BAC Information

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BAC

Clone NameB6Ng01-130A23
Chromosome7 (Build37)10 (Build37)
Map Location 14,926,643 - 14,927,832104,053,903 - 104,054,363
singlet/doubletsingletsinglet
Overlap genenone
Upstream genePla2g4c, LOC666225, Cabp5, LOC666232, Gm767, LOC666243, 9230107M04Rik, EG666256, LOC666267, LOC100042624, LOC100043194, Sult2a1, EG620627, EG434121, EG629203, LOC677512, EG629219, EG434123
Downstream gene2810007J24Rik, EG638251, B430211C08Rik, EG194588, LOC666352, EG666312, LOC666365, LOC671978, LOC100042677, LOC100042685, EG666381, LOC100042691, LOC100042702, LOC100042707, LOC100042711, LOC100042714, LOC100042717, LOC100042721, LOC100042728, LOC100042731, LOC100042735, LOC100042739, LOC100042742, LOC235841, EG666407, LOC666337
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-130A23.bB6Ng01-130A23.g
ACCDH931471DH931472
length1,211470
definitionDH931471|Mus musculus domesticus DNA, BAC clone: B6Ng01-130A23, 5' end.DH931472|Mus musculus domesticus DNA, BAC clone: B6Ng01-130A23, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(14,926,643 - 14,927,832)(104,053,903 - 104,054,363)
sequence
tttttcctgttctgatgtcagcagcagctacgacagtggttcctggatgt
tctgtagatagaacatctagggaagagaataggaacaacagattcaagca
tcaccaaagaatatcagagataggtccttcccaccctgcccactaccaat
acttctgtggcttgcttgcacccaggaagctgcccctgcttggggtgtca
caatgggtagtaagatggcttctgccaccagtgtcctgaaggtagtgaat
ccacatgctacattaataagattccctacagaagagacaaacctaaactc
agagcctcagaaactttgggatctgttgcactaccctcccactcctctgt
catttcacagaattctaaaggaaatatgtccccagatttactgatgcatc
aggggccaccagacacaaagaaataataaaagcattacctcagaaataca
gaaggaaacctgtctcaagaggaaatggaatctatccagagtggacatcc
agaatgatggtcgtggctgctgcttgtcaccagacagaaggattggcttt
gcaataaaggacttctacaaagtcaaatggaaagtcatatattaaacaac
tttaataaatattgtgtaagcagaatgaagtgtagaaactccaggtggtc
acttgtatctcctacattatgtatcttggtcagattctccacaaggtgac
ctgtacacttactaaagtctacatttttaaatgcaaaaaaaaaatcagag
atggaagagtgaatcttaggcatagaagatataatagaaaaaattcatac
atcagtcaaaaacaatgttaaatctgaaaaaaattcctgacacaaaacat
tcagaaaatctgggaaattgtgaagagacctagcctaagaataataggaa
tagaagaagctaaacagtcccaggggcaaggcccagaaaatattttcaac
aaaatcacagatgaaaacattcccaacctaaagaaagaaatgcctataaa
catacaagaagtttataaacaccaatttgtctggaccagaaaagaaaatc
tctcagcacataattatcaaatacaaaatctacaaaataaagaagatatt
aaaagcagcagggcaaaagcggtacatacaacgcagacttcagaattata
cctgactctccacaaattaagctagaagattcgacgaatcttgcacttaa
aatccaaatgc
gaattctcacctgaggaatacctaatggctgagaagcacctgaaaaaatg
ctcagcatccttaatcatcagagaaatgcaaatcaaaacaaccctgagat
tccatctcacatcagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcaaggatatggagaaagaggaagactcctccattgttggtg
ggattgcaagcttgtacaaccactctagaaatcagtctggtggttcctca
gaaaattggacatagtactactgcaggatcctgcaatacctctcctgggc
atatatccagatgtcccaaccggtaagaaggacacatgctccactatgtt
cattgcagccttatttataatagccagaagctggaaagaacccagatgcc
ccctcaacagaggaatggatacagaaaatgtggtacaatttacacaatgg
agtactactcagctattaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_14926643_14927832
seq2: B6Ng01-130A23.b_50_1211 (reverse)

seq1  GCATTTGTGATTTTTAAAGTTGCAAGATATCTGTCTGGATCCTTCTAGCT  50
      ||||||| ||||||  ||| |||||||| || |||  ||  |||||||||
seq2  GCATTTG-GATTTT--AAG-TGCAAGAT-TC-GTC--GAATCTTCTAGCT  42

seq1  TTTAAAATTTTTGTGGAGAAGTCAGGTATAATTCTGATAGGTCTGCGTTT  100
      |    ||  ||||||||| |||||||||||||||||  | ||||||| ||
seq2  T----AA--TTTGTGGAG-AGTCAGGTATAATTCTG--AAGTCTGCG-TT  82

seq1  GTATGTTACCCGGCCTTTTGCCCTTGCTGCTTTTAATATTCTTTCTTTAT  150
      ||||| ||||    ||||||||| |||||||||||||||   ||||||||
seq2  GTATG-TACC---GCTTTTGCCC-TGCTGCTTTTAATAT--CTTCTTTAT  125

seq1  TTTGTAGATTTTGTATTTTGATAATTATGTGCTGAGAGGATTTTCTTTTC  200
      ||||||||||||||| ||||||||||||||||||||| ||||||||||||
seq2  TTTGTAGATTTTGTA-TTTGATAATTATGTGCTGAGA-GATTTTCTTTTC  173

seq1  TGGTCCAGACAAATTGGTGTTTTATAAACTTCTTGTATGTTTATAGGCAT  250
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  TGGTCCAGACAAATTGGTG-TTTATAAACTTCTTGTATGTTTATAGGCAT  222

seq1  TTCTTTCTTTAGGTTGGGAATGTTTTCATCTGTGATTTTGTTGAAAATAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTCTTTAGGTTGGGAATGTTTTCATCTGTGATTTTGTTGAAAATAT  272

seq1  TTTCTGGGCCTTGCCCCTGGGACTGTTTAGCTTCTTCTATTCCTATTATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGGGCCTTGCCCCTGGGACTGTTTAGCTTCTTCTATTCCTATTATT  322

seq1  CTTAGGCTAGGTCTCTTCACAATTTCCCAGATTTTCTGAATGTTTTGTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGGCTAGGTCTCTTCACAATTTCCCAGATTTTCTGAATGTTTTGTGT  372

seq1  CAGGAATTTTTTTCAGATTTAACATTGTTTTTGACTGATGTATGAATTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAATTTTTTTCAGATTTAACATTGTTTTTGACTGATGTATGAATTTT  422

seq1  TTCTATTATATCTTCTATGCCTAAGATTCACTCTTCCATCTCTGATTTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTATTATATCTTCTATGCCTAAGATTCACTCTTCCATCTCTGATTTTT  472

seq1  TTTTTGCATTTAAAAATGTAGACTTTAGTAAGTGTACAGGTCACCTTGTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGCATTTAAAAATGTAGACTTTAGTAAGTGTACAGGTCACCTTGTG  522

seq1  GAGAATCTGACCAAGATACATAATGTAGGAGATACAAGTGACCACCTGGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAATCTGACCAAGATACATAATGTAGGAGATACAAGTGACCACCTGGA  572

seq1  GTTTCTACACTTCATTCTGCTTACACAATATTTATTAAAGTTGTTTAATA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCTACACTTCATTCTGCTTACACAATATTTATTAAAGTTGTTTAATA  622

seq1  TATGACTTTCCATTTGACTTTGTAGAAGTCCTTTATTGCAAAGCCAATCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGACTTTCCATTTGACTTTGTAGAAGTCCTTTATTGCAAAGCCAATCC  672

seq1  TTCTGTCTGGTGACAAGCAGCAGCCACGACCATCATTCTGGATGTCCACT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTCTGGTGACAAGCAGCAGCCACGACCATCATTCTGGATGTCCACT  722

seq1  CTGGATAGATTCCATTTCCTCTTGAGACAGGTTTCCTTCTGTATTTCTGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGATAGATTCCATTTCCTCTTGAGACAGGTTTCCTTCTGTATTTCTGA  772

seq1  GGTAATGCTTTTATTATTTCTTTGTGTCTGGTGGCCCCTGATGCATCAGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAATGCTTTTATTATTTCTTTGTGTCTGGTGGCCCCTGATGCATCAGT  822

seq1  AAATCTGGGGACATATTTCCTTTAGAATTCTGTGAAATGACAGAGGAGTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCTGGGGACATATTTCCTTTAGAATTCTGTGAAATGACAGAGGAGTG  872

seq1  GGAGGGTAGTGCAACAGATCCCAAAGTTTCTGAGGCTCTGAGTTTAGGTT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGGTAGTGCAACAGATCCCAAAGTTTCTGAGGCTCTGAGTTTAGGTT  922

seq1  TGTCTCTTCTGTAGGGAATCTTATTAATGTAGCATGTGGATTCACTACCT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTCTTCTGTAGGGAATCTTATTAATGTAGCATGTGGATTCACTACCT  972

seq1  TCAGGACACTGGTGGCAGAAGCCATCTTACTACCCATTGTGACACCCCAA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGACACTGGTGGCAGAAGCCATCTTACTACCCATTGTGACACCCCAA  1022

seq1  GCAGGGGCAGCTTCCTGGGTGCAAGCAAGCCACAGAAGTATTGGTAGTGG  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGGGCAGCTTCCTGGGTGCAAGCAAGCCACAGAAGTATTGGTAGTGG  1072

seq1  GCAGGGTGGGAAGGACCTATCTCTGATATTCTTTGGTGATGCTTGAATCT  1150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGGTGGGAAGGACCTATCTCTGATATTCTTTGGTGATGCTTGAATCT  1122

seq1  GTTGTTCCTATTCTCTTCCCTAGATGTTCTATCTACAGAA  1190
      ||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTTCCTATTCTCTTCCCTAGATGTTCTATCTACAGAA  1162

seq1: chr10_104053903_104054363
seq2: B6Ng01-130A23.g_67_536 (reverse)

seq1  TTTAATAG----------CTCCATTGTGTAAA-TGTACCACATTTTCTGT  39
      ||||||||          |||||||||||||| |||||||||||||||||
seq2  TTTAATAGCTGAGTAGTACTCCATTGTGTAAATTGTACCACATTTTCTGT  50

seq1  ATCTATTCCTCTGTTGA-GGGGCATCTGGGTTCTTTCCAGCTCCTGGCTA  88
      ||| ||||||||||||| |||||||||||||||||||||||| |||||||
seq2  ATCCATTCCTCTGTTGAGGGGGCATCTGGGTTCTTTCCAGCTTCTGGCTA  100

seq1  TTATAAATAAGGCTGCTATGAATATAGTGGAGCATGTGTCCTTCTTACCG  138
      |||||||||||||||| ||||| |||||||||||||||||||||||||||
seq2  TTATAAATAAGGCTGCAATGAACATAGTGGAGCATGTGTCCTTCTTACCG  150

seq1  GTTGGGGCATCTTCTGGATATATGCCCAGAAGAGGTATTGCTGGATCCTC  188
      |||||| ||   ||||||||||||||||| ||||||||||| ||||||| 
seq2  GTTGGGACA---TCTGGATATATGCCCAGGAGAGGTATTGCAGGATCCTG  197

seq1  CGGTAGTACTATGTCCAATTTTCTGACGAACCGCCAGACGGATTTCCAGA  238
      | |||||||||||||||||||||||| ||||| |||||| |||||| |||
seq2  CAGTAGTACTATGTCCAATTTTCTGAGGAACCACCAGACTGATTTCTAGA  247

seq1  GTGGTTGTACAAGCCTGCAATCCCACCAACAATGGAGGAGTGTTCCTCTT  288
      |||||||||||||| |||||||||||||||||||||||||| ||||||||
seq2  GTGGTTGTACAAGCTTGCAATCCCACCAACAATGGAGGAGTCTTCCTCTT  297

seq1  TCTCCACATCCTCGCCAGCATCTGCTGTCACCTGAATTTTTGATCTTAGC  338
      |||||| ||||| |||||||||||||||||||||||||||||||||||||
seq2  TCTCCATATCCTTGCCAGCATCTGCTGTCACCTGAATTTTTGATCTTAGC  347

seq1  CATTCTGACTGGTGTGAGGTGGAATCTCAGGGTTGTTTTGATTTGCATTT  388
      ||||||||||| |||||| |||||||||||||||||||||||||||||||
seq2  CATTCTGACTGATGTGAGATGGAATCTCAGGGTTGTTTTGATTTGCATTT  397

seq1  CCCTGATGATTAAGGATGTTGAACATTTTTTCAGGTGCTTCTCTGCCATT  438
      | |||||||||||||||| ||| |||||||||||||||||||| ||||||
seq2  CTCTGATGATTAAGGATGCTGAGCATTTTTTCAGGTGCTTCTCAGCCATT  447

seq1  CGGTATTCCTCAGGTGAGAATTC  461
       ||||||||||||||||||||||
seq2  AGGTATTCCTCAGGTGAGAATTC  470