BAC Information

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BAC

Clone NameB6Ng01-126E14
Chromosome10 (Build37)
Map Location 107,725,991 - 107,843,779
singlet/doubletdoublet
Overlap genePawr
Upstream geneLin7a, Myf5, Myf6, Ptprq, EG628870, Ppp1r12a
Downstream geneEG667814, Syt1, EG368203
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-126E14.bB6Ng01-126E14.g
ACCDH928693DH928694
length1,156703
definitionDH928693|Mus musculus domesticus DNA, BAC clone: B6Ng01-126E14, 5' end.DH928694|Mus musculus domesticus DNA, BAC clone: B6Ng01-126E14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(107,842,605 - 107,843,779)(107,725,991 - 107,726,693)
sequence
gaattcagctgagacagcaagggtttctctaacgctcacagtctgatgta
agctttcaagtatggcggctttgtcattaccagagtgcacatttgtcccg
gatgtctctggaatgactttaactgtcaccattcaattttctactggtgt
cagaataagaaaaaagtgtttccttattttaaaacatccagtaaaacctg
ctttgttgatagtaaattagaattcaagataaatacaaattccctaagag
ttagttaggaagcattctaaaaagccaaaacttaagataatgaaaatgca
cattttttgagtcccaaatgaccaacacaaacataccatatgctctaaca
gccttgctgtgcctgactaacacacagcttcccactgtccctgtacccct
ctatccactatgcagacatgaccagtctatactccaggcacaagtctgtc
cactagccatgaactcagaagaaaacatgaccatagaaaatgcagcttgg
ggacgcgcaaggctccctctagaagtcttcagtcaggctgtcatggatgg
caataaactgtcccaagggccctgctccgggcagcactgtgctgcgggtt
taaaacctactttcagaagtctaaggtacacacacatacaggaatcagag
cgcagagagcagccttgcagcagggcagccccaggaggcttaaacataaa
cgcaaacagaagataagaggatagaaaagcaagcaggagacccgaaagct
attttacagaagaattcaaactaattcaaactcaacagtctccagtgttt
taggggcaaacctatcttgaaatgtgtgtttgtttacccgctattttgtg
ggatttatgatcatcatataaagtagtaagtattagctgtgttgccaaat
atagtatacaaaggattggaaaactcccaaattgttttatttgtgttaca
atatttgtcctataggaatgactatttaaatttttaaaatgttttagaat
atgcatatgtgtcattctttctgagatcttttaatactcatgataagaaa
ttcagagagatctattctttttgtatatttgcttatgactatcaaggatg
ttagaatctggaagatgtctagagctactagatctcaaatcatgtttagc
ctagga
gaattcaccccatttagaaaactatgtaaatgatagaggactccaaggtg
gacccagacttttccaggaacctaagcacggatataacatcagaagtcga
tagaggggggaaaaagaaaggattgagggctttggattacctaagggaaa
taataacattactgacccttatcggaattattttacaagcagaaataaat
tctgacaaactatgtggttaaatgggaaagtaaaacctcagtatttcaaa
taaaatatagcacacagcttttgttactctaaagtcaaaatacaagagaa
gcgctcgaggcgaggatccttcatgaacgtggaggtttttttgggattca
gacccaggcaagaggttaaggggcctgtttaacagactaacgcagacctg
gcctccaggttctcccatgatccctcggtccctaccagttacaggtcata
ctctgccctctatgctgaactttccagtttaggccagaggctgggctttc
tctcaaccagaggctgttcactatgatctggatattttggtcctccctct
atccctccccaccaccccaccctgcttcaccccacacacatgcttgcttt
tccttccttcgctccctccctccttcctaacttccctccatctgcctgtc
ttttctctctcaatctctctctctctctctctctctctctctctctctct
ctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_107842605_107843779
seq2: B6Ng01-126E14.b_51_1206 (reverse)

seq1  TCCTAAGCTAAACATGATTTTGAGATCTTAAGTAAGCTTCCTAGACATCT  50
      ||||| ||||||||||| ||||||||||  ||| ||||  ||||||||||
seq2  TCCTAGGCTAAACATGA-TTTGAGATCT--AGT-AGCT--CTAGACATCT  44

seq1  TCCAGA-TCTTACATCTCTGTGATAGTCATTAAAGCAAATATACACATAG  99
      |||||| ||| ||||| || ||||||||||  ||||||||||||| | ||
seq2  TCCAGATTCTAACATC-CT-TGATAGTCAT--AAGCAAATATACAAAAAG  90

seq1  -ATAGATCCTTCTCTGAATTTCTGTATCATGAGGTATTAAAAGATCTTCA  148
       |||||||  ||||||||||||| |||||||| ||||||||||||| |||
seq2  AATAGATC--TCTCTGAATTTCT-TATCATGA-GTATTAAAAGATC-TCA  135

seq1  GAAAGAATGACACATATGCAATATTCTTAAAAACATTTTAAAAATTTAAA  198
      ||||||||||||||||||| |||||||  |||||||||||||||||||||
seq2  GAAAGAATGACACATATGC-ATATTCT--AAAACATTTTAAAAATTTAAA  182

seq1  TAGTCATTTCCTATAGGACAAATATTGTAACACAAATAAAACAATTTGGG  248
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTCA-TTCCTATAGGACAAATATTGTAACACAAATAAAACAATTTGGG  231

seq1  AGTTTTTCCAATCCTTTGTATACTATATTTTGGCAACACAGCTAATACTT  298
      || |||||||||||||||||||||||| ||||||||||||||||||||||
seq2  AG-TTTTCCAATCCTTTGTATACTATA-TTTGGCAACACAGCTAATACTT  279

seq1  ACTACTTTATATGATGATCATAAATCCCACAAAATAGCGGGTAAACAAAC  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACTTTATATGATGATCATAAATCCCACAAAATAGCGGGTAAACAAAC  329

seq1  ACACATTTCAAGATAGGTTTGCCCCTAAAACACTGGAGACTGTTGAGTTT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACATTTCAAGATAGGTTTGCCCCTAAAACACTGGAGACTGTTGAGTTT  379

seq1  GAATTAGTTTGAATTCTTCTGTAAAATAGCTTTCGGGTCTCCTGCTTGCT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTAGTTTGAATTCTTCTGTAAAATAGCTTTCGGGTCTCCTGCTTGCT  429

seq1  TTTCTATCCTCTTATCTTCTGTTTGCGTTTATGTTTAAGCCTCCTGGGGC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTATCCTCTTATCTTCTGTTTGCGTTTATGTTTAAGCCTCCTGGGGC  479

seq1  TGCCCTGCTGCAAGGCTGCTCTCTGCGCTCTGATTCCTGTATGTGTGTGT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCTGCTGCAAGGCTGCTCTCTGCGCTCTGATTCCTGTATGTGTGTGT  529

seq1  ACCTTAGACTTCTGAAAGTAGGTTTTAAACCCGCAGCACAGTGCTGCCCG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTAGACTTCTGAAAGTAGGTTTTAAACCCGCAGCACAGTGCTGCCCG  579

seq1  GAGCAGGGCCCTTGGGACAGTTTATTGCCATCCATGACAGCCTGACTGAA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAGGGCCCTTGGGACAGTTTATTGCCATCCATGACAGCCTGACTGAA  629

seq1  GACTTCTAGAGGGAGCCTTGCGCGTCCCCAAGCTGCATTTTCTATGGTCA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTCTAGAGGGAGCCTTGCGCGTCCCCAAGCTGCATTTTCTATGGTCA  679

seq1  TGTTTTCTTCTGAGTTCATGGCTAGTGGACAGACTTGTGCCTGGAGTATA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTCTTCTGAGTTCATGGCTAGTGGACAGACTTGTGCCTGGAGTATA  729

seq1  GACTGGTCATGTCTGCATAGTGGATAGAGGGGTACAGGGACAGTGGGAAG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGGTCATGTCTGCATAGTGGATAGAGGGGTACAGGGACAGTGGGAAG  779

seq1  CTGTGTGTTAGTCAGGCACAGCAAGGCTGTTAGAGCATATGGTATGTTTG  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGTGTTAGTCAGGCACAGCAAGGCTGTTAGAGCATATGGTATGTTTG  829

seq1  TGTTGGTCATTTGGGACTCAAAAAATGTGCATTTTCATTATCTTAAGTTT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGGTCATTTGGGACTCAAAAAATGTGCATTTTCATTATCTTAAGTTT  879

seq1  TGGCTTTTTAGAATGCTTCCTAACTAACTCTTAGGGAATTTGTATTTATC  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTTTTTAGAATGCTTCCTAACTAACTCTTAGGGAATTTGTATTTATC  929

seq1  TTGAATTCTAATTTACTATCAACAAAGCAGGTTTTACTGGATGTTTTAAA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAATTCTAATTTACTATCAACAAAGCAGGTTTTACTGGATGTTTTAAA  979

seq1  ATAAGGAAACACTTTTTTCTTATTCTGACACCAGTAGAAAATTGAATGGT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGGAAACACTTTTTTCTTATTCTGACACCAGTAGAAAATTGAATGGT  1029

seq1  GACAGTTAAAGTCATTCCAGAGACATCCGGGACAAATGTGCACTCTGGTA  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGTTAAAGTCATTCCAGAGACATCCGGGACAAATGTGCACTCTGGTA  1079

seq1  ATGACAAAGCCGCCATACTTGAAAGCTTACATCAGACTGTGAGCGTTAGA  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACAAAGCCGCCATACTTGAAAGCTTACATCAGACTGTGAGCGTTAGA  1129

seq1  GAAACCCTTGCTGTCTCAGCTGAATTC  1175
      |||||||||||||||||||||||||||
seq2  GAAACCCTTGCTGTCTCAGCTGAATTC  1156

seq1: chr10_107725991_107726693
seq2: B6Ng01-126E14.g_68_770

seq1  GAATTCACCCCATTTAGAAAACTATGTAAATGATAGAGGACTCCAAGGTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACCCCATTTAGAAAACTATGTAAATGATAGAGGACTCCAAGGTG  50

seq1  GACCCAGACTTTTCCAGGAACCTAAGCACGGATATAACATCAGAAGTCGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCCAGACTTTTCCAGGAACCTAAGCACGGATATAACATCAGAAGTCGA  100

seq1  TAGAGGGGGGAAAAAGAAAGGATTGAGGGCTTTGGATTACCTAAGGGAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGGGGGGAAAAAGAAAGGATTGAGGGCTTTGGATTACCTAAGGGAAA  150

seq1  TAATAACATTACTGACCCTTATCGGAATTATTTTACAAGCAGAAATAAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAACATTACTGACCCTTATCGGAATTATTTTACAAGCAGAAATAAAT  200

seq1  TCTGACAAACTATGTGGTTAAATGGGAAAGTAAAACCTCAGTATTTCAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGACAAACTATGTGGTTAAATGGGAAAGTAAAACCTCAGTATTTCAAA  250

seq1  TAAAATATAGCACACAGCTTTTGTTACTCTAAAGTCAAAATACAAGAGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATATAGCACACAGCTTTTGTTACTCTAAAGTCAAAATACAAGAGAA  300

seq1  GCGCTCGAGGCGAGGATCCTTCATGAACGTGGAGGTTTTTTTGGGATTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGCTCGAGGCGAGGATCCTTCATGAACGTGGAGGTTTTTTTGGGATTCA  350

seq1  GACCCAGGCAAGAGGTTAAGGGGCCTGTTTAACAGACTAACGCAGACCTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCCAGGCAAGAGGTTAAGGGGCCTGTTTAACAGACTAACGCAGACCTG  400

seq1  GCCTCCAGGTTCTCCCATGATCCCTCGGTCCCTACCAGTTACAGGTCATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCCAGGTTCTCCCATGATCCCTCGGTCCCTACCAGTTACAGGTCATA  450

seq1  CTCTGCCCTCTATGCTGAACTTTCCAGTTTAGGCCAGAGGCTGGGCTTTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGCCCTCTATGCTGAACTTTCCAGTTTAGGCCAGAGGCTGGGCTTTC  500

seq1  TCTCAACCAGAGGCTGTTCACTATGATCTGGATATTTTGGTCCTCCCTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAACCAGAGGCTGTTCACTATGATCTGGATATTTTGGTCCTCCCTCT  550

seq1  ATCCCTCCCCACCCCCCCACCCTGCTTCACCCCACACACATGCTTGCTTT  600
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  ATCCCTCCCCACCACCCCACCCTGCTTCACCCCACACACATGCTTGCTTT  600

seq1  TCCTTCCTTCGCTCCCTCCCTCCTTCCTAACTTCCCTCCATCTGCCTGTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTCCTTCGCTCCCTCCCTCCTTCCTAACTTCCCTCCATCTGCCTGTC  650

seq1  TTTTCTCTCTCAATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTCTCTCAATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT  700

seq1  CTC  703
      |||
seq2  CTC  703