCTGTGCCTTAGGTATAAATCAAAA-GGAAGAATGTTTTTAATGGAA  248
      |||||||||| ||||||||||||||||| |||||||||||||||||||||
seq2  CCATCTGTGCTTTAGGTATAAATCAAAAGGGAAGAATGTTTTTAATGGAA  239

seq1  GATCCATAAGCTCAGATTATACATGGCCACTACACTTTTTATACCACCAC  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCCATAAGCTCAGATTATACATGGCCACTACACTTTTTATACCACCAC  289

seq1  AATTTTGAGGAGATGCTAAGGGATCTC-TTTTTTTTTTTTTTTTTGTGAC  347
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  AATTTTGAGGAGATGCTAAGGGATCTCTTTTTTTTTTTTTTTTTTGTGAC  339

seq1  TAGGACAAGAGGGGAAAAATTAACATTAGACACCCAGCTTACATTCTAGT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGACAAGAGGGGAAAAATTAACATTAGACACCCAGCTTACATTCTAGT  389

seq1  CCTTTTCCTTAAACAGTGTCTAAGCAAGAGCTAAGAAAACTAGGGCAAGG  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTTCCTTAAACAGTGTCTAAGCAAGAGCTAAGAAAACTAGGGCAAGG  439

seq1  GCTATTTTTAAGGCATCTTTAAAGTTCTTTATTTGGGGGATTTGCAAGCA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATTTTTAAGGCATCTTTAAAGTTCTTTATTTGGGGGATTTGCAAGCA  489

seq1  AAATGGTGTGAAGATTTGCCTGACTGCAGTTGTTAGTTCTGCCAGATTTG  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGGTGTGAAGATTTGCCTGACTGCAGTTGTTAGTTCTGCCAGATTTG  539

seq1  GAAAGCAGTGTGAAAATAATATTGATTCCACTTATTATTTCCTATTAAGA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGCAGTGTGAAAATAATATTGATTCCACTTATTATTTCCTATTAAGA  589

seq1  ATTTACCAAATCTTATCAAATCGATCCAATCCCATGTGCGTTTGTGTCTG  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTACCAAATCTTATCAAATCGATCCAATCCCATGTGCGTTTGTGTCTG  639

seq1  AAGATAAGACAGATGAGGTTCTGTGGCGATGAAAATTCCCTACCTAGAAG  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATAAGACAGATGAGGTTCTGTGGCGATGAAAATTCCCTACCTAGAAG  689

seq1  AGCAAGCGCGTGTGCCTTTTCTCGAAAGCCATAACTCCAGTGAGATAATC  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAGCGCGTGTGCCTTTTCTCGAAAGCCATAACTCCAGTGAGATAATC  739

seq1  TGCAGGGCCTGAAGTCCTCAGCCCTACATACAGGGTCTTCAAATCTTCTC  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGGGCCTGAAGTCCTCAGCCCTACATACAGGGTCTTCAAATCTTCTC  789

seq1  TCTCATTTCTTGCAACAAGTATAGCATCTGTCTTAGCCAGCAGGGGTTGA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCATTTCTTGCAACAAGTATAGCATCTGTCTTAGCCAGCAGGGGTTGA  839

seq1  GGAAAGAGAAGAGCATCAACCTCAACCCTGTCTTTTCATACTCATGGAAC  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAGAGAAGAGCATCAACCTCAACCCTGTCTTTTCATACTCATGGAAC  889

seq1  AGTCAGCAATTCACAAAGCATGCTGGGGACTCATCTAGCTGACTGTATCA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAGCAATTCACAAAGCATGCTGGGGACTCATCTAGCTGACTGTATCA  939

seq1  TAGGAGGTGGACCAGGCCGGGGAGGGGGTGGGGGAGGAATGAGCTGTTTA  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGAGGTGGACCAGGCCGGGGAGGGGGTGGGGGAGGAATGAGCTGTTTA  989

seq1  AGACCTTGATACATTGTGGCAGTGCTCTGTGGAGACAACACTGTCTCCAT  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCTTGATACATTGTGGCAGTGCTCTGTGGAGACAACACTGTCTCCAT  1039

seq1  GACGTCATGGAGACACAGAAGCCAAGCACAGCTCTTCCGTGCTGGTCACT  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACGTCATGGAGACACAGAAGCCAAGCACAGCTCTTCCGTGCTGGTCACT  1089

seq1  GACAGAATTC  1107
      ||||||||||
seq2  GACAGAATTC  1099

seq1: chr10_69097167_69098236
seq2: B6Ng01-125P05.g_69_1127

seq1  GAATTCAGGGTCTGTTCCCTGGGTATACCCAGGGGTAAGATTCTTTCAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGGTCTGTTCCCTGGGTATACCCAGGGGTAAGATTCTTTCAGA  50

seq1  TACTTCCTGGAATTGTATAACTCATTAGTAAAAGTCCTCATATGGGGTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTCCTGGAATTGTATAACTCATTAGTAAAAGTCCTCATATGGGGTCT  100

seq1  TAGTGGTAAATTTTTTAAAAATGCACAAGAATCTACTTTCACCATAGAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGGTAAATTTTTTAAAAATGCACAAGAATCTACTTTCACCATAGAAA  150

seq1  CGCAGTCAGAAAACAAAATAGAGCTTTGGCAAGTTTGCCTTGGAAAGCCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCAGTCAGAAAACAAAATAGAGCTTTGGCAAGTTTGCCTTGGAAAGCCA  200

seq1  GACAGGCATATTGCCTGGCTTGGTGGATTCTAGATCCAGACTAAGCTGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGGCATATTGCCTGGCTTGGTGGATTCTAGATCCAGACTAAGCTGGA  250

seq1  ACAGGCAGAGCAACTGTTGTTATCAGCATTGTGTTTTTAAGTTTAGGATC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGCAGAGCAACTGTTGTTATCAGCATTGTGTTTTTAAGTTTAGGATC  300

seq1  CAGATTCTGCATTTGTGTCACAGGTATAAAATTGGCTCTGTGAGGCTAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATTCTGCATTTGTGTCACAGGTATAAAATTGGCTCTGTGAGGCTAGG  350

seq1  GAGAGAGCCCAGGCATAAAGCATGAGGACCTATGACCCAGCATGCATGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAGCCCAGGCATAAAGCATGAGGACCTATGACCCAGCATGCATGTG  400

seq1  AGAAGCGACTCGGTGCCTCGGGCTCCCACAGTCCCTCAAATCTGCGCAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGCGACTCGGTGCCTCGGGCTCCCACAGTCCCTCAAATCTGCGCAGA  450

seq1  TAGCTGTGCGCTGGCAAGACTTACCTTAACAAGGTTGGAAAGGTAAGACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTGTGCGCTGGCAAGACTTACCTTAACAAGGTTGGAAAGGTAAGACA  500

seq1  GGGAATGGCAGCTGCACAAGGAACAGTGTAAGGACTGGAGAATCAAGCAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAATGGCAGCTGCACAAGGAACAGTGTAAGGACTGGAGAATCAAGCAA  550

seq1  GTTCTGGAGAAAGGGGCTTGGCTGTAGACCCAAGGCCCTAGGACAGAACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTGGAGAAAGGGGCTTGGCTGTAGACCCAAGGCCCTAGGACAGAACA  600

seq1  GACCTTTTTTTGGCTCAGTTTCTATATTATCATCAGCTGGTAGGTGCCTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTTTTTTTGGCTCAGTTTCTATATTATCATCAGCTGGTAGGTGCCTG  650

seq1  GGGGGCCTTTGGAAAATGTCCGTACCTAGGCATCATGCCAGCCAATTAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGCCTTTGGAAAATGTCCGTACCTAGGCATCATGCCAGCCAATTAAA  700

seq1  TCGGAGTCTCTGGGGGCAGAAGCCCAGGCTTGGTATGTTGAAAAATAAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGGAGTCTCTGGGGGCAGAAGCCCAGGCTTGGTATGTTGAAAAATAAAA  750

seq1  AATCTCCCCTCAAGGGGTTTCACTGTGCATCTGAGGCAGAAACCCCACTG  800
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  AATCTCCCCTCAAGGGGTTTCACTGTGCATCTGA-GCAGAAACCCCACTG  799

seq1  ATTTTGTTTTGTAGATCGATTATAAACCTGATCAGAAACCGGCTGCCAGG  850
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  ATTTTGTTTTGTAGATCGATTATAAACCTGATCAGAAACCGGCTGCCA-G  848

seq1  TATGGGCTGAGAAGGCTCGGTGGTAGATGGTTTACCTGG-CCTAGGTGAG  899
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  TATGGGCTGAGAAGGCTCGGTGGTAGATGGTTTACCTGGCCCTAGGTGAG  898

seq1  ACCCTAGGCTGCACCCCAAAACAAGCAATAGCAGCAACGAAGCTATATTT  949
      |||||| |||||||||| |||||||| |||||||||||||||||||||||
seq2  ACCCTA-GCTGCACCCC-AAACAAGC-ATAGCAGCAACGAAGCTATATTT  945

seq1  TCCTTTTTAGGGTACTGCATGGGGAAATAGAAATTCAGGAAGACTATGAC  999
      ||||||||| ||||||||||||||||||||||||||||  ||||| ||||
seq2  TCCTTTTTA-GGTACTGCATGGGGAAATAGAAATTCAG--AGACTTTGAC  992

seq1  TAAAATTACAAGTGATTCCAGGTCTCTAAGAAGTGGTGGCTCCCTAGAGA  1049
      | ||||||| |||||||||||||||||||| |||||||||| ||||||||
seq2  T-AAATTAC-AGTGATTCCAGGTCTCTAAG-AGTGGTGGCTTCCTAGAGA  1039

seq1  GTGTG-GACAGACAGTAGCAGA  1070
      | ||| ||||||| ||||||||
seq2  G-GTGTGACAGAC-GTAGCAGA  1059