BAC Information

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BAC

Clone NameB6Ng01-128A20
Chromosome10 (Build37)
Map Location 53,085,484 - 53,205,834
singlet/doubletdoublet
Overlap geneEG432460
Upstream geneGopc, EG668294, Nepn, D10Ertd438e, EG629689, Zfa, Slc35f1, Pln
Downstream geneMcm9, Asf1a, LOC100042554, 4930589M24Rik, Man1a
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-128A20.bB6Ng01-128A20.g
ACCDH930005DH930006
length26371
definitionDH930005|Mus musculus domesticus DNA, BAC clone: B6Ng01-128A20, 5' end.DH930006|Mus musculus domesticus DNA, BAC clone: B6Ng01-128A20, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(53,205,572 - 53,205,834)(53,085,484 - 53,085,554)
sequence
gaattccatataaacatacatgtcgtaaaacctttcttaaccagcactag
ggaatgcgtgagagggcagtgggggcagaagttgaatatgcacacactaa
aaccacacttgtgtatagagacccacagtaaaacccagtactttgtatgc
taacttattgtatgctttgtgatgccatccctgtccctggtcacatgtca
agtttttagagagtgaggaagaaaagaaaggggaggagaggagagaagag
gaggggaaggaga
aatggactacttttaaaaagaaaaaataggaccaaaggccagttgggagg
aaagtaagagagtgtgtgtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_53205572_53205834
seq2: B6Ng01-128A20.b_31_293 (reverse)

seq1  TCTCCTTCCCCTCCTCTTCTCTCCTCTCCTCCCCTTTCTTTTCTTCCTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCTTCCCCTCCTCTTCTCTCCTCTCCTCCCCTTTCTTTTCTTCCTCA  50

seq1  CTCTCTAAAAACTTGACATGTGACCAGGGACAGGGATGGCATCACAAAGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTAAAAACTTGACATGTGACCAGGGACAGGGATGGCATCACAAAGC  100

seq1  ATACAATAAGTTAGCATACAAAGTACTGGGTTTTACTGTGGGTCTCTATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAATAAGTTAGCATACAAAGTACTGGGTTTTACTGTGGGTCTCTATA  150

seq1  CACAAGTGTGGTTTTAGTGTGTGCATATTCAACTTCTGCCCCCACTGCCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAGTGTGGTTTTAGTGTGTGCATATTCAACTTCTGCCCCCACTGCCC  200

seq1  TCTCACGCATTCCCTAGTGCTGGTTAAGAAAGGTTTTACGACATGTATGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCACGCATTCCCTAGTGCTGGTTAAGAAAGGTTTTACGACATGTATGT  250

seq1  TTATATGGAATTC  263
      |||||||||||||
seq2  TTATATGGAATTC  263

seq1: chr10_53085484_53085554
seq2: B6Ng01-128A20.g_73_143

seq1  AATGGACTACTTTTAAAAAGAAAAAATAGGACCAAAGGCCAGTTGGGAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGACTACTTTTAAAAAGAAAAAATAGGACCAAAGGCCAGTTGGGAGG  50

seq1  AAAGTAAGAGAGTGTGTGTGT  71
      |||||||||||||||||||||
seq2  AAAGTAAGAGAGTGTGTGTGT  71