BAC Information

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BAC

Clone NameB6Ng01-129J09
Chromosome10 (Build37)
Map Location 104,053,903 - 104,054,321
singlet/doubletsinglet
Overlap genenone
Upstream geneEG627488, EG667692, EG667695, LOC100043292
Downstream geneLOC100042383, Tmtc2, EG627573
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-129J09.bB6Ng01-129J09.g
ACCDH931130DH931131
length921531
definitionDH931130|Mus musculus domesticus DNA, BAC clone: B6Ng01-129J09, 5' end.DH931131|Mus musculus domesticus DNA, BAC clone: B6Ng01-129J09, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcaactgaggaatgccgaagggctgacaagcagttgaaaaaaat
gttcaacatccttattcatcaggaaaatgcaaatcaaaaaaaaaaaaaaa
aaaaaacctgagattccacctcacaccagtcagaatggctaagatcaaaa
attcaggtgacagcagatgctggtgaggatgtggagaaagaggaacactc
ctccactgctggtgggattgcaagctggtacaaccactctggaagtcagt
gtggaggttcctcagaaaattggacataatactaccggaagatccagcaa
tacctctcctgggcatatacccagaagtagttccaactggtataagaaca
cctgctccactatgttcatagcagccttatttataacagccagatgctag
aaagaacccagatgtccctcaacagaagaatggatacagaatatgtggta
catttacacaatggagtactactcagctattaaaaacaatgaatttatga
aattctgaggcaagtggatatatatggaggatattatcctgagttaggta
acccagtcacaaaagaagtcacttgatatgcactcactgataagtggata
ttagcccagaaacctacaatacccaagatacaattttcaaaacacaaaag
aaatcaagaaggaagaccaacacgtggatacttctttcctccctaaaata
gggaataaaataccgatggaaggagttacagagacaaaggttgaagccta
gatgaaaggatgggccatccagagattgccccacctgtgggtccatccca
taatcagccaccaaacgcagacagtattgcatatgccagaacactgaggt
tatcatagtttccttgacttgtcccaaagcaggaaacttttcattacctt
gtgcctgcttcctggcaactt

ccgatctttccaagactgtttatcaggaatcggtgttggattttgtcaaa
tgttttctcagcatctaaccggatgattatggggtttttgtctttgagtt
tgtttatatagtggattacgttgatggatttccatatattaaaacatcca
tgcacccttggaatgaagcataattgatcatgatggatgattggtttgat
gtgttttttgattcagtttgcgagaattctattgagcatttttgcattga
tattcataagggaactctatctttatttggtctttatgtggttgagttat
cggagtaattgtggcttcatagaatgaattgggtagagtaccttctgttt
ctatttttttggaatagtttgagaagtattggaattaagtcttctttgaa
ggttttgatagaactctgcacttaacccatctggtcctgggctatttttg
tttgggacactattaatgactgcttctacttctttaggggatacaggact
gtttatatcactaatctgatcctgatttaat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_104053903_104054321
seq2: B6Ng01-129J09.b_90_530 (reverse)

seq1  TTTAATAG----------CTCCATTGTGTAAATGTACCACATTTTCTGTA  40
      ||||||||          |||||||||||||||||||||||| |||||||
seq2  TTTAATAGCTGAGTAGTACTCCATTGTGTAAATGTACCACATATTCTGTA  50

seq1  TCTATTCCTCTGTTGAGGGGCATCTGGGTTCTTTCCAGCTCCTGGCTATT  90
      || |||| ||||||||||| ||||||||||||||| |||  |||||| ||
seq2  TCCATTCTTCTGTTGAGGGACATCTGGGTTCTTTCTAGCATCTGGCTGTT  100

seq1  ATAAATAAGGCTGCTATGAATATAGTGGAGCATGTGTCCTTCTTACCGGT  140
      |||||||||||||||||||| ||||||||||| |||| |||  |||| ||
seq2  ATAAATAAGGCTGCTATGAACATAGTGGAGCAGGTGTTCTT-ATACCAGT  149

seq1  TGGGGCATCTTCTGGATATATGCCCAGAAGAGGTATTGCTGGATCCTCCG  190
      |||  |  ||||||| ||||||||||| ||||||||||||||||| ||||
seq2  TGGAACTACTTCTGGGTATATGCCCAGGAGAGGTATTGCTGGATCTTCCG  199

seq1  GTAGTACTATGTCCAATTTTCTGACGAACCGCCAGACGGATTTCCAGAGT  240
      |||||| ||||||||||||||||| ||||| ||| || || |||||||||
seq2  GTAGTATTATGTCCAATTTTCTGAGGAACCTCCACACTGACTTCCAGAGT  249

seq1  GGTTGTACAAGCCTGCAATCCCACCAACAATGGAGGAGTGTTCCTCTTTC  290
      |||||||| ||| ||||||||||||| || ||||||||||||||||||||
seq2  GGTTGTACCAGCTTGCAATCCCACCAGCAGTGGAGGAGTGTTCCTCTTTC  299

seq1  TCCACATCCTCGCCAGCATCTGCTGTCACCTGAATTTTTGATCTTAGCCA  340
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  TCCACATCCTCACCAGCATCTGCTGTCACCTGAATTTTTGATCTTAGCCA  349

seq1  TTCTGACTGGTGTGAGGTGGAATCTCAGG-------------GTTGTTTT  377
      |||||||||||||||||||||||||||||              || ||||
seq2  TTCTGACTGGTGTGAGGTGGAATCTCAGGTTTTTTTTTTTTTTTTTTTTT  399

seq1  GATTTGCATTTCCCTGATGATTAAGGATGTTGAACATTTTTT  419
      ||||||||||| |||||||| |||||||||||||||||||||
seq2  GATTTGCATTTTCCTGATGAATAAGGATGTTGAACATTTTTT  441


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