BAC Information

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BAC

Clone NameB6Ng01-129M15
Chromosome10 (Build37)
Map Location 66,976,692 - 67,092,262
singlet/doubletdoublet
Overlap geneEgr2, Gm237, LOC100040081
Upstream geneReep3, Jmjd1c, Nrbf2
Downstream geneLOC100039618, Zfp365, Plekhk1, Arid5b, LOC100040136, 1700040L02Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-129M15.bB6Ng01-129M15.g
ACCDH931282DH931283
length1,1531,135
definitionDH931282|Mus musculus domesticus DNA, BAC clone: B6Ng01-129M15, 5' end.DH931283|Mus musculus domesticus DNA, BAC clone: B6Ng01-129M15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(66,976,692 - 66,977,857)(67,091,120 - 67,092,262)
sequence
gaattcaaccttgtgctaagcgtgtggttggctactggcctttagattta
tttcacagaatctaccagctatcctaccgctgttgctaaacagaaatgtg
tgtggatcgtgattcttcctgggatctgtgttggcactgaccacagtggt
aaatccttcagagaattataattagaatcttgcttatccaacactcactt
attgctaggttaaaatttcagtggacaatttgtcagggttagaattttct
acaattttggcatctgtccaatattttctatagcagatcacttgcataat
gaacataaagttccgtgtgagtgtattagttgtggcattagtttaagttc
taagaatttaaattctaaagtaagcaaagtccaaagaagacacagagatc
tccagtaagcaaatgggaaggtcacatccctaatcactaggcaaagaaaa
ctcaaaaccaaaaggacacattgcacaagcctttaggatggctgctatta
gaaaatcaaaatagcaagtgttagtgtaatatgaattggaacattcctat
aactcttggcatggaaaacagagcagtatttcctaaaaaacttaaacatc
caattacattatcatcctcaaatccagcatctgggaatatagttcaaagt
agggactcaaatatttagatatgtttataacaacaggattcaccataaac
aaaaggtagggcaatcatgtggcagccaacaagcaaatgagtaaatgaaa
tttgtgagtatgcacacactagggttattcagtcttacagttgatcgaaa
ttcagatacacgcacatgaatgttagacagtggatgtctgtatttgcatc
cttgtggctaaagtgcttccagggagctagctcatgttttcaaaggtttt
atttaggatgtgatagcctgtactcatgagcttggcagacatggagacag
agagagtatgtggctgtagatggtgttcacagcagacagaaagccagagg
gagattccagaaatgaccagggctacccaccttcacgttgtggggggccc
aacagtgttgcttaaaatggtcagatttatgagtgcttcccaccatgaca
agacacaagcgagaaggacatttccgatgcccgtactctagagctcctct
cct
gaattcaaatggggcaggtacctggaggcaggagctgacgcgtaggctat
gaaagggtgcagcttactggcttgctccctgctttcttataggacccagc
accaccagcccagggatggcagtacccacaaggggctgggtccttcccca
ctgatcattaagaaaatgccctacagctagaagttatggaggctttttct
cccttgaggttccctcccttcagatggctctagctcgtgtcaagttgaca
taagctagccaacagtatttctgtcctgtcaccctggatgtgggtacagc
ttcacgcttgcccttgtggtcccaagctgatccctgcgtcttgaggctgc
ccatcttctctacagataaggaagaaagcgaaaaggagaagaagaaggac
acagggttaaagggaaatgactaactagtctgtgccttttgttttccgtg
gaaaggaaaaaaactttctcagaatccgcacttagattacttctgcttgt
cctctgttggacagaatgtgtcagatagggaccaccagccagaaagtgtc
tgggtgaaaggggtctgtggatccagtagggtcaaccttcaccaacattc
tcgagagccactcgccaggcatggtgacacatgtctgcagcctcagcact
tgggaagtagaggcaggaggagcctcggttcaaggttacctttgattaca
taaaaagttcaaaggtagcctgggacacaggagacccttaaaacaacaac
caaaaccaaccaaccaccaaacaaaaccttccaccccttccacccttgat
tacaatgaaaaaggaaatgacctataacatttagcatttcatataaaaaa
atataaaatattttttagacacggtcttccactgaccccagtgttcacag
atgcagctagaccgacttgttcaggaagccccaaggatcccctgtttcct
gtgctgccaatcccagatgtttgttgttggttgttttcgttttttttttt
ttttggtttttggtttttttgttgtggtgtattagcacaggctgtcttcg
ataccacccataaagggcattgaatcccactgcgaatggtgtgagctgcc
tatgtggtgctggaatgaactcaggaaccctagaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_66976692_66977857
seq2: B6Ng01-129M15.b_48_1200

seq1  GAATTCAACCTTGTGCTAAGCGTGTGGTTGGCTACTGGCCTTTAGATTTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAACCTTGTGCTAAGCGTGTGGTTGGCTACTGGCCTTTAGATTTA  50

seq1  TTTCACAGAATCTACCAGCTATCCTACCGCTGTTGCTAAACAGAAATGTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCACAGAATCTACCAGCTATCCTACCGCTGTTGCTAAACAGAAATGTG  100

seq1  TGTGGATCGTGATTCTTCCTGGGATCTGTGTTGGCACTGACCACAGTGGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGATCGTGATTCTTCCTGGGATCTGTGTTGGCACTGACCACAGTGGT  150

seq1  AAATCCTTCAGAGAATTATAATTAGAATCTTGCTTATCCAACACTCACTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCCTTCAGAGAATTATAATTAGAATCTTGCTTATCCAACACTCACTT  200

seq1  ATTGCTAGGTTAAAATTTCAGTGGACAATTTGTCAGGGTTAGAATTTTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCTAGGTTAAAATTTCAGTGGACAATTTGTCAGGGTTAGAATTTTCT  250

seq1  ACAATTTTGGCATCTGTCCAATATTTTCTATAGCAGATCACTTGCATAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATTTTGGCATCTGTCCAATATTTTCTATAGCAGATCACTTGCATAAT  300

seq1  GAACATAAAGTTCCGTGTGAGTGTATTAGTTGTGGCATTAGTTTAAGTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACATAAAGTTCCGTGTGAGTGTATTAGTTGTGGCATTAGTTTAAGTTC  350

seq1  TAAGAATTTAAATTCTAAAGTAAGCAAAGTCCAAAGAAGACACAGAGATC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAATTTAAATTCTAAAGTAAGCAAAGTCCAAAGAAGACACAGAGATC  400

seq1  TCCAGTAAGCAAATGGGAAGGTCACATCCCTAATCACTAGGCAAAGAAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGTAAGCAAATGGGAAGGTCACATCCCTAATCACTAGGCAAAGAAAA  450

seq1  CTCAAAACCAAAAGGACACATTGCACAAGCCTTTAGGATGGCTGCTATTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAAACCAAAAGGACACATTGCACAAGCCTTTAGGATGGCTGCTATTA  500

seq1  GAAAATCAAAATAGCAAGTGTTAGTGTAATATGAATTGGAACATTCCTAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATCAAAATAGCAAGTGTTAGTGTAATATGAATTGGAACATTCCTAT  550

seq1  AACTCTTGGCATGGAAAACAGAGCAGTATTTCCTAAAAAACTTAAACATC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCTTGGCATGGAAAACAGAGCAGTATTTCCTAAAAAACTTAAACATC  600

seq1  CAATTACATTATCATCCTCAAATCCAGCATCTGGGAATATAGTTCAAAGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTACATTATCATCCTCAAATCCAGCATCTGGGAATATAGTTCAAAGT  650

seq1  AGGGACTCAAATATTTAGATATGTTTATAACAACAGGATTCACCATAAAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGACTCAAATATTTAGATATGTTTATAACAACAGGATTCACCATAAAC  700

seq1  AAAAGGTAGGGCAATCATGTGGCAGCCAACAAGCAAATGAGTAAATGAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGGTAGGGCAATCATGTGGCAGCCAACAAGCAAATGAGTAAATGAAA  750

seq1  TTTGTGAGTATGCACACACTAGGGTTATTCAGTCTTACAGTTGATCGAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTGAGTATGCACACACTAGGGTTATTCAGTCTTACAGTTGATCGAAA  800

seq1  TTCAGATACACGCACATGAATGTTAGACAGTGGATGTCTGTATTTGCATC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGATACACGCACATGAATGTTAGACAGTGGATGTCTGTATTTGCATC  850

seq1  CTTGTGGCTAAAGTGCTTCCAGGGAGCTAGCTCATGTTTTCAAAGGTTTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTGGCTAAAGTGCTTCCAGGGAGCTAGCTCATGTTTTCAAAGGTTTT  900

seq1  ATTTAGGATGTGATAGCCTGTACTCATGAGCTTGGCAGAACATGGAGACA  950
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  ATTTAGGATGTGATAGCCTGTACTCATGAGCTTGGCAG-ACATGGAGACA  949

seq1  GAGAGAGTATGTGGCTGTAGATGGTGTTCACAGCAGACAGAAAGCCAAGA  1000
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  GAGAGAGTATGTGGCTGTAGATGGTGTTCACAGCAGACAGAAAGCC-AGA  998

seq1  GGGAAGATTCCAGAAATGACCAGGGCTAACACACCTCCAACGTTGT-GGG  1049
      ||| ||||||||||||||||||||||| || ||||| | ||||||| |||
seq2  GGG-AGATTCCAGAAATGACCAGGGCT-ACCCACCTTC-ACGTTGTGGGG  1045

seq1  GGCCCAACAAGTG-TGCTTAAAAATGGTCAAGATTTTATGAGTGCTTCCC  1098
      |||||||| |||| ||||| ||||||||| ||| ||||||||||||| ||
seq2  GGCCCAAC-AGTGTTGCTT-AAAATGGTC-AGA-TTTATGAGTGCTT-CC  1090

seq1  CACCAGTGACAAAGCAACAAGCAGAGAGGGAACATTT-CGATGCCCGTAC  1147
      ||||| |||| |||  |||||| |||| || |||||| ||||||||||||
seq2  CACCA-TGAC-AAGACACAAGC-GAGAAGG-ACATTTCCGATGCCCGTAC  1136

seq1  TCTTAAGAGCTCCTCTCCT  1166
      |||  ||||||||||||||
seq2  TCT--AGAGCTCCTCTCCT  1153

seq1: chr10_67091120_67092262
seq2: B6Ng01-129M15.g_69_1203 (reverse)

seq1  TTCTAGAGGTCCTGAGTTCAATTCCCAGCAACCACATA-GCAGCTCACAA  49
      |||||| | |||||||||||  | ||||| |||||||| ||||||||| |
seq2  TTCTAGGGTTCCTGAGTTCA--TTCCAGC-ACCACATAGGCAGCTCAC-A  46

seq1  CCATCTGCAGTGGGATCCAATGCCCTCTTCTGGTGTGTCT-GAAGACAGC  98
      ||||  |||||||||| ||||||||| || |||   || | |||||||||
seq2  CCATTCGCAGTGGGATTCAATGCCCT-TTATGGGTGGTATCGAAGACAGC  95

seq1  CTGTGCTAAAAACAACAACAACAAAAAAAACAAAAAACAAAAAAAAAAAA  148
      ||||||||| |   || |||||||||||| |||||| |   |||||||||
seq2  CTGTGCTAATA--CACCACAACAAAAAAACCAAAAACC---AAAAAAAAA  140

seq1  AAAAAACGAAAAACAAACAAACAAACAAACATCTGGGATTGGCAGCACAG  198
      |||||||| ||||||| |||   |||||||||||||||||||||||||||
seq2  AAAAAACG-AAAACAACCAA--CAACAAACATCTGGGATTGGCAGCACAG  187

seq1  GAAACAGGGGATCCTTGGGGCTTCCTGAAC-AGTCGGTCTAGCTGCATCT  247
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  GAAACAGGGGATCCTTGGGGCTTCCTGAACAAGTCGGTCTAGCTGCATCT  237

seq1  GTGAACACTGGGGTCAGTGGAAGACCGTGTCT-AAAAATATTTTATA-TT  295
      |||||||||||||||||||||||||||||||| |||||||||||||| ||
seq2  GTGAACACTGGGGTCAGTGGAAGACCGTGTCTAAAAAATATTTTATATTT  287

seq1  TTTTATATGAAATGCTAAATGTTATAGGTCATTTCCTTTTTCATTGTAAT  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATATGAAATGCTAAATGTTATAGGTCATTTCCTTTTTCATTGTAAT  337

seq1  CAAGGGTGGAAGGGGTGGAAGGTTTTGTTTGGTGGTTGGTTGGTTTTGGT  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGGTGGAAGGGGTGGAAGGTTTTGTTTGGTGGTTGGTTGGTTTTGGT  387

seq1  TGTTGTTTTAAGGGTCTCCTGTGTCCCAGGCTACCTTTGAACTTTTTATG  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGTTTTAAGGGTCTCCTGTGTCCCAGGCTACCTTTGAACTTTTTATG  437

seq1  TAATCAAAGGTAACCTTGAACCGAGGCTCCTCCTGCCTCTACTTCCCAAG  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCAAAGGTAACCTTGAACCGAGGCTCCTCCTGCCTCTACTTCCCAAG  487

seq1  TGCTGAGGCTGCAGACATGTGTCACCATGCCTGGCGAGTGGCTCTCGAGA  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGAGGCTGCAGACATGTGTCACCATGCCTGGCGAGTGGCTCTCGAGA  537

seq1  ATGTTGGTGAAGGTTGACCCTACTGGATCCACAGACCCCTTTCACCCAGA  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTGGTGAAGGTTGACCCTACTGGATCCACAGACCCCTTTCACCCAGA  587

seq1  CACTTTCTGGCTGGTGGTCCCTATCTGACACATTCTGTCCAACAGAGGAC  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTTCTGGCTGGTGGTCCCTATCTGACACATTCTGTCCAACAGAGGAC  637

seq1  AAGCAGAAGTAATCTAAGTGCGGATTCTGAGAAAGTTTTTTTCCTTTCCA  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAGAAGTAATCTAAGTGCGGATTCTGAGAAAGTTTTTTTCCTTTCCA  687

seq1  CGGAAAACAAAAGGCACAGACTAGTTAGTCATTTCCCTTTAACCCTGTGT  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGAAAACAAAAGGCACAGACTAGTTAGTCATTTCCCTTTAACCCTGTGT  737

seq1  CCTTCTTCTTCTCCTTTTCGCTTTCTTCCTTATCTGTAGAGAAGATGGGC  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCTTCTTCTCCTTTTCGCTTTCTTCCTTATCTGTAGAGAAGATGGGC  787

seq1  AGCCTCAAGACGCAGGGATCAGCTTGGGACCACAAGGGCAAGCGTGAAGC  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTCAAGACGCAGGGATCAGCTTGGGACCACAAGGGCAAGCGTGAAGC  837

seq1  TGTACCCACATCCAGGGTGACAGGACAGAAATACTGTTGGCTAGCTTATG  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACCCACATCCAGGGTGACAGGACAGAAATACTGTTGGCTAGCTTATG  887

seq1  TCAACTTGACACGAGCTAGAGCCATCTGAAGGGAGGGAACCTCAAGGGAG  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACTTGACACGAGCTAGAGCCATCTGAAGGGAGGGAACCTCAAGGGAG  937

seq1  AAAAAGCCTCCATAACTTCTAGCTGTAGGGCATTTTCTTAATGATCAGTG  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGCCTCCATAACTTCTAGCTGTAGGGCATTTTCTTAATGATCAGTG  987

seq1  GGGAAGGACCCAGCCCCTTGTGGGTACTGCCATCCCTGGGCTGGTGGTGC  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAGGACCCAGCCCCTTGTGGGTACTGCCATCCCTGGGCTGGTGGTGC  1037

seq1  TGGGTCCTATAAGAAAGCAGGGAGCAAGCCAGTAAGCTGCACCCTTTCAT  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTCCTATAAGAAAGCAGGGAGCAAGCCAGTAAGCTGCACCCTTTCAT  1087

seq1  AGCCTACGCGTCAGCTCCTGCCTCCAGGTACCTGCCCCATTTGAATTC  1143
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTACGCGTCAGCTCCTGCCTCCAGGTACCTGCCCCATTTGAATTC  1135