BAC Information

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BAC

Clone NameB6Ng01-126G02
Chromosome10 (Build37)
Map Location 61,541,114 - 61,674,444
singlet/doubletdoublet
Overlap gene2010107G23Rik, Neurog3, Tspan15
Upstream genePcbd1, Sgpl1, 1700021K02Rik, Adamts14, Prf1, EG237361, X99384, Nodal, Eif4ebp2, D830039M14Rik, Lrrc20, Npffr1, Ppa1, Sar1a, Tysnd1, Aifm2, H2afy2, LOC100039284, Col13a1, EG436164, EG432466
Downstream geneTacr2, Hk1, 2210417K05Rik, Hkdc1, Supv3l1, Vps26a, Srgn, 2510003E04Rik, Ddx21, Ddx50, Stox1, Ccar1, Cxxc6, Slc25a16, Dna2l, Rufy2, Hnrph3, 3110049J23Rik, Pbld, Atoh7, Mypn
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-126G02.bB6Ng01-126G02.g
ACCDH928765DH928766
length1,129116
definitionDH928765|Mus musculus domesticus DNA, BAC clone: B6Ng01-126G02, 5' end.DH928766|Mus musculus domesticus DNA, BAC clone: B6Ng01-126G02, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(61,541,114 - 61,542,251)(61,674,329 - 61,674,444)
sequence
gaattcatttcagactttaactttcccacggcttccacaatttggctatg
cttctcacataggatatgtctggcctttactgcactgccaccaccctggg
gccccaagtctttgtgtcagcacagtcactctgggaggctgcaccccctt
tctccttactcccccttttccagaattcgattagaaaaccattgtccccc
tcaaaggcatcacctaaacttgctgccacaccctcagcaggaatggtgtc
cttacaaggagcatggaacaggttcagaagactgttttagtttgcagtga
tagttttcatccattttttggaagcagggtctcatgtagcccaggctgcc
tcagactctgtgtagtcaaggataaccttgaactcctgaccctcctgtct
ctatctcccaaagtctggggtcacaggtgagaaccattgtatcaatccat
tttaaacaatattatgtttttattaattctttaaaaattcatacaggtta
aatgaaagcctcagagaagaccttgccaacagaagggatcatgttggaag
cagggaggcaagaacagaaggcaagatagagagactggattgctcaataa
tgtcaatgaggaatttttgaaaaatatatgagtagaacatttgaataatg
gtcataaaagaagaaaatatcatggtggagacataaagaatatctttaat
aaaatcataaaggagaagaatttctaaacctagagaaagagatgcccatc
caggtataagaaacctacagaatagcaaatgtacatgaccaaaaaataac
tccctatgtcataatacagttaaaatactaaaaagacagaaggaagagag
agattggaagctgcaaaagagaatgctcaagtcacatatatatacaggct
cattagaataacatctgaatattcaatagaaacatttaaagtctaggaat
ggcctaggaaaatgtattcctgatactgaaagactgtgagtgccaaaaca
aaaacaaaacccagactatatacccagcaaactatctataaaatcaagtg
ggggggctgggaagtgggcctcagtgataggagcacttgccacctcattc
gagactaagtttggttctagcacttacat
cctattctctcctaccatcagtacaactctgtccctgcatctgagtgctc
ctgcagtggcctgagtcggggattttcgatccccagggtcagatgtacgg
gggtgggggtgggggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_61541114_61542251
seq2: B6Ng01-126G02.b_49_1177

seq1  GAATTCATTTCAGACTTTAACTTTCCCACGGCTTCCACAATTTGGCTATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTTCAGACTTTAACTTTCCCACGGCTTCCACAATTTGGCTATG  50

seq1  CTTCTCACATAGGATATGTCTGGCCTTTACTGCACTGCCACCACCCTGGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTCACATAGGATATGTCTGGCCTTTACTGCACTGCCACCACCCTGGG  100

seq1  GCCCCAAGTCTTTGTGTCAGCACAGTCACTCTGGGAGGCTGCACCCCCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCCAAGTCTTTGTGTCAGCACAGTCACTCTGGGAGGCTGCACCCCCTT  150

seq1  TCTCCTTACTCCCCCTTTTCCAGAATTCGATTAGAAAACCATTGTCCCCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCTTACTCCCCCTTTTCCAGAATTCGATTAGAAAACCATTGTCCCCC  200

seq1  TCAAAGGCATCACCTAAACTTGCTGCCACACCCTCAGCAGGAATGGTGTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAGGCATCACCTAAACTTGCTGCCACACCCTCAGCAGGAATGGTGTC  250

seq1  CTTACAAGGAGCATGGAACAGGTTCAGAAGACTGTTTTAGTTTGCAGTGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACAAGGAGCATGGAACAGGTTCAGAAGACTGTTTTAGTTTGCAGTGA  300

seq1  TAGTTTTCATCCATTTTTTGGAAGCAGGGTCTCATGTAGCCCAGGCTGCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTTTCATCCATTTTTTGGAAGCAGGGTCTCATGTAGCCCAGGCTGCC  350

seq1  TCAGACTCTGTGTAGTCAAGGATAACCTTGAACTCCTGACCCTCCTGTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGACTCTGTGTAGTCAAGGATAACCTTGAACTCCTGACCCTCCTGTCT  400

seq1  CTATCTCCCAAAGTCTGGGGTCACAGGTGAGAACCATTGTATCAATCCAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCTCCCAAAGTCTGGGGTCACAGGTGAGAACCATTGTATCAATCCAT  450

seq1  TTTAAACAATATTATGTTTTTATTAATTCTTTAAAAATTCATACAGGTTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAACAATATTATGTTTTTATTAATTCTTTAAAAATTCATACAGGTTA  500

seq1  AATGAAAGCCTCAGAGAAGACCTTGCCAACAGAAGGGATCATGTTGGAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAAAGCCTCAGAGAAGACCTTGCCAACAGAAGGGATCATGTTGGAAG  550

seq1  CAGGGAGGCAAGAACAGAAGGCAAGATAGAGAGACTGGATTGCTCAATAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGAGGCAAGAACAGAAGGCAAGATAGAGAGACTGGATTGCTCAATAA  600

seq1  TGTCAATGAGGAATTTTTGAAAAATATATGAGTAGAACATTTGAATAATG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCAATGAGGAATTTTTGAAAAATATATGAGTAGAACATTTGAATAATG  650

seq1  GTCATAAAAGAAGAAAATATCATGGTGGAGACATAAAGAATATCTTTAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATAAAAGAAGAAAATATCATGGTGGAGACATAAAGAATATCTTTAAT  700

seq1  AAAATCATAAAGGAGAAGAATTTCTAAACCTAGAGAAAGAGATGCCCATC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATCATAAAGGAGAAGAATTTCTAAACCTAGAGAAAGAGATGCCCATC  750

seq1  CAGGTATAAGAAACCTACAGAATAGCAAATGTACATGACCAAAAAATAAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTATAAGAAACCTACAGAATAGCAAATGTACATGACCAAAAAATAAC  800

seq1  TCCCTATGTCATAATACAGTTAAAATACTAAAAAGACAGAAGGAAGAGAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTATGTCATAATACAGTTAAAATACTAAAAAGACAGAAGGAAGAGAG  850

seq1  AGATTGGAAGCTGCAAAAGAGAATGCTCAAGTCACATATATATACAGGCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTGGAAGCTGCAAAAGAGAATGCTCAAGTCACATATATATACAGGCT  900

seq1  CATTAGAATAACATCTGAATATTCAATAGAAACATTTAAAGTCTAGGAAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTAGAATAACATCTGAATATTCAATAGAAACATTTAAAGTCTAGGAAT  950

seq1  GGCCTAGGAAAATGTATTCCTGATACTGAAAGACTGTGAGTGCCAAAAAC  1000
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  GGCCTAGGAAAATGTATTCCTGATACTGAAAGACTGTGAGTGCC-AAAAC  999

seq1  AAAAACAAAAACCCAGACTATTATACCCAGCAAAACTATCTATTAAAATC  1050
      |||||| ||||||||||||| |||||||||| |||||||||| |||||||
seq2  AAAAAC-AAAACCCAGACTA-TATACCCAGC-AAACTATCTA-TAAAATC  1045

seq1  AAAGGTGGGGGGCTGGGAAGTGGG-CTCAGTGATTAAGAGCACTTGCCA-  1098
       |||  |||||||||||||||||| |||||||| || |||||||||||| 
seq2  -AAGTGGGGGGGCTGGGAAGTGGGCCTCAGTGA-TAGGAGCACTTGCCAC  1093

seq1  CTCATTCAGAGGACCTAGGTTTGGTTCCTAGCACTTACAT  1138
      ||||||| |||   ||| |||||||| |||||||||||||
seq2  CTCATTC-GAG--ACTAAGTTTGGTT-CTAGCACTTACAT  1129

seq1: chr10_61674329_61674444
seq2: B6Ng01-126G02.g_73_188 (reverse)

seq1  CCCCCCACCCCCACCCCCGTACATCTGACCCTGGGGATCGAAAATCCCCG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCCACCCCCACCCCCGTACATCTGACCCTGGGGATCGAAAATCCCCG  50

seq1  ACTCAGGCCACTGCAGGAGCACTCAGATGCAGGGACAGAGTTGTACTGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAGGCCACTGCAGGAGCACTCAGATGCAGGGACAGAGTTGTACTGAT  100

seq1  GGTAGGAGAGAATAGG  116
      ||||||||||||||||
seq2  GGTAGGAGAGAATAGG  116