BAC Information

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BAC

Clone NameB6Ng01-127P01
Chromosome10 (Build37)
Map Location 104,054,091 - 104,054,480
singlet/doubletsinglet
Overlap genenone
Upstream geneEG627488, EG667692, EG667695, LOC100043292
Downstream geneLOC100042383, Tmtc2, EG627573
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-127P01.bB6Ng01-127P01.g
ACCDH929923DH929924
length993883
definitionDH929923|Mus musculus domesticus DNA, BAC clone: B6Ng01-127P01, 5' end.DH929924|Mus musculus domesticus DNA, BAC clone: B6Ng01-127P01, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatgtctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatccgtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatatatatatatatatgtatagccagaagcttatt
tatatagccagaagctggaaagaacccagatgcccctcaacagaggaatg
gatacagaaaatgtggtacatctacacaatggagtactactcagctatta
aaaagaatgaatttatgaaattcctagccaaatggatggacctggagggc
atcatcctgagtgaggtaacacattcacaaaggaactcacacaatatgta
ctcactgataagtggatattagcccaaaacttaggatacccaagatatag
atacaatttcctaaacacatgaaactcaagaaaatgatgactgaagtgtg
gacactatgcccctccttaaaagtgggaacaaaacactcttggaaggagt
tacagagacaaagtttggagctgagatgaaaggatggaccatgtagagac
tgccttatcaggatccacccatatcagcatccaaacgctgatacattgca
acctagcagtttatcgaaggctcgatgtacttgctcttggagatatccgg
gcctacaaccgaatgatgccctgcgtcatgtggatcacggtccatggaga
gctaaagtccaggacaagatcccaccttagggatcacttgaac
gaattccacataaaaccagagacactgaaacttatagaggagaaagtggg
gaagagcctcaaagatatgggcacagggggaaaattcctgaacagaacac
caatggcttgtgctgtaagatcaaaaattgacaaatgggacctcaaaaaa
gttgcaaagcttctgtaaggcaaaggacactgtcaataagacaaaaagtc
aaccaacagattgggaaaagatcttaccaatcctaaatctgataggggtt
aatatccaatatatacaaagcactcaagaagttagactttagaaaaccaa
ataaccttattttaaaatggggtgcagagctaaataaagaattctcaatc
gaggaatactgaatggctcaggagcacctaaaaaaaaaaaaaaaaaaaag
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tacacctcacatcagtcaaaatgactaagatcattaagaattatttacct
atcctaaatcagataggggactaatatccaacatatataaagaactcaag
aaggtggacctcagaaaatcaaataacccccttaaaaaatggggctcaga
actgaacaaagaatttttcacctgaggaataccgaatggcagagaagcac
ctgaaaaaatgttcaacatcctttaatcatcagggaaatgcaaatcaaac
caccctgagattccacctcacaccagtgagaatggctaagatcaaaattc
agtgacagcaaatgctggcgaggatgtgaaaaagaggaacactcctccat
tgttggtgggattgcaggcttgtacaaccactctgggatatcagtctggc
ggttccttcagaaaattggacatattactaccg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_104054091_104054480
seq2: B6Ng01-127P01.g_562_951 (reverse)

seq1  CGGTAGTACTATGTCCAATTTTCTG-ACGAACCGCCAGACGGAT-TTCCA  48
      |||||||| |||||||||||||||| | |||||||||||| ||| | |||
seq2  CGGTAGTAATATGTCCAATTTTCTGAAGGAACCGCCAGACTGATATCCCA  50

seq1  GAGTGGTTGTACAAGCCTGCAATCCCACCAACAATGGAGGAGTGTTCCTC  98
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGGTTGTACAAGCCTGCAATCCCACCAACAATGGAGGAGTGTTCCTC  100

seq1  TTTCTCCACATCCTCGCCAGCATCTGCTGTCACCTGAATTTTTGATCTTA  148
      ||| | ||||||||||||||||| |||||||| ||||| |||||||||||
seq2  TTT-TTCACATCCTCGCCAGCATTTGCTGTCA-CTGAA-TTTTGATCTTA  147

seq1  GCCATTCTGACTGGTGTGAGGTGGAATCTCAGGGTTGTTTTGATTTGCAT  198
      |||||||| ||||||||||||||||||||||||| || ||||||||||||
seq2  GCCATTCTCACTGGTGTGAGGTGGAATCTCAGGG-TGGTTTGATTTGCAT  196

seq1  TTCCCTGATGATT-AAGGATGTTGAACATTTTTTCAGGTGCTTCTCTGCC  247
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  TTCCCTGATGATTAAAGGATGTTGAACATTTTTTCAGGTGCTTCTCTGCC  246

seq1  ATTCGGTATTCCTCAGGTG-AGAATTCTTTGTTCAGTTCTGAGCCCCATT  296
      ||||||||||||||||||| | ||||||||||||||||||||||||||||
seq2  ATTCGGTATTCCTCAGGTGAAAAATTCTTTGTTCAGTTCTGAGCCCCATT  296

seq1  TTTTAATAGGGTTATTTGATTTTCTGAAGTCCACCTTCTTGAGTTCTTTA  346
      ||||||  ||||||||||||||||||| ||||||||||||||||||||||
seq2  TTTTAAGGGGGTTATTTGATTTTCTGAGGTCCACCTTCTTGAGTTCTTTA  346

seq1  TATATGTTGGATATTAGTCCCCTATCTGAATTAGGATAGGTAAA  390
      ||||||||||||||||||||||||||||| ||||||||||||||
seq2  TATATGTTGGATATTAGTCCCCTATCTGATTTAGGATAGGTAAA  390