BAC Information

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BAC

Clone NameB6Ng01-128J12
Chromosome10 (Build37)
Map Location 101,167,261 - 101,357,162
singlet/doubletdoublet
Overlap genenone
Upstream genenone
Downstream geneMgat4c, LOC667652, Nts, Pamci, LOC382413
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-128J12.bB6Ng01-128J12.g
ACCDH930403DH930404
length130933
definitionDH930403|Mus musculus domesticus DNA, BAC clone: B6Ng01-128J12, 5' end.DH930404|Mus musculus domesticus DNA, BAC clone: B6Ng01-128J12, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(101,167,261 - 101,167,390)(101,356,220 - 101,357,162)
sequence
ctcttctatgtgttccttgttccaataattgttccaaatgagaattttag
tgtcaataaatttgagaattttacatggctcttattattccattgtggga
aagggaaagggaaggggaggaggaggggga
gaattccaagtccaggaagcaggagtgggtgggttggagaactgtgggag
cagggaggggataggggattcacagaggggaaaccaggaaaagggataac
attggaaatgtaaatgaagaaaatatctaataaataattacatgaaaact
tttcattgaataaaaaaagagacgaaagctatgctcattacattgctgta
ctcacacaaagcttaggagcagtctgaagatgcatggtcttagattgtgg
cattacacatggaggctgtaagataactgtggagagccttgccgcgagca
atcgccattataagatggcgctggcttccactgtgcctaactagtaaaca
agctttatgcacaagtgcaagagtgaactcacgcctagtcactgcccatc
ttgcggcttagtaatggggtgatgggcgagcaacgaatcaggagctgtca
cgccacatcaggtgctgaaacgtcacgctgcaggctatataagcagcgcc
attttcccggttcggggtcttcctttcctgataagtaagcaataaaagct
ttgccgcagaagattcccgttgtcctgagtgtgctcttgccggcggggac
aaaagctcgggatagataacttctttagaataggtcctccctgtagcctg
ttcctactgccacctcacttacatcttaaatgcttctgctttaaagtgta
aacagtatgaataaaatcagatgagcactttttaatagtttctgtactga
ttctataccagtatcatggatctccctgaagcacgttgctctggatttac
acagctgtatcagagtgttaaaaattatatgccagtcaatatgttcggtc
attgactaattggcctttacaaaccaattacctttacaggccattttatc
attaaaatcctattatttcccttttcccccctt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_101167261_101167390
seq2: B6Ng01-128J12.b_54_183

seq1  CTCTTCTATGTGTTCCTTGTTCCAATAATTGTTCCAAATGAGAATTTTAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTCTATGTGTTCCTTGTTCCAATAATTGTTCCAAATGAGAATTTTAG  50

seq1  TGTCAATAAATTTGAGAATTTTACATGGCTCTTATTATTCCATTGTGGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCAATAAATTTGAGAATTTTACATGGCTCTTATTATTCCATTGTGGGA  100

seq1  AAGGGAAAGGGAAGGGGAGGAGGAGGGGGA  130
      ||||||||||||||||||||||||||||||
seq2  AAGGGAAAGGGAAGGGGAGGAGGAGGGGGA  130

seq1: chr10_101356220_101357162
seq2: B6Ng01-128J12.g_69_1000 (reverse)

seq1  AGGGGGGAGAAGGGGAAATAAATAGGAATTATTAATTGATAAAATTGGCA  50
      |||||||| || ||||||| |||||||  | |||| |||||||| |||| 
seq2  AGGGGGGA-AAAGGGAAAT-AATAGGA--TTTTAA-TGATAAAA-TGGCC  44

seq1  TGTAAAGGTAAATTGGTTTGTAAAGGGCAATTTAGTCAAATGACCAGAAC  100
      ||||||||| |||||||||||||||| ||| |||||| ||||||| ||||
seq2  TGTAAAGGT-AATTGGTTTGTAAAGGCCAA-TTAGTC-AATGACC-GAAC  90

seq1  ATATTGAACTGGCATATAATTTTTAACACTCTGCTACAGCTGTGTAAATT  150
      |||||| |||||||||||||||||||||||||| |||||||||||||| |
seq2  ATATTG-ACTGGCATATAATTTTTAACACTCTGATACAGCTGTGTAAA-T  138

seq1  CCAGAGCAACGTGCTTCAGGGAGATCCATGATACTGGTATAGAAATCAGT  200
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  CCAGAGCAACGTGCTTCAGGGAGATCCATGATACTGGTATAG-AATCAGT  187

seq1  ACAGAAACTATTAAAAAGTGCTCATCTGATTTTATTCATACTGTTTACAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAAACTATTAAAAAGTGCTCATCTGATTTTATTCATACTGTTTACAC  237

seq1  TTTTAAGCAGAAGCATTTAAGATGTAAGTGAGGTGGCAGTAGGAACAGGC  300
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAGCAGAAGCATTTAAGATGTAAGTGAGGTGGCAGTAGGAACAGGC  287

seq1  TACAGGGAGGACCTATTCT-AAGAAGTTATCTATCCCGAGCTTTTGTCCC  349
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  TACAGGGAGGACCTATTCTAAAGAAGTTATCTATCCCGAGCTTTTGTCCC  337

seq1  CGCCGGCAAGAGCACACTCAGGACAACGGGAATCTTCTGCGGCAAAGCTT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCCGGCAAGAGCACACTCAGGACAACGGGAATCTTCTGCGGCAAAGCTT  387

seq1  TTATTGCTTACTTATCAGG-AAGGAAGACCCCGAACCGGGAAAATGGCGC  448
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  TTATTGCTTACTTATCAGGAAAGGAAGACCCCGAACCGGGAAAATGGCGC  437

seq1  TGCTTATATAGCCTGCAGCGTGACGTTTCAGCACCTGATGTGGCGTGACA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTATATAGCCTGCAGCGTGACGTTTCAGCACCTGATGTGGCGTGACA  487

seq1  GCTCCTGATTCGTTGCTCGCCCATCACCCCATTACTAAGCCGCAAGATGG  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCTGATTCGTTGCTCGCCCATCACCCCATTACTAAGCCGCAAGATGG  537

seq1  GCAGTGACTAGGCGTGAGTTCACTCTTGCACTTGTGCATAAAGCTTGTTT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTGACTAGGCGTGAGTTCACTCTTGCACTTGTGCATAAAGCTTGTTT  587

seq1  ACTAGTTAGGCACAGTGGAAGCCAGCGCCATCTTATAATGGCGATTGCTC  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGTTAGGCACAGTGGAAGCCAGCGCCATCTTATAATGGCGATTGCTC  637

seq1  GCGGCAAGGCTCTCCACAGTTATCTTACAGCCTCCATGTGTAATGCCACA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGGCAAGGCTCTCCACAGTTATCTTACAGCCTCCATGTGTAATGCCACA  687

seq1  ATCTAAGACCATGCATCTTCAGACTGCTCCTAAGCTTTGTGTGAGTACAG  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTAAGACCATGCATCTTCAGACTGCTCCTAAGCTTTGTGTGAGTACAG  737

seq1  CAATGTAATGAGCATAGCTTTCGTCTCTTTTTTTATTCAATGAAAAGTTT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGTAATGAGCATAGCTTTCGTCTCTTTTTTTATTCAATGAAAAGTTT  787

seq1  TCATGTAATTATTTATTAGATATTTTCTTCATTTACATTTCCAATGTTAT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGTAATTATTTATTAGATATTTTCTTCATTTACATTTCCAATGTTAT  837

seq1  CCCTTTTCCTGGTTTCCCCTCTGTGAATCCCCTATCCCCTCCCTGCTCCC  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTTTCCTGGTTTCCCCTCTGTGAATCCCCTATCCCCTCCCTGCTCCC  887

seq1  ACAGTTCTCCAACCCACCCACTCCTGCTTCCTGGACTTGGAATTC  943
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTTCTCCAACCCACCCACTCCTGCTTCCTGGACTTGGAATTC  932