BAC Information

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BAC

Clone NameB6Ng01-129E01
Chromosome10 (Build37)
Map Location 92,217,837 - 92,218,967
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100041799, LOC667203, LOC216229, LOC100041814, Nedd1
Downstream geneGm872, 4930485B16Rik, EG667314, Pctk2, Elk3, LOC100041854, Lta4h, Hal, Amdhd1, Ccdc38, Snrpf, LOC100041873, Ntn4, LOC667338
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-129E01.bB6Ng01-129E01.g
ACCDH930888DH930889
length1,1311,169
definitionDH930888|Mus musculus domesticus DNA, BAC clone: B6Ng01-129E01, 5' end.DH930889|Mus musculus domesticus DNA, BAC clone: B6Ng01-129E01, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttgtttgtactttctggcttctccctgttttctgttcccagtgg
agtcactccaccaactcctctgtggatctttactacgcccttctcctctt
ttaacattctgttcaggtttcattctattgtctacaaggttatgttgtat
attgtaaatgtatgtatccgttgcccttcatacattatgaacatccttcg
tgctggactgcagcatacagatctttgtctcttcagggccgggattgtgt
ccggtgtggagtagtgggaggaaaaaagtgtatgcctaaaaaaaagatac
gagagaaagaaagtctaaacactcatgcagacttatttttataagaacta
agctttaatttgcttggaaatttattcttttcaaaactggggagagtatt
aggaagccaagccgttgcagggaggaaaatagagcaggtgtgtaaactaa
ggccaagcagaagagatgtacagacctccaaataccagggaaggaagtag
ttaggctgcctccctggaaactaacacttgcgaagatgcacgggcacagc
tgaataataacagaaactcggagcagtgcctggagggtctagatgcatgt
ttggatggggcaagatctaagtccgatctggaatcttctctgctactgaa
ccataactgtgcctttctaccacagctcctagaactggcaggagcctctg
agaagcctctcagtctgatgtcagatttttggttgatttccattttattc
gtcccacggatggattaaaaaaggggcagaggaggctcagactgcatgct
cacttcactacaattgtcagaaacacaacaatgtagaagaagcacagccc
tatggtcttgatagttccatgggacagctccagagcctcttgcctgatgc
atgagattagaccatgggttctcaacttgggggccatgaccccctctggg
ggggtgttaaagaccctttcacaagggttgcatatcaaatatccatgttg
cattcataacatcatgtaaagggtctgtggattcacaagaatgatatcct
agactctaaatagtatgcaacagcaagaccattaatcagtcatgcagccc
tgcatgcaggggttcacatactttcagggtg
gaattctcacctgaggaataccgaatggcagagaagcacttgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccattcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaactggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacctagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtattcactgataagtggatattagccccaaacc
taggatacccaagatataagatataattttgctaaacacatgaaactcaa
gaagaatgaagactgaagtgtggacactatgcccctccttagatttggga
acaaaacacccatggaaggagtgacagagacggagtttgggagctgagat
gaaaggatggaccatgtagagactgccatatccagggatccaccccataa
tcagcatccaaaccgctgacaccattgcatacactagcaagattttattg
aaaggacgcagatgtagctgtctcttgtgagactatgccgggcccagcaa
acacagagtggatgctcacagtcagctatggatggatcatagggcttcta
tggaagagctgagaaaagtaccaaggagcctaaagggatctgcacctata
gtggaaacaacatatgagctacagtacccgactcttgacttgctgcttat
tatcaaaagaaggctattcggtcatcccgggaagagagggccatttggaa
cttgctaacttttatggcctagtacagggaactcatggctcaatcgcgat
gtgtggacggtagatggtc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_92217837_92218967
seq2: B6Ng01-129E01.b_45_1175

seq1  GAATTCTTGTTTGTACTTTCTGGCTTCTCCCTGTTTTCTGTTCCCAGTGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTGTTTGTACTTTCTGGCTTCTCCCTGTTTTCTGTTCCCAGTGG  50

seq1  AGTCACTCCACCAACTCCTCTGTGGATCTTTACTACGCCCTTCTCCTCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCACTCCACCAACTCCTCTGTGGATCTTTACTACGCCCTTCTCCTCTT  100

seq1  TTAACATTCTGTTCAGGTTTCATTCTATTGTCTACAAGGTTATGTTGTAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACATTCTGTTCAGGTTTCATTCTATTGTCTACAAGGTTATGTTGTAT  150

seq1  ATTGTAAATGTATGTATCCGTTGCCCTTCATACATTATGAACATCCTTCG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTAAATGTATGTATCCGTTGCCCTTCATACATTATGAACATCCTTCG  200

seq1  TGCTGGACTGCAGCATACAGATCTTTGTCTCTTCAGGGCCGGGATTGTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGGACTGCAGCATACAGATCTTTGTCTCTTCAGGGCCGGGATTGTGT  250

seq1  CCGGTGTGGAGTAGTGGGAGGAAAAAAGTGTATGCCTAAAAAAAAGATAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGGTGTGGAGTAGTGGGAGGAAAAAAGTGTATGCCTAAAAAAAAGATAC  300

seq1  GAGAGAAAGAAAGTCTAAACACTCATGCAGACTTATTTTTATAAGAACTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAAAGAAAGTCTAAACACTCATGCAGACTTATTTTTATAAGAACTA  350

seq1  AGCTTTAATTTGCTTGGAAATTTATTCTTTTCAAAACTGGGGAGAGTATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTTAATTTGCTTGGAAATTTATTCTTTTCAAAACTGGGGAGAGTATT  400

seq1  AGGAAGCCAAGCCGTTGCAGGGAGGAAAATAGAGCAGGTGTGTAAACTAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGCCAAGCCGTTGCAGGGAGGAAAATAGAGCAGGTGTGTAAACTAA  450

seq1  GGCCAAGCAGAAGAGATGTACAGACCTCCAAATACCAGGGAAGGAAGTAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCAAGCAGAAGAGATGTACAGACCTCCAAATACCAGGGAAGGAAGTAG  500

seq1  TTAGGCTGCCTCCCTGGAAACTAACACTTGCGAAGATGCACGGGCACAGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGCTGCCTCCCTGGAAACTAACACTTGCGAAGATGCACGGGCACAGC  550

seq1  TGAATAATAACAGAAACTCGGAGCAGTGCCTGGAGGGTCTAGATGCATGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATAATAACAGAAACTCGGAGCAGTGCCTGGAGGGTCTAGATGCATGT  600

seq1  TTGGATGGGGCAAGATCTAAGTCCGATCTGGAATCTTCTCTGCTACTGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGATGGGGCAAGATCTAAGTCCGATCTGGAATCTTCTCTGCTACTGAA  650

seq1  CCATAACTGTGCCTTTCTACCACAGCTCCTAGAACTGGCAGGAGCCTCTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATAACTGTGCCTTTCTACCACAGCTCCTAGAACTGGCAGGAGCCTCTG  700

seq1  AGAAGCCTCTCAGTCTGATGTCAGATTTTTGGTTGATTTCCATTTTATTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGCCTCTCAGTCTGATGTCAGATTTTTGGTTGATTTCCATTTTATTC  750

seq1  GTCCCACGGATGGATTAAAAAAGGGGCAGAGGAGGCTCAGACTGCATGCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCCACGGATGGATTAAAAAAGGGGCAGAGGAGGCTCAGACTGCATGCT  800

seq1  CACTTCACTACAATTGTCAGAAACACAACAATGTAGAAGAAGCACAGCCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTCACTACAATTGTCAGAAACACAACAATGTAGAAGAAGCACAGCCC  850

seq1  TATGGTCTTGATAGTTCCATGGGACAGCTCCAGAGCCTCTTGCCTGATGC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGTCTTGATAGTTCCATGGGACAGCTCCAGAGCCTCTTGCCTGATGC  900

seq1  ATGAGATTAGACCAATGGTTCTCAACTTGGGGGCCATGACCCCCTCT-GG  949
      ||||||||||||||  ||||||||||||||||||||||||||||||| ||
seq2  ATGAGATTAGACCATGGGTTCTCAACTTGGGGGCCATGACCCCCTCTGGG  950

seq1  GGGGTGTTAAAAGACCCTTTCACAAGGGTTGCATATCAAATATCCATGTT  999
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  GGGGTGTT-AAAGACCCTTTCACAAGGGTTGCATATCAAATATCCATGTT  999

seq1  GCAATTCATAACAATCATGT-AAGGGTCTGT-GATTCACAAAGAATGATA  1047
      || ||||||||| ||||||| |||||||||| ||||||| ||||||||||
seq2  GC-ATTCATAAC-ATCATGTAAAGGGTCTGTGGATTCAC-AAGAATGATA  1046

seq1  CCCCAGACTC-AAATAGTATGCAACAGCAAAGAGCATTTATTCAG-CAGG  1095
       || |||||| ||||||||||||||||| |||| || ||| |||| || |
seq2  TCCTAGACTCTAAATAGTATGCAACAGC-AAGACCA-TTAATCAGTCATG  1094

seq1  CAG-CCTGCATGCAGGGGTCCAACATAC-TTCAGGGTG  1131
      ||| ||||||||||||||| | |||||| |||||||||
seq2  CAGCCCTGCATGCAGGGGTTC-ACATACTTTCAGGGTG  1131