BAC Information

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BAC

Clone NameB6Ng01-130K12
Chromosome3 (Build37)10 (Build37)
Map Location 41,059,051 - 41,059,737118,065,336 - 118,065,901
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC100040882, Intu, Slc25a31, Hspa4l, Plk4, Mfsd8, LOC100039027, LOC100039043, 3110057O12Rik, 1700034I23Rik, Larp2, Pgrmc2
Downstream geneEG666004, Ppia-ps3_337.1, LOC100039115, Phf17, Sclt1, D3Ertd751e, LOC666031
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-130K12.bB6Ng01-130K12.g
ACCDH931916DH931917
length1,004571
definitionDH931916|Mus musculus domesticus DNA, BAC clone: B6Ng01-130K12, 5' end.DH931917|Mus musculus domesticus DNA, BAC clone: B6Ng01-130K12, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(41,059,051 - 41,059,737)(118,065,336 - 118,065,901)
sequence
gaattctttgttcagctctgagccccatattttaagggggctatttgatt
ttctggagtccaccctcttgagttctttatatatattggatattagtccc
ctatctgatttaagataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacggtgtcttttgccttgcagaagctttgcagtttca
tgaggtcccatttgtcaatcctcgatcttaaagcacaagccattgctgtt
ctattcaggaattttttccctgtgcccatatcttcaagacttttccccac
tttctcctctataagtttcagtgtctctggttttatgtggagttccttga
tccacttagatttgaccttagtacaaggagagaggaatgggttgattcac
attcttctacatgataacaaccagttgtgccagcaccatttgttgaaaat
gctgtcttttttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tctacttgtctgtcactataccagtaccatgcagtttttatcacaattgt
tctgtagtaaagctttaggtcaggcatggtgattccaccagaggtacttt
tatccttgagaagagcttttgctatcctaggttttttgttattccagatg
aatttgcagattgctctttctaattcgttgaagaattgagtttggaattt
tgatggggattgcattgaatctgtagattgcttttggcaagatagccatt
tttacaatgttgatcctgccaatccatgagcatgggagatctgctcacat
tctaacttcgaacttctgtgtctccttaagtagttgctgttgtgtgatcc
tattcctgggaagttgtgatacctggctactcatcttaaaaaggaacgca
tgacaagcatagtacaatagtaccagagtctgacttggtgagccagccca
tttt
atttctcgtattggaaacctcaccagtttcccagggctactgaagacatg
gatcttggaggagaatctgttactactatctctttactaaatccacactg
ttcccaactacattctaaacatttgcccttatatccatagataaatgtag
tcttcaggctttatcaaggatgcttctttgcaatggaaagccttacagaa
gaccacgtccaatcaaaatgaagagttctagaacctcagtccagaggatg
cacctacaatatgattaaaccccctaaggcatggggaccgttacagaacg
agtagaaagattggaggagcatcaggaagtttggttcaagattgtgtctc
ctaggaatgccaaaagctatacccgtataggctctttgctggcaggggca
ggtgagaggagagaaccgggtccagccgagtctccaggtctgatccaggt
ggtggatggtaagtgtagcagcacccagaccgatcatgtgtctgtcaaag
caggaacttgttttattgtatcagtcttttgtttatatagggttgaggaa
ggaggtggtgattttgggtga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_41059051_41059737
seq2: B6Ng01-130K12.b_49_736 (reverse)

seq1  ACAAAAAACCTAGGATAGCAAAAACTCTTCTCAAGGATAACAGAACCTCT  50
      ||||||||||||||||||||||| |||||||||||||||| || ||||||
seq2  ACAAAAAACCTAGGATAGCAAAAGCTCTTCTCAAGGATAAAAGTACCTCT  50

seq1  GGTGGAATCACCATGCCTGACCTAAAGCTTTACTACAGAGCAATTGTGAT  100
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  GGTGGAATCACCATGCCTGACCTAAAGCTTTACTACAGAACAATTGTGAT  100

seq1  AAAAACTGCATGGTACTGGTATAGTGACAGACAAGCAGACCAATGGAATA  150
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  AAAAACTGCATGGTACTGGTATAGTGACAGACAAGTAGACCAATGGAATA  150

seq1  GAATTGAAGACTCAGAAACGAATCCACACACCTATGGTCACTTGATCTTC  200
      ||||||||||| |||||| ||| |||||||||||||||||||||||||||
seq2  GAATTGAAGACCCAGAAATGAACCCACACACCTATGGTCACTTGATCTTC  200

seq1  GACAAGGGAGCTAAAACCATCCAGTGGAAAAAAGACAGCATTTTCAACAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAAGGGAGCTAAAACCATCCAGTGGAAAAAAGACAGCATTTTCAACAA  250

seq1  ATGGTGCTGGCACAACTGGTTGTTATCATGTAGAAGAATGCGAATTGATC  300
      |||||||||||||||||||||||||||||||||||||||| ||||  | |
seq2  ATGGTGCTGGCACAACTGGTTGTTATCATGTAGAAGAATGTGAATCAACC  300

seq1  CACTCCTATCTCCTTGTACTAAGGTCAAATCTAAGTGGATCAAGGAACGC  350
      || |||| |||||||||||||||||||||||||||||||||||||||| |
seq2  CATTCCTCTCTCCTTGTACTAAGGTCAAATCTAAGTGGATCAAGGAACTC  350

seq1  CACATAAAACCAGAGACACTGAAACTTATAGAGGAGAAAGTGGGGAAAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATAAAACCAGAGACACTGAAACTTATAGAGGAGAAAGTGGGGAAAAG  400

seq1  CCTTGAAGATATGGTCACAGGGGAAAAATTCCTGCATAGAACAGCAATGG  450
       ||||||||||||| ||||||| ||||||||||| |||||||||||||||
seq2  TCTTGAAGATATGGGCACAGGGAAAAAATTCCTGAATAGAACAGCAATGG  450

seq1  CTTGTGCTGTAAGATTGAGAATAGACAAATGGGACCTCATGAAACTGCAA  500
      |||||||| |||||| ||| || |||||||||||||||||||||||||||
seq2  CTTGTGCTTTAAGATCGAGGATTGACAAATGGGACCTCATGAAACTGCAA  500

seq1  AGCTTCTGCAAGGCAAAAGACACCGTCAATAAGACAAAAAG-GCACCAAC  549
      |||||||||||||||||||||||||||||||||||||||||  |||||||
seq2  AGCTTCTGCAAGGCAAAAGACACCGTCAATAAGACAAAAAGACCACCAAC  550

seq1  AGATTGGGAAAGGATCTTTACCTATCCTAAATCAGATAGGGGACTAATAT  599
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  AGATTGGGAAAGGATCTTTACCTATCTTAAATCAGATAGGGGACTAATAT  600

seq1  CCAATATATATCAAGAACTCAAGAAGGTGGATTCCAGAAAATCAAATAAC  649
      ||||||||||| |||||||||||| |||||| |||||||||||||||| |
seq2  CCAATATATATAAAGAACTCAAGAGGGTGGACTCCAGAAAATCAAATAGC  650

seq1  CCCATTAAAAAATGGGGCTCAGAGCTAAACAAAGAATT  687
      ||| |||||| ||||||||||||||| |||||||||||
seq2  CCCCTTAAAATATGGGGCTCAGAGCTGAACAAAGAATT  688

seq1: chr10_118065336_118065901
seq2: B6Ng01-130K12.g_79_644 (reverse)

seq1  TCACCCAAAATCACCACCTCCTTCCTCAACCCTATATAAACAAAAGACTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCCAAAATCACCACCTCCTTCCTCAACCCTATATAAACAAAAGACTG  50

seq1  ATACAATAAAACAAGTTCCTGCTTTGACAGACACATGATCGGTCTGGGTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAATAAAACAAGTTCCTGCTTTGACAGACACATGATCGGTCTGGGTG  100

seq1  CTGCTACACTTACCATCCACCACCTGGATCAGACCTGGAGACTCGGCTGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTACACTTACCATCCACCACCTGGATCAGACCTGGAGACTCGGCTGG  150

seq1  ACCCGGTTCTCTCCTCTCACCTGCCCCTGCCAGCAAAGAGCCTATACGGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCGGTTCTCTCCTCTCACCTGCCCCTGCCAGCAAAGAGCCTATACGGG  200

seq1  TATAGCTTTTGGCATTCCTAGGAGACACAATCTTGAACCAAACTTCCTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGCTTTTGGCATTCCTAGGAGACACAATCTTGAACCAAACTTCCTGA  250

seq1  TGCTCCTCCAATCTTTCTACTCGTTCTGTAACGGTCCCCATGCCTTAGGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCCTCCAATCTTTCTACTCGTTCTGTAACGGTCCCCATGCCTTAGGG  300

seq1  GGTTTAATCATATTGTAGGTGCATCCTCTGGACTGAGGTTCTAGAACTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTAATCATATTGTAGGTGCATCCTCTGGACTGAGGTTCTAGAACTCT  350

seq1  TCATTTTGATTGGACGTGGTCTTCTGTAAGGCTTTCCATTGCAAAGAAGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTTGATTGGACGTGGTCTTCTGTAAGGCTTTCCATTGCAAAGAAGC  400

seq1  ATCCTTGATAAAGCCTGAAGACTACATTTATCTATGGATATAAGGGCAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTTGATAAAGCCTGAAGACTACATTTATCTATGGATATAAGGGCAAA  450

seq1  TGTTTAGAATGTAGTTGGGAACAGTGTGGATTTAGTAAAGAGATAGTAGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTAGAATGTAGTTGGGAACAGTGTGGATTTAGTAAAGAGATAGTAGT  500

seq1  AACAGATTCTCCTCCAAGATCCATGTCTTCAGTAGCCCTGGGAAACTGGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGATTCTCCTCCAAGATCCATGTCTTCAGTAGCCCTGGGAAACTGGT  550

seq1  GAGGTTTCCAATACGA  566
      ||||||||||||||||
seq2  GAGGTTTCCAATACGA  566