BAC Information

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BAC

Clone NameB6Ng01-129K14
Chromosome1 (Build37)10 (Build37)
Map Location 149,486,342 - 149,487,206104,054,178 - 104,054,363
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneB830045N13Rik, LOC100043240
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-129K14.bB6Ng01-129K14.g
ACCDH931186DH931187
length978797
definitionDH931186|Mus musculus domesticus DNA, BAC clone: B6Ng01-129K14, 5' end.DH931187|Mus musculus domesticus DNA, BAC clone: B6Ng01-129K14, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(149,486,342 - 149,487,206)(104,054,178 - 104,054,363)
sequence
gaattcacagaagcccagctgtgtttatttagttggcaatgtcctcctgg
tgtcctctattcactctggtccttgcaattcttcctgcacatctcctatg
gtattctggtatctctgaagtaaggaacctgattacattctccaatttag
actccctttctgcataatgtactgtctatgtgtctatgcactagtttgat
tctgctgcccgaggaagcctctctgataaaacttggcaaggctctgatgt
atgagcatcacagaaaatcattgccaatgactttccttgatatatacaat
aagttaggtatatagaatgtatgtcagatccatatagacgcccagagttt
agtctaagtactctttagctagttgattctgtgggctgttttcttctggc
gtactcgaaccctctcactcatactctttttctgcatttcacaagctcca
cctaatgtttgactctgcttctaccacttgttggatgaagcctctcaggt
aacaatgatactaagttctagtctacaagtagaacagagtatggttagga
atcattttttatccagtggttttggttctaccctaggtctctggcctatc
cagcttttggttcctctccatgaagacagtggagacattggttgaccact
cccacaaattctttgtcactatatgcatattttgcagatatctaatatat
atgcaattctcattaagatttaaacttcctctccttggatcttgttactt
agtttctttgggtctgtgacttgtagcatggttatcttgtactgagtaca
taccatgtttttctttctatgtctgagttaatttactcaacatgatcttt
tctagttctacccatttgcctcaaattttatgatgtcattatttttaata
tcctagaaatactgtgttgtataaatttaccacacctttgttatcggttc
ttcagttgggatacatctagttgttcta
gaattctcacctgaggaatatagaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagttagaatggctaagatcaaaaattcaggtgacagc
agatgctggggaggatgtggagaaagaggaacactcttactcaacttctt
ttggtttgaaataaaatattctctagaggctaatttatttgagcactaat
ccccaaattgtggtgttctttttggaagtcttgaaaactttgagacatgt
ccactaagtggctctagtatctcaagtttggaagtcttgattgttatact
gatgtctgattggggtcttgttccctcctctttctctgctgtcatgtaaa
caatgaggtgtgaataacttagcaccatagggctgactgaactaagctgg
tcctctgtgctttgctcattgtttttctaatttaattcaatttgacacaa
gctagggttatttaggaaaagggaatctcaattgagaaaatgccccaata
aaagtggccttgggtcaaatctgtgttgcatttatttgattgatatttta
agtggaaaggcataaaagtcctgtgggcagagctattcccagacagttgc
ttctgggatggcataagtaagtagtctggacaaagcttaggaagcaatca
ttcttctgttacaaggtcctcaatatattcctccaggttgtccatattgc
acttgagttccatgtactatcttgagttcgttcattggattctctga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_149486342_149487206
seq2: B6Ng01-129K14.b_50_914

seq1  GAATTCACAGAAGCCCAGCTGTGTTTATTTAGTTGGCAATGTCCTCCTGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACAGAAGCCCAGCTGTGTTTATTTAGTTGGCAATGTCCTCCTGG  50

seq1  TGTCCTCTATTCACTCTGGTCCTTGCAATTCTTCCTGCACATCTCCTATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCTCTATTCACTCTGGTCCTTGCAATTCTTCCTGCACATCTCCTATG  100

seq1  GTATTCTGGTATCTCTGAAGTAAGGAACCTGATTACATTCTCCAATTTAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTCTGGTATCTCTGAAGTAAGGAACCTGATTACATTCTCCAATTTAG  150

seq1  ACTCCCTTTCTGCATAATGTACTGTCTATGTGTCTATGCACTAGTTTGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCCTTTCTGCATAATGTACTGTCTATGTGTCTATGCACTAGTTTGAT  200

seq1  TCTGCTGCCCGAGGAAGCCTCTCTGATAAAACTTGGCAAGGCTCTGATGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCTGCCCGAGGAAGCCTCTCTGATAAAACTTGGCAAGGCTCTGATGT  250

seq1  ATGAGCATCACAGAAAATCATTGCCAATGACTTTCCTTGATATATACAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGCATCACAGAAAATCATTGCCAATGACTTTCCTTGATATATACAAT  300

seq1  AAGTTAGGTATATAGAATGTATGTCAGATCCATATAGACGCCCAGAGTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTAGGTATATAGAATGTATGTCAGATCCATATAGACGCCCAGAGTTT  350

seq1  AGTCTAAGTACTCTTTAGCTAGTTGATTCTGTGGGCTGTTTTCTTCTGGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTAAGTACTCTTTAGCTAGTTGATTCTGTGGGCTGTTTTCTTCTGGC  400

seq1  GTACTCGAACCCTCTCACTCATACTCTTTTTCTGCATTTCACAAGCTCCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTCGAACCCTCTCACTCATACTCTTTTTCTGCATTTCACAAGCTCCA  450

seq1  CCTAATGTTTGACTCTGCTTCTACCACTTGTTGGATGAAGCCTCTCAGGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAATGTTTGACTCTGCTTCTACCACTTGTTGGATGAAGCCTCTCAGGT  500

seq1  AACAATGATACTAAGTTCTAGTCTACAAGTAGAACAGAGTATGGTTAGGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAATGATACTAAGTTCTAGTCTACAAGTAGAACAGAGTATGGTTAGGA  550

seq1  ATCATTTTTTATCCAGTGGTTTTGGTTCTACCCTAGGTCTCTGGCCTATC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATTTTTTATCCAGTGGTTTTGGTTCTACCCTAGGTCTCTGGCCTATC  600

seq1  CAGCTTTTGGTTCCTCTCCATGAAGACAGTGGAGACATTGGTTGACCACT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTTTTGGTTCCTCTCCATGAAGACAGTGGAGACATTGGTTGACCACT  650

seq1  CCCACAAATTCTTTGTCACTATATGCATATTTTGCAGATATCTAATATAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACAAATTCTTTGTCACTATATGCATATTTTGCAGATATCTAATATAT  700

seq1  ATGCAATTCTCATTAAGATTTAAACTTCCTCTCCTTGGATCTTGTTACTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAATTCTCATTAAGATTTAAACTTCCTCTCCTTGGATCTTGTTACTT  750

seq1  AGTTTCTTTGGGTCTGTGACTTGTAGCATGGTTATCTTGTACTGAGTACA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTCTTTGGGTCTGTGACTTGTAGCATGGTTATCTTGTACTGAGTACA  800

seq1  TACCATGTTTTTCTTTCTATGTCTGAGTTAATTTACTCAACATGATCTTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCATGTTTTTCTTTCTATGTCTGAGTTAATTTACTCAACATGATCTTT  850

seq1  TCTAGTTCTACCCAT  865
      |||||||||||||||
seq2  TCTAGTTCTACCCAT  865

seq1: chr10_104054178_104054363
seq2: B6Ng01-129K14.g_70_255 (reverse)

seq1  GAGTGTTCCTCTTTCTCCACATCCTCGCCAGCATCTGCTGTCACCTGAAT  50
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  GAGTGTTCCTCTTTCTCCACATCCTCCCCAGCATCTGCTGTCACCTGAAT  50

seq1  TTTTGATCTTAGCCATTCTGACTGGTGTGAGGTGGAATCTCAGGGTTGTT  100
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  TTTTGATCTTAGCCATTCTAACTGGTGTGAGGTGGAATCTCAGGGTTGTT  100

seq1  TTGATTTGCATTTCCCTGATGATTAAGGATGTTGAACATTTTTTCAGGTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATTTGCATTTCCCTGATGATTAAGGATGTTGAACATTTTTTCAGGTG  150

seq1  CTTCTCTGCCATTCGGTATTCCTCAGGTGAGAATTC  186
      ||||||||||||||  ||||||||||||||||||||
seq2  CTTCTCTGCCATTCTATATTCCTCAGGTGAGAATTC  186