BAC Information

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BAC

Clone NameB6Ng01-130D02
Chromosome10 (Build37)
Map Location 68,993,980 - 69,138,960
singlet/doubletdoublet
Overlap geneAnk3, LOC100039734
Upstream gene1700040L02Rik, EG665342, Tmem26, A930033H14Rik, Rhobtb1, LOC100040182, Cdc2a, LOC100039696, EG382371
Downstream gene5730416O20Rik, Ccdc6, 2310015B20Rik, Slc16a9, LOC632955, 1200015N20Rik, LOC665398, Phyhipl, EG665429
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-130D02.bB6Ng01-130D02.g
ACCDH931569DH931570
length1,2041,146
definitionDH931569|Mus musculus domesticus DNA, BAC clone: B6Ng01-130D02, 5' end.DH931570|Mus musculus domesticus DNA, BAC clone: B6Ng01-130D02, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(68,993,980 - 68,995,205)(69,137,804 - 69,138,960)
sequence
gaattcttttaatcggtcattaaagcatccatttttctgcacagtaaagc
gaaagcaagagattacagccaccagcctcctttttgccaggatcccctga
taacatagcttagtgtgggtatctttgcaatgcttggataagcggttttt
ataagtctctttaatggaacccttcaaagggtagcaaataacagaaaaaa
tgggacatcagtgcaagcctaaagagaagaataaatccccatcctgagtg
ttacattgctgtcccacttggcgaaatgctcctgctcaaagatctcacag
cactggtagagttgggagcccggcaggcagtgtttgtttatctgtggacc
acctcatccaataccctcttctttccattctttctctaatcctacactca
ggacattaggcataaacaaagacttttcttagaagggaaggtgttgaaga
gatgactcagcagttaagagcaccgactgttcttccagaggacctgggtt
caatttccagcacccacatggtgggtcccaacctgtaataactctagttt
gagggggggatctggcgccctcttctggccatcttatgcactgcatgcat
gcggtacacattcaagtaaacattcgtacacataaaataagtttctaaaa
aaaatttttttttaaaatgtcagtagtactctggtaaaatgacagagcag
gtaggttatctctgtggcttgtcgagtgaagagttgaagatttaaatggg
atattcagacttgactttacctgcatggatagttcagtttatggagaatt
catacaaagcaccgacttcatagtttctccctcagagcataatgcaaata
agcccaggctcatctcactgcagtcagggacagatcaacccagggacgtt
actatcattccccagactgcccggtcctgaagatgagcaagcactgaatt
aatgaaaacttgaaggaccatcctaccgtgttaatggtttttctaccttt
tattactctgcagagaacatttcagaacagcagcagaaacggggagagac
agtagcagctgcctcaaagcttgagatccccaggttcccgaggggtgggg
cacgccatcaatgcttcctgcagcttgagtggtggctactgtttggtaat
gcgacgggacacattatatccccagggcagagatctccatggtcgcttga
gcag
gaattcagttatttataaagtataaacagatgagatttttaaatgacgct
tataagttttagaggggctggagagatggtcctgagttcaattcccagca
accacatggtggctcacaaccatctatactggaatctgatgccctcttct
ggcatgcaagtgtacatgcagatagagcacactcaatcaatcaatcaatc
aatcactcaatcaatcttttaaaaagttttggaaacatttagaattatct
cagcagaaaataaatttactgagaagaaacacatttaatacaaaaacaat
acaaagccagagtttatgagcctcatttcagcctcaattccgttaatagc
ttagaataagaacttggatgtagcatataactcatccttcacatattacc
cacactgataatatgaggagaatatttagaggttcatagaggtcccttct
ctaattctagaagtccttacctttgcaaagcaatgatctgggttcctgaa
ctaggggaaggtctgaggctcagaggcaaccagtttgactctacttccct
gtctgctgggaaacctgggtttgtgcaaagtatccatgagtcctcttctg
agactcttggatcttgagcttcccctgagattcatctcactgtggctgaa
gttagatatcagtagagacaagagagtgaagaaccacaagcgttcacacc
aatgagtggggtgcagcttgcacctgtcctaggaaggagaaacctgagac
ttcttctgattggctgagtctatcttatgtttttgtttgtttgtttgttt
gtttgctctaggtaactgctttcctgcggtttccctaatcttcctttggg
taacaacactagactcaaactgtcatcttctataaagccacactgtcaca
tggatgtagtccttagtaaaataacagtgttggaaacagagggtactgta
gtgctcagctatgcaagtttctatctctagcttcttggagcctgcttttc
ctcttgacatcttgggttggctttcagcatctcttccctttactttccca
ttaggacctcaatatcaactgtattactgttaccgaactttttcctaagc
aacaatgaatgactgtaatggctcccaccagcattgcaggtggaca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_68993980_68995205
seq2: B6Ng01-130D02.b_46_1248

seq1  GAATTCTTTTAATCGGTCATTAAAGCATCCATTTTTCTGCACAGTAAAGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTTAATCGGTCATTAAAGCATCCATTTTTCTGCACAGTAAAGC  50

seq1  GAAAGCAAGAGATTACAGCCACCAGCCTCCTTTTTGCCAGGATCCCCTGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGCAAGAGATTACAGCCACCAGCCTCCTTTTTGCCAGGATCCCCTGA  100

seq1  TAACATAGCTTAGTGTGGGTATCTTTGCAATGCTTGGATAAGCGGTTTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACATAGCTTAGTGTGGGTATCTTTGCAATGCTTGGATAAGCGGTTTTT  150

seq1  ATAAGTCTCTTTAATGGAACCCTTCAAAGGGTAGCAAATAACAGAAAAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGTCTCTTTAATGGAACCCTTCAAAGGGTAGCAAATAACAGAAAAAA  200

seq1  TGGGACATCAGTGCAAGCCTAAAGAGAAGAATAAATCCCCATCCTGAGTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGACATCAGTGCAAGCCTAAAGAGAAGAATAAATCCCCATCCTGAGTG  250

seq1  TTACATTGCTGTCCCACTTGGCGAAATGCTCCTGCTCAAAGATCTCACAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACATTGCTGTCCCACTTGGCGAAATGCTCCTGCTCAAAGATCTCACAG  300

seq1  CACTGGTAGAGTTGGGAGCCCGGCAGGCAGTGTTTGTTTATCTGTGGACC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGGTAGAGTTGGGAGCCCGGCAGGCAGTGTTTGTTTATCTGTGGACC  350

seq1  ACCTCATCCAATACCCTCTTCTTTCCATTCTTTCTCTAATCCTACACTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCATCCAATACCCTCTTCTTTCCATTCTTTCTCTAATCCTACACTCA  400

seq1  GGACATTAGGCATAAACAAAGACTTTTCTTAGAAGGGAAGGTGTTGAAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACATTAGGCATAAACAAAGACTTTTCTTAGAAGGGAAGGTGTTGAAGA  450

seq1  GATGACTCAGCAGTTAAGAGCACCGACTGTTCTTCCAGAGGACCTGGGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGACTCAGCAGTTAAGAGCACCGACTGTTCTTCCAGAGGACCTGGGTT  500

seq1  CAATTTCCAGCACCCACATGGTGGGTCCCAACCTGTAATAACTCTAGTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTTCCAGCACCCACATGGTGGGTCCCAACCTGTAATAACTCTAGTTT  550

seq1  GAGGGGGGGATCTGGCGCCCTCTTCTGGCCATCTTATGCACTGCATGCAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGGGGGATCTGGCGCCCTCTTCTGGCCATCTTATGCACTGCATGCAT  600

seq1  GCGGTACACATTCAAGTAAACATTCGTACACATAAAATAAGTTTCTAAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGGTACACATTCAAGTAAACATTCGTACACATAAAATAAGTTTCTAAAA  650

seq1  AAAATTTTTTTTTAAAATGTCAGTAGTACTCTGGTAAAATGACAGAGCAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTTTTTTTTAAAATGTCAGTAGTACTCTGGTAAAATGACAGAGCAG  700

seq1  GTAGGTTATCTCTGTGGCTTGTCGAGTGAAGAGTTGAAGATTTAAATGGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGGTTATCTCTGTGGCTTGTCGAGTGAAGAGTTGAAGATTTAAATGGG  750

seq1  ATATTCAGACTTGACTTTACCTGCATGGATAGTTCAGTTTATGGAGAATT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTCAGACTTGACTTTACCTGCATGGATAGTTCAGTTTATGGAGAATT  800

seq1  CATACAAAGCACCGACTTCATAGTTTCTCCCTCAGAGCATAATGCAAATA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACAAAGCACCGACTTCATAGTTTCTCCCTCAGAGCATAATGCAAATA  850

seq1  AGCCCAGGCTCATCTCACTGCAGTCAGGGACAGATCAACCCAGGGACGTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCAGGCTCATCTCACTGCAGTCAGGGACAGATCAACCCAGGGACGTT  900

seq1  ACTATCATTCCCCAGACTGCCCGGTCCTGAAGATGAGCAAGCACTGAATT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATCATTCCCCAGACTGCCCGGTCCTGAAGATGAGCAAGCACTGAATT  950

seq1  AATGAAAAACTTGAAGGAACCATCCTACCGTGTTAATGGTTTTTCTACCT  1000
      |||| |||||||||||| ||||||||||||||||||||||||||||||||
seq2  AATG-AAAACTTGAAGG-ACCATCCTACCGTGTTAATGGTTTTTCTACCT  998

seq1  TTTATTACTCTGCCAGAGAAACATTCCAGAACAGCAGCAGAAAC-GGGAG  1049
      |||||||||||| ||||| |||||| |||||||||||||||||| |||||
seq2  TTTATTACTCTG-CAGAG-AACATTTCAGAACAGCAGCAGAAACGGGGAG  1046

seq1  AGACAGGTTAGCAGCTG-CTCAAAGCTGAAGGAACCCCCAGGTCACGGAG  1098
      ||||||  ||||||||| |||||||||  ||  | ||||||||  | |||
seq2  AGACAG--TAGCAGCTGCCTCAAAGCTTGAG--ATCCCCAGGTTCCCGAG  1092

seq1  GGGTGGGGCAACCGCCATCAATGCTCCCTGCCAGCCTTTGAGTGGTGGTT  1148
      ||||||||||  ||||||||||||| |||| ||||  |||||||||||  
seq2  GGGTGGGGCA--CGCCATCAATGCTTCCTG-CAGC--TTGAGTGGTGG-C  1136

seq1  TACTGTTT-GTAATGCGCAGCCGCAGAACAACCATTAAATAACCCACAGT  1197
      |||||||| ||||||||      | | |||  ||||| ||   || ||| 
seq2  TACTGTTTGGTAATGCG-----ACGGGACA--CATTATAT---CCCCAGG  1176

seq1  GCGCAGGATCTCCATGGGTCGCTGGAGCA  1226
      ||  | ||||||||| ||||||| |||||
seq2  GCAGA-GATCTCCAT-GGTCGCTTGAGCA  1203

seq1: chr10_69137804_69138960
seq2: B6Ng01-130D02.g_66_1211 (reverse)

seq1  TGTCCACCTGCAATGGCTGTGTGGGAGCCATTACAGTCATTCATTGTTGC  50
      |||||||||||||| |||| ||||||||||||||||||||||||||||||
seq2  TGTCCACCTGCAAT-GCTG-GTGGGAGCCATTACAGTCATTCATTGTTGC  48

seq1  TTAGTGAAAAG-TCAGTAACAAGTTAATTACAGTTGATATTGAGGTCCTA  99
      ||||  ||||| || ||||| |||  | ||||||||||||||||||||||
seq2  TTAGGAAAAAGTTCGGTAAC-AGT--AATACAGTTGATATTGAGGTCCTA  95

seq1  ATGGGAAAGTAAAGGGGAGAGATGCTGGAAGGCACACCCCAAGATGTCAG  149
      |||||||||||||||| |||||||||| |||   || |||||||||||| 
seq2  ATGGGAAAGTAAAGGGAAGAGATGCTGAAAG--CCAACCCAAGATGTCAA  143

seq1  GAGGAAAAGCAAGGCTCCAAGAGGCTAGAGATAGAAACTTGCATAGCTGA  199
      |||||||||| ||||||||||| |||||||||||||||||||||||||||
seq2  GAGGAAAAGC-AGGCTCCAAGAAGCTAGAGATAGAAACTTGCATAGCTGA  192

seq1  GCACTACAGTTACCCTCTTGTGTTCCAACACTGTTATTTTACTAAGGACT  249
      ||||||||| ||||||| ||| ||||||||||||||||||||||||||||
seq2  GCACTACAG-TACCCTC-TGT-TTCCAACACTGTTATTTTACTAAGGACT  239

seq1  ACATCCATGTGACAGTGTGGCCTTAATAGAAGATGACAGTTTGAGTCTAG  299
      |||||||||||||||||||| ||| |||||||||||||||||||||||||
seq2  ACATCCATGTGACAGTGTGG-CTTTATAGAAGATGACAGTTTGAGTCTAG  288

seq1  TGTTGTTACCCAAAGGAAGATTAGGGAAACCGCAGGAAAGCAGTTACCTA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGTTACCCAAAGGAAGATTAGGGAAACCGCAGGAAAGCAGTTACCTA  338

seq1  GAGCAAACAAACAAACAAACAAACAAAAACATAAGATAGACTCAGCCAAT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAAACAAACAAACAAACAAACAAAAACATAAGATAGACTCAGCCAAT  388

seq1  CAGAAGAAGTCTCAGGTTTCTCCTTCCTAGGACAGGTGCAAGCTGCACCC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAGAAGTCTCAGGTTTCTCCTTCCTAGGACAGGTGCAAGCTGCACCC  438

seq1  CACTCATTGGTGTGAACGCTTGTGGTTCTTCACTCTCTTGTCTCTACTGA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCATTGGTGTGAACGCTTGTGGTTCTTCACTCTCTTGTCTCTACTGA  488

seq1  TATCTAACTTCAGCCACAGTGAGATGAATCTCAGGGGAAGCTCAAGATCC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTAACTTCAGCCACAGTGAGATGAATCTCAGGGGAAGCTCAAGATCC  538

seq1  AAGAGTCTCAGAAGAGGACTCATGGATACTTTGCACAAACCCAGGTTTCC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGTCTCAGAAGAGGACTCATGGATACTTTGCACAAACCCAGGTTTCC  588

seq1  CAGCAGACAGGGAAGTAGAGTCAAACTGGTTGCCTCTGAGCCTCAGACCT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAGACAGGGAAGTAGAGTCAAACTGGTTGCCTCTGAGCCTCAGACCT  638

seq1  TCCCCTAGTTCAGGAACCCAGATCATTGCTTTGCAAAGGTAAGGACTTCT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCTAGTTCAGGAACCCAGATCATTGCTTTGCAAAGGTAAGGACTTCT  688

seq1  AGAATTAGAGAAGGGACCTCTATGAACCTCTAAATATTCTCCTCATATTA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATTAGAGAAGGGACCTCTATGAACCTCTAAATATTCTCCTCATATTA  738

seq1  TCAGTGTGGGTAATATGTGAAGGATGAGTTATATGCTACATCCAAGTTCT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTGTGGGTAATATGTGAAGGATGAGTTATATGCTACATCCAAGTTCT  788

seq1  TATTCTAAGCTATTAACGGAATTGAGGCTGAAATGAGGCTCATAAACTCT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCTAAGCTATTAACGGAATTGAGGCTGAAATGAGGCTCATAAACTCT  838

seq1  GGCTTTGTATTGTTTTTGTATTAAATGTGTTTCTTCTCAGTAAATTTATT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTTGTATTGTTTTTGTATTAAATGTGTTTCTTCTCAGTAAATTTATT  888

seq1  TTCTGCTGAGATAATTCTAAATGTTTCCAAAACTTTTTAAAAGATTGATT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGCTGAGATAATTCTAAATGTTTCCAAAACTTTTTAAAAGATTGATT  938

seq1  GAGTGATTGATTGATTGATTGATTGAGTGTGCTCTATCTGCATGTACACT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGATTGATTGATTGATTGATTGAGTGTGCTCTATCTGCATGTACACT  988

seq1  TGCATGCCAGAAGAGGGCATCAGATTCCAGTATAGATGGTTGTGAGCCAC  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATGCCAGAAGAGGGCATCAGATTCCAGTATAGATGGTTGTGAGCCAC  1038

seq1  CATGTGGTTGCTGGGAATTGAACTCAGGACCATCTCTCCAGCCCCTCTAA  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTGGTTGCTGGGAATTGAACTCAGGACCATCTCTCCAGCCCCTCTAA  1088

seq1  AACTTATAAGCGTCATTTAAAAATCTCATCTGTTTATACTTTATAAATAA  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTATAAGCGTCATTTAAAAATCTCATCTGTTTATACTTTATAAATAA  1138

seq1  CTGAATTC  1157
      ||||||||
seq2  CTGAATTC  1146