BAC Information

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BAC

Clone NameB6Ng01-127A07
Chromosome10 (Build37)
Map Location 100,453,007 - 100,559,514
singlet/doubletdoublet
Overlap genenone
Upstream geneKitl, LOC100043208, LOC100043211, EG667532, LOC670007, LOC235966, LOC667556, LOC100043224, LOC100043227, LOC100043231, LOC100043235, LOC667580, LOC100043239, LOC100043242, LOC100043244, LOC667607, LOC100043247, EG213051, Tmtc3, 4930430F08Rik, 1700017N19Rik
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-127A07.bB6Ng01-127A07.g
ACCDH929244DH929245
length1,139883
definitionDH929244|Mus musculus domesticus DNA, BAC clone: B6Ng01-127A07, 5' end.DH929245|Mus musculus domesticus DNA, BAC clone: B6Ng01-127A07, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(100,558,342 - 100,559,514)(100,453,007 - 100,453,875)
sequence
gaattccatacatgtacatacacatttccatccacatatttccttgtcaa
cctgtcctaaattctccaaacaaggccctcttagaaatacaggttttcct
ttttctgtattttaaaaaatttctcaaactacacttttaaataggaattg
tattctagtttgtcttttcttgcttcattgatctacacttctataatttt
ataactacttataaacatgttgcaaatcataggctcttcatcaccatcta
ggtgttagattgaaattacctaatactcttaatttaattgcttatgtttt
tattaattttattttaaaagtaacttaaagtaaccaaagatccatccagc
taagtaattccaacgtaaccttgtaattaaccatctggctactattgaag
tcttctggctcctaatttttttttaattgatgttcaacaaaccagcaccc
aatcttggcttcaaattcttcctctatgatcttctccacttaaccatctt
tttaccactgaaggttctctgcaaatatttagtaatgttgtgaattattt
tcaaactttagtctatcttttcctcctccttctcctcctaattttttcct
tcctttttgtttgttgttcattttgcattcttccccttatttcatttttt
aaaataatgaaaaattccatttattcaagaaattagcataaaaaagctta
catgctttgtttgctaatttaatttaaccataaatcttttgtttattaag
aaaaatatttcatatacaaacaccatgtacaaaaatctttatttgcaaaa
cagatcacacccaaagtgttagaacaaaatgttcccagttgattcactta
gctataccatggcataatgggttaattctctgctgtaaataggatttgaa
atccaagttttccatatctaaatcatggacattttcctgattaaattttc
catagcactctattttgggtaatttcattcatcgtttgtttgttgttatc
attattttgtttttgttttgctgttgtttgttttctgagacaggttctcc
ataatagcctgctgtctgattcacttgcgaacagctgccacaaaccaaaa
atctgctgctctgcccaatgcatggattaaagcatgagc
gaattcactatcatcctgatatatatagcaagttctaggccagtaggaat
ttagaggacctcagaaacacaccacaccacacagacacaaacaaagacac
acacacacacacaaacacacacacacacaaacacacacacacacagagaa
acatagaaatatacacaccacaaacatgctcacacatacacagacacaca
ccacaataatgctcacacatacaacacacacagacagcacacacactcac
acacacaccatacacaaaagaatgtgcataagcacccattcaaatacact
cacacagaaacacatacatacaacacacatataaatacacacacacacac
atacccataaaacaaagagaaacaagcatacacatgtgcacaccccacca
catacatgtcacacaaactataccaacatgtacatgggtgctggtgatat
actgatggaattaatataataactgagtcttttaatcacttagacattgt
tttcaaaggccaagttatactctgattctagcactcagggggcagacaca
ggtggatctctgagttcaaggctagcctgttctgtagagtgagtttcaag
gacagcaaaacatacactcacacacacacacacacacacacacaaagtca
cactaaagcaataacagccaaaagaagaaggaggaggaggaagaagaaag
acttttgaaataagcattattttatggtggggattgtttgccaaacaaaa
ggaagctgttcatggaaaaaatgagaagttcctaagatgcctcacttatc
ctttaatttgcttgctcctccgtcaatcacctattgggatcacttcctcc
tttactctcccccaattggggcttgccgcccaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_100558342_100559514
seq2: B6Ng01-127A07.b_47_1185 (reverse)

seq1  GCTCATGCCTTTAATCCATGCACTTGGGGGGCAGAGGCAGGCAGATTTTT  50
      ||||||| |||||||||||||| |    ||||||| ||| ||||||||||
seq2  GCTCATG-CTTTAATCCATGCATT----GGGCAGA-GCA-GCAGATTTTT  43

seq1  GTGTTTGTGGCCAGCCTGGTCTGCAAAGTGAATTCCAGGACAGCCAGGGC  100
      | |||||||| ||| ||| || || ||||||||  || ||||||   |||
seq2  G-GTTTGTGG-CAG-CTGTTC-GC-AAGTGAAT--CA-GACAGC--AGGC  83

seq1  TA-TATGGAGAAACCCTGTCTCAAGAAAAAACAAAAACAAACA--AGCAA  147
      || |||||||||  |||||||||          ||||||||||  |||||
seq2  TATTATGGAGAA--CCTGTCTCA---------GAAAACAAACAACAGCAA  122

seq1  AAACAAAAAACAAAAATAAATGAATAAACAAACAAACAAACGAATGAATG  197
      ||   ||||||||||   |||| ||||   |||||||||||| |||||||
seq2  AA--CAAAAACAAAA--TAATG-ATAA--CAACAAACAAACG-ATGAATG  164

seq1  AAAATTACCCAAAATAGAGTGCTATGGAAAATTTAATCAGGAAAATGTCC  247
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  -AAATTACCCAAAATAGAGTGCTATGGAAAATTTAATCAGGAAAATGTCC  213

seq1  ATGATTTAGATATGGAAAACTTGGATTTCAAATCCTATTTACAGCAGAGA  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATTTAGATATGGAAAACTTGGATTTCAAATCCTATTTACAGCAGAGA  263

seq1  ATTAACCCATTATGCCATGGTATAGCTAAGTGAATCAACTGGGAACATTT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAACCCATTATGCCATGGTATAGCTAAGTGAATCAACTGGGAACATTT  313

seq1  TGTTCTAACACCTTGGGTGTGATCTGTTTTGCAAATAAAGATTTTTGTAC  397
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  TGTTCTAACACTTTGGGTGTGATCTGTTTTGCAAATAAAGATTTTTGTAC  363

seq1  ATGGTGTTTGTATATGAAATATTTTTCTTAATAAACAAAAGATTTATGGT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTGTTTGTATATGAAATATTTTTCTTAATAAACAAAAGATTTATGGT  413

seq1  TAAATTAAATTAGCAAACAAAGCATGTAAGCTTTTTTATGCTAATTTCTT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTAAATTAGCAAACAAAGCATGTAAGCTTTTTTATGCTAATTTCTT  463

seq1  GAATAAATGGAATTTTTCATTATTTTAAAAAATGAAATAAGGGGAAGAAT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATAAATGGAATTTTTCATTATTTTAAAAAATGAAATAAGGGGAAGAAT  513

seq1  GCAAAATGAACAACAAACAAAAAGGAAGGAAAAAATTAGGAGGAGAAGGA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAATGAACAACAAACAAAAAGGAAGGAAAAAATTAGGAGGAGAAGGA  563

seq1  GGAGGAAAAGATAGACTAAAGTTTGAAAATAATTCACAACATTACTAAAT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGAAAAGATAGACTAAAGTTTGAAAATAATTCACAACATTACTAAAT  613

seq1  ATTTGCAGAGAACCTTCAGTGGTAAAAAGATGGTTAAGTGGAGAAGATCA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGCAGAGAACCTTCAGTGGTAAAAAGATGGTTAAGTGGAGAAGATCA  663

seq1  TAGAGGAAGAATTTGAAGCCAAGATTGGGTGCTGGTTTGTTGAACATCAA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGGAAGAATTTGAAGCCAAGATTGGGTGCTGGTTTGTTGAACATCAA  713

seq1  TTAAAAAAAAATTAGGAGCCAGAAGACTTCAATAGTAGCCAGATGGTTAA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAAAAAAATTAGGAGCCAGAAGACTTCAATAGTAGCCAGATGGTTAA  763

seq1  TTACAAGGTTACGTTGGAATTACTTAGCTGGATGGATCTTTGGTTACTTT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAAGGTTACGTTGGAATTACTTAGCTGGATGGATCTTTGGTTACTTT  813

seq1  AAGTTACTTTTAAAATAAAATTAATAAAAACATAAGCAATTAAATTAAGA  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTACTTTTAAAATAAAATTAATAAAAACATAAGCAATTAAATTAAGA  863

seq1  GTATTAGGTAATTTCAATCTAACACCTAGATGGTGATGAAGAGCCTATGA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTAGGTAATTTCAATCTAACACCTAGATGGTGATGAAGAGCCTATGA  913

seq1  TTTGCAACATGTTTATAAGTAGTTATAAAATTATAGAAGTGTAGATCAAT  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCAACATGTTTATAAGTAGTTATAAAATTATAGAAGTGTAGATCAAT  963

seq1  GAAGCAAGAAAAGACAAACTAGAATACAATTCCTATTTAAAAGTGTAGTT  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCAAGAAAAGACAAACTAGAATACAATTCCTATTTAAAAGTGTAGTT  1013

seq1  TGAGAAATTTTTTAAAATACAGAAAAAGGAAAACCTGTATTTCTAAGAGG  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAAATTTTTTAAAATACAGAAAAAGGAAAACCTGTATTTCTAAGAGG  1063

seq1  GCCTTGTTTGGAGAATTTAGGACAGGTTGACAAGGAAATATGTGGATGGA  1147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTGTTTGGAGAATTTAGGACAGGTTGACAAGGAAATATGTGGATGGA  1113

seq1  AATGTGTATGTACATGTATGGAATTC  1173
      ||||||||||||||||||||||||||
seq2  AATGTGTATGTACATGTATGGAATTC  1139

seq1: chr10_100453007_100453875
seq2: B6Ng01-127A07.g_71_934

seq1  GAATTCACTATCATCCTGATATATATAGCAAGTTCTAGGCCAGTAGGAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTATCATCCTGATATATATAGCAAGTTCTAGGCCAGTAGGAAT  50

seq1  TTAGAGGACCTCAGAAACACACCACACCACACAGACACAAACAAAGACAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAGGACCTCAGAAACACACCACACCACACAGACACAAACAAAGACAC  100

seq1  ACACACACACACAAACACACACACACACAAACACACACACACACAGAGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACAAACACACACACACACAAACACACACACACACAGAGAA  150

seq1  ACATAGAAATATACACACCACAAACATGCTCACACATACACAGACACACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAGAAATATACACACCACAAACATGCTCACACATACACAGACACACA  200

seq1  CCACAATAATGCTCACACATACAACACACACAGACAGCACACACACTCAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAATAATGCTCACACATACAACACACACAGACAGCACACACACTCAC  250

seq1  ACACACACCATACACAAAAGAATGTGCATAAGCACCCATTCAAATACACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACCATACACAAAAGAATGTGCATAAGCACCCATTCAAATACACT  300

seq1  CACACAGAAACACATACATACAACACACATATAAATACACACACACACAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACAGAAACACATACATACAACACACATATAAATACACACACACACAC  350

seq1  ATACCCATAAAACAAAGAGAAACAAGCATACACATGTGCACACCCCACCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCCATAAAACAAAGAGAAACAAGCATACACATGTGCACACCCCACCA  400

seq1  CATACATGTCACACAAACTATACCAACATGTACATGGGTGCTGGTGATAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACATGTCACACAAACTATACCAACATGTACATGGGTGCTGGTGATAT  450

seq1  ACTGATGGAATTAATATAATAACTGAGTCTTTTAATCACTTAGACATTG-  499
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  ACTGATGGAATTAATATAATAACTGAGTCTTTTAATCACTTAGACATTGT  500

seq1  TTTCAAAGGCCAAGTTATACTCTGATTCTAGCACTCAGGGGGCAGACACA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAAAGGCCAAGTTATACTCTGATTCTAGCACTCAGGGGGCAGACACA  550

seq1  GGTGGATCTCTGAGTTCAAGGCTAGCCTGTTCTGTAGAGTGAGTTTC-AG  598
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  GGTGGATCTCTGAGTTCAAGGCTAGCCTGTTCTGTAGAGTGAGTTTCAAG  600

seq1  GACAGCAAAACATACACTCACACACACACACACACACACACACAAAGTCA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGCAAAACATACACTCACACACACACACACACACACACACAAAGTCA  650

seq1  CACTAAAGCAAATAACAGCAAAAAGAAGAAGGAGGAGGAGGAAGAAGAAA  698
      ||||||||| ||||||||| ||||||||||||||||||||||||||| ||
seq2  CACTAAAGC-AATAACAGCCAAAAGAAGAAGGAGGAGGAGGAAGAAG-AA  698

seq1  AGACATTTTGAAATAAGCATTATTTTAT-GTGGGAATTGTTTGCCAAAC-  746
      |||| ||||||||||||||||||||||| ||||| |||||||||||||| 
seq2  AGAC-TTTTGAAATAAGCATTATTTTATGGTGGGGATTGTTTGCCAAACA  747

seq1  AAAGGAAGCTGTTCAATGAAAAAAATGAGAAGTTCCTAAGATGCCTTCAC  796
      |||||||||||||| ||| |||||||||||||||||||||||||| ||||
seq2  AAAGGAAGCTGTTC-ATGGAAAAAATGAGAAGTTCCTAAGATGCC-TCAC  795

seq1  TTATCTTTTATTTTGCTTTGCTCCTTCCGTCAATCACTTATTTGGATTCA  846
      ||||| |||| ||||| ||||||| |||||||||||| |||| ||| |||
seq2  TTATCCTTTAATTTGC-TTGCTCC-TCCGTCAATCACCTATTGGGA-TCA  842

seq1  CTTCTTCCTTTACCTCTCCCCCA  869
      |||| ||||||| ||||||||||
seq2  CTTCCTCCTTTA-CTCTCCCCCA  864