BAC Information

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BAC

Clone NameB6Ng01-130J03
Chromosome10 (Build37)
Map Location 105,939,755 - 106,125,534
singlet/doubletdoublet
Overlap genePpfia2, Olfr1556-ps1
Upstream geneTmtc2, EG627573, BC067068, Ccdc59, EG667758, EG639162
Downstream gene8430416H19Rik, Lin7a, Myf5, Myf6, Ptprq
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-130J03.bB6Ng01-130J03.g
ACCDH931850DH931851
length1,131590
definitionDH931850|Mus musculus domesticus DNA, BAC clone: B6Ng01-130J03, 5' end.DH931851|Mus musculus domesticus DNA, BAC clone: B6Ng01-130J03, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(105,939,755 - 105,940,883)(106,124,945 - 106,125,534)
sequence
gaattctaacaggggatttggcaataggacaatattgcatgttgcatgag
ttcattctgactgaattatctaagaagctagactctcagctgcctttttc
ctctacttttataggaacttatgcactcactctggtgggaatttgggcag
gttcacattgaatcagtaaagtttccactgcacaaacccatgtactactt
cttcagcaatatatactccattaatctctgccatcccatggttgttaacc
caaaaatgtttgggaaatttgtgatagaaaacaaccccatctcccaccct
caatacatgactcagctctatttcatcctcagttttgtgactgcaaaatg
ccacttgttagcagcaatttcatatgaacctcatgttgctatatataatc
ctttggtttacaatgtgaccatattctctcagatttacagttccttgatt
tcagaagtacatattactggtgtagtttgtatatcaggtcacacaggcat
caagatctctgtatagcttggtaacataggcgtgatcaaataccatttct
atgttcttacctgacaaaactcccccacttatgttaaagttcttgtttaa
tgattttaactattattttatttaataatctttcatcctattcattcact
cattaagttaaagttctttttttaaacatgtattattaaaattttattat
aataaatgataatggatatttcttctcctctaagcattatagtaaataga
ccctgcttcaagcttctgtcttgagtttctgccttggcttccctcagtag
aatggaccctttgttctcaagttgtttttggtaaatgttttatcagaaag
caagccagaacagctggttttattttttcttctctttgcagataatgtta
ctactgaaaaaagataagttatgaataatatgagcgatcccaaaataggc
ttcaattggagatattttagttgataaatttataaggaattagagaaaat
accctttgctatttatttcatctatatcttgaaggagatggtgtcttcaa
ttttgctcctctaatttttgcttttagaaataaagcaccgtaattggggg
aataatcacattgtagcatggaagaaatttt
gaattcattaaaaataaagttcccatgacacattttattgttccctttat
gagaaagaattgccaaatctgtgttttgaaagtaagaggtaaatttcatc
cctcggtgattttaagaattacatcatccattttgagtgggatgggaaaa
tctttaaagacaaagacaacaaaggcttgagagttgttgctcactgtttc
tgatgtgtagacaacaaacctgtgacaattaggacactagctaaatttag
gatgcatagctagaagaccatggtataacaacgacctaaaagatgaaaag
tagcatcttaagttagggaggcaatagcttaaatggtgagatatgtacag
tcatatttccccctggggtggacggtgaaagaggacaatttcaatatttt
cacactaagaaatgatgtgtgaattatcatatgctggagtcggaggttgg
gacagagataaagtatttgagagttctgtgttacaatgttagatatgaga
acatagttactgacaaagaaaatgaaatgttaggtgggcatctgcatata
tatatatatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_105939755_105940883
seq2: B6Ng01-130J03.b_47_1177

seq1  GAATTCTAACAGGGGATTTGGCAATAGGACAATATTGCATGTTGCATGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAACAGGGGATTTGGCAATAGGACAATATTGCATGTTGCATGAG  50

seq1  TTCATTCTGACTGAATTATCTAAGAAGCTAGACTCTCAGCTGCCTTTTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATTCTGACTGAATTATCTAAGAAGCTAGACTCTCAGCTGCCTTTTTC  100

seq1  CTCTACTTTTATAGGAACTTATGCACTCACTCTGGTGGGAATTTGGGCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTACTTTTATAGGAACTTATGCACTCACTCTGGTGGGAATTTGGGCAG  150

seq1  GTTCACATTGAATCAGTAAAGTTTCCACTGCACAAACCCATGTACTACTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCACATTGAATCAGTAAAGTTTCCACTGCACAAACCCATGTACTACTT  200

seq1  CTTCAGCAATATATACTCCATTAATCTCTGCCATCCCATGGTTGTTAACC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAGCAATATATACTCCATTAATCTCTGCCATCCCATGGTTGTTAACC  250

seq1  CAAAAATGTTTGGGAAATTTGTGATAGAAAACAACCCCATCTCCCACCCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAATGTTTGGGAAATTTGTGATAGAAAACAACCCCATCTCCCACCCT  300

seq1  CAATACATGACTCAGCTCTATTTCATCCTCAGTTTTGTGACTGCAAAATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATACATGACTCAGCTCTATTTCATCCTCAGTTTTGTGACTGCAAAATG  350

seq1  CCACTTGTTAGCAGCAATTTCATATGAACCTCATGTTGCTATATATAATC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTTGTTAGCAGCAATTTCATATGAACCTCATGTTGCTATATATAATC  400

seq1  CTTTGGTTTACAATGTGACCATATTCTCTCAGATTTACAGTTCCTTGATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGGTTTACAATGTGACCATATTCTCTCAGATTTACAGTTCCTTGATT  450

seq1  TCAGAAGTACATATTACTGGTGTAGTTTGTATATCAGGTCACACAGGCAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAAGTACATATTACTGGTGTAGTTTGTATATCAGGTCACACAGGCAT  500

seq1  CAAGATCTCTGTATAGCTTGGTAACATAGGCGTGATCAAATACCATTTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGATCTCTGTATAGCTTGGTAACATAGGCGTGATCAAATACCATTTCT  550

seq1  ATGTTCTTACCTGACAAAACTCCCCCACTTATGTTAAAGTTCTTGTTTAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTCTTACCTGACAAAACTCCCCCACTTATGTTAAAGTTCTTGTTTAA  600

seq1  TGATTTTAACTATTATTTTATTTAATAATCTTTCATCCTATTCATTCACT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTTTAACTATTATTTTATTTAATAATCTTTCATCCTATTCATTCACT  650

seq1  CATTAAGTTAAAGTTCTTTTTTTAAACATGTATTATTAAAATTTTATTAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTAAGTTAAAGTTCTTTTTTTAAACATGTATTATTAAAATTTTATTAT  700

seq1  AATAAATGATAATGGATATTTCTTCTCCTCTAAGCATTATAGTAAATAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAATGATAATGGATATTTCTTCTCCTCTAAGCATTATAGTAAATAGA  750

seq1  CCCTGCTTCAAGCTTCTGTCTTGAGTTTCTGCCTTGGCTTCCCTCAGTAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGCTTCAAGCTTCTGTCTTGAGTTTCTGCCTTGGCTTCCCTCAGTAG  800

seq1  AATGGACCCTTTGTTCTCAAGTTGTTTTTGGTAAATGTTTTATCAGAAAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGACCCTTTGTTCTCAAGTTGTTTTTGGTAAATGTTTTATCAGAAAG  850

seq1  CAAGCCAGAACAGCTGGTTTTATTTTTTCTTCTCTTTGCAGATAATGTTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCCAGAACAGCTGGTTTTATTTTTTCTTCTCTTTGCAGATAATGTTA  900

seq1  CTACTGAAAAAAAGATAAGTTATGAATAATATGAGCGATCCCAAAATAGG  950
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTG-AAAAAAGATAAGTTATGAATAATATGAGCGATCCCAAAATAGG  949

seq1  CTTCAATTGGAGATATTTTAGTTGATAAATTTATAAGGAATTAGAGAAAA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAATTGGAGATATTTTAGTTGATAAATTTATAAGGAATTAGAGAAAA  999

seq1  TACCCTTTGCTATTTATTTCATCTATAATCTTGAAGGAGAT-GTGTC-TC  1048
      |||||||||||||||||||||||||| |||||||||||||| ||||| ||
seq2  TACCCTTTGCTATTTATTTCATCTAT-ATCTTGAAGGAGATGGTGTCTTC  1048

seq1  AATTTTGCT-CTCTAATTTGTGCTTTTAGAAATAAAGCACCGTAATTGGG  1097
      ||||||||| ||||||||| ||||||||||||||||||||||||||| ||
seq2  AATTTTGCTCCTCTAATTTTTGCTTTTAGAAATAAAGCACCGTAATT-GG  1097

seq1  GGGAATTATCACATTGTAGCAT-GAAGAATTTT-  1129
      |||||| ||||||||||||||| |||||| ||| 
seq2  GGGAATAATCACATTGTAGCATGGAAGAAATTTT  1131

seq1: chr10_106124945_106125534
seq2: B6Ng01-130J03.g_67_656 (reverse)

seq1  CACACACACACACACACACACACACACACACATATATATATATATGCAGA  50
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACACACACACACACACACACACACACACATATATATATATATGCAGA  50

seq1  TGCCCACCTAACATTTCATTTTCTTTGTCAGTAACTATGTTCTCATATCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCACCTAACATTTCATTTTCTTTGTCAGTAACTATGTTCTCATATCT  100

seq1  AACATTGTAACACAGAACTCTCAAATACTTTATCTCTGTCCCAACCTCCG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATTGTAACACAGAACTCTCAAATACTTTATCTCTGTCCCAACCTCCG  150

seq1  ACTCCAGCATATGATAATTCACACATCATTTCTTAGTGTGAAAATATTGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCAGCATATGATAATTCACACATCATTTCTTAGTGTGAAAATATTGA  200

seq1  AATTGTCCTCTTTCACCGTCCACCCCAGGGGGAAATATGACTGTACATAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGTCCTCTTTCACCGTCCACCCCAGGGGGAAATATGACTGTACATAT  250

seq1  CTCACCATTTAAGCTATTGCCTCCCTAACTTAAGATGCTACTTTTCATCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACCATTTAAGCTATTGCCTCCCTAACTTAAGATGCTACTTTTCATCT  300

seq1  TTTAGGTCGTTGTTATACCATGGTCTTCTAGCTATGCATCCTAAATTTAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGGTCGTTGTTATACCATGGTCTTCTAGCTATGCATCCTAAATTTAG  350

seq1  CTAGTGTCCTAATTGTCACAGGTTTGTTGTCTACACATCAGAAACAGTGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTGTCCTAATTGTCACAGGTTTGTTGTCTACACATCAGAAACAGTGA  400

seq1  GCAACAACTCTCAAGCCTTTGTTGTCTTTGTCTTTAAAGATTTTCCCATC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACAACTCTCAAGCCTTTGTTGTCTTTGTCTTTAAAGATTTTCCCATC  450

seq1  CCACTCAAAATGGATGATGTAATTCTTAAAATCACCGAGGGATGAAATTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTCAAAATGGATGATGTAATTCTTAAAATCACCGAGGGATGAAATTT  500

seq1  ACCTCTTACTTTCAAAACACAGATTTGGCAATTCTTTCTCATAAAGGGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCTTACTTTCAAAACACAGATTTGGCAATTCTTTCTCATAAAGGGAA  550

seq1  CAATAAAATGTGTCATGGGAACTTTATTTTTAATGAATTC  590
      ||||||||||||||||||||||||||||||||||||||||
seq2  CAATAAAATGTGTCATGGGAACTTTATTTTTAATGAATTC  590