BAC Information

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BAC

Clone NameB6Ng01-130K22
Chromosome10 (Build37)
Map Location 41,550,809 - 41,551,879
singlet/doubletsinglet
Overlap genenone
Upstream geneCdc40, Wasf1, Gpr6, A530089I17Rik, LOC633979, Zbtb24, Mical1, Smpd2, Ppil6, Cd164, 5033413D22Rik, EG629461, 2410017P07Rik
Downstream geneSesn1, Armc2, 1700016J18Rik, LOC624784, Foxo3a, Lace1, LOC666540, Snx3, Nr2e1, c222389, Ostm1, Sec63
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-130K22.bB6Ng01-130K22.g
ACCDH931936DH931937
length1,0711,123
definitionDH931936|Mus musculus domesticus DNA, BAC clone: B6Ng01-130K22, 5' end.DH931937|Mus musculus domesticus DNA, BAC clone: B6Ng01-130K22, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcacctaatggcccaggatgctcttcaacttctgaccttccttcct
gtacccacccccaagtgttaggatgttgggcatgtaccaccacacccaac
ttctcaatttttttatggagggtactctttgaaaaattgatacacttggg
ttttcccccaaaagtacatgcaagaatacactgttttctctgtaactgat
gggtcacacaacatcctaaaaagccaaaatcttcaatttgaaccattaag
ctgtagcctctcccagaacaagtcttggctttgcttcctggaaaacaaga
acaagtctcctttggtaatcagtttggggcagttaagactgcccactact
ctctgcagagaatgtgaggtccattctcagatcccatgtcagcacactca
caaccactatacgcatgtgcacacagacagacagacagacagatgtgcat
gtgcacacacatatatatacatagagcgagagacagggatgggggagaga
atgtttgctttactggtttcatgttctcatcttcccagaaactactctcc
aaggagcacatatgcgttgagcccaactgtgtacctgcccagctggatgg
tctagtcagatcatctacctctccagctcacgctccttgtgttgagtgac
tggataaaagcagcgagtgcatgccacaggcccaagaacagcatctgggg
gggggggcgagttaactagactatgggctctgaggtcagcagtcttctcc
acctctcttccacacagatacctgtgcaggtacctggaacagtctgagac
agtaagtgaaagaggagatcaatactatcaccagttaagctttggatatt
taaacttggaattatctcctttctcctttagactctctctaaaagagaca
ctgaaacacaatgttcttaagttgtacacacatcttcttcttgaggccta
cagcatcaaattgatgacaaactagacttgagtttgagtagaggtgcacc
tagttgctcacagcagctactgcctgaaaacctcaggaattgtctttgtt
gaacaagggaggcaggcgggg
gaattctcattacagtcatgtatggcagactacattacataatagaagaa
agttggtgggctcctctggtaaatggaggttccccacaaacacttagaat
aacagctgagtcactcctagatgcaggaatttacaatggtctaggaagaa
ggtgggttgtggtttaagaaggaactagagtatcttgttattcacagaaa
ggttagcaagaaagggacctccctagtgcatacttccaaaaatagcatag
ctaggtatttactaagggacccctggtggtgggttacacaatagactaga
attgtggctagggtgtgaagcccttgtacctggagcataaagccctcaca
actggcttctaagaatagctgactttaggtagggctgattttatctcagt
tgtaaccactgcctggttcctgctgcttttatgtatgcatttttctgttt
tgtgtaaagaatcattatgcataggatgacttcagtgaattttggctgat
gtatcacctaactaccttgttttcttcggtaatgactatataagcctgat
gctcactttgagaaattatactcagattcagcactctcttgtgttcctgt
ctgtttgtcactccttgcccacctgagtacaggaaccttgattctccccg
ggttgagggaccctgactgggtctgcccatggcattccaccaaccaaaag
gctaaaaacaccaccagatagcaatcaagacatatagctgagatttcccc
caagctgtaacttgcctaccagtgtatttgaaagtgtcttgatttgtgac
ttttctttgttgtgttactatgagaactttatgatgtcattaccatgttg
gaacagggaacttgcgagaccctgactttgtgctcctgggccatggtcac
gcacatcgagctccataagaaactataccttagtcccttccaggtgaatg
ctgtgagatttgcacagtgaccctggaatgagcctctgatagccagccag
agacatcttccctcatttggaataataataattaattcacatccaaaaag
ttagtctcactccagcagaagaaagcaaagaaaatctccacttataatta
tataaacatctcgaaaaataatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_41550809_41551879
seq2: B6Ng01-130K22.b_47_1116 (reverse)

seq1  CCCGCCTGCCT-CCTTGTTCACCAAGGACATTTCCTGA-GTTCTCA-GCA  47
      ||||||||||| ||||||||| ||| |||| ||||||| ||| ||| |||
seq2  CCCGCCTGCCTCCCTTGTTCAACAAAGACAATTCCTGAGGTTTTCAGGCA  50

seq1  GTTAGCTGCTGTGAGC-ACTAGGTGGCACTCTGACTC-AACTCAAGTCTA  95
      | |||||||||||||| ||||||||   |||| |||| ||||||||||||
seq2  G-TAGCTGCTGTGAGCAACTAGGTGCACCTCT-ACTCAAACTCAAGTCTA  98

seq1  GTTTGTCATCAATTTTGATGCTGTAGGCCTCAAG-AGAAGATGTGTGTAC  144
      |||||||||||| ||||||||||||||||||||| |||||||||||||||
seq2  GTTTGTCATCAA-TTTGATGCTGTAGGCCTCAAGAAGAAGATGTGTGTAC  147

seq1  AACTTAAGAACATTTGTGTTTTCAGTTGTCTTCTTTTAGAGGGAGTCTGA  194
      |||||||||||| ||||| |||||| |||| |||||||||| |||||| |
seq2  AACTTAAGAACA-TTGTG-TTTCAG-TGTC-TCTTTTAGAGAGAGTCT-A  192

seq1  AAGGAGAAAGGAGATAATTCCAAGTTTAAATATCC-AAGCTTAACTGGTG  243
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  AAGGAGAAAGGAGATAATTCCAAGTTTAAATATCCAAAGCTTAACTGGTG  242

seq1  ATAGTATTGATCTCCTCTTTCACTTACTGTCTCAGACTGTTCCAGGTACC  293
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTATTGATCTCCTCTTTCACTTACTGTCTCAGACTGTTCCAGGTACC  292

seq1  TGCACAGGTATCTGTGTGGAAGAGAGGTGGAGAAGACTGCTGACCTCAGA  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACAGGTATCTGTGTGGAAGAGAGGTGGAGAAGACTGCTGACCTCAGA  342

seq1  GCCCATAGTCTAGTTAACTCGCCCCCCCCCCCAGATGCTGTTCTTGGGCC  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCATAGTCTAGTTAACTCGCCCCCCCCCCCAGATGCTGTTCTTGGGCC  392

seq1  TGTGGCATGCACTCGCTGCTTTTATCCAGTCACTCAACACAAGGAGCGTG  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGCATGCACTCGCTGCTTTTATCCAGTCACTCAACACAAGGAGCGTG  442

seq1  AGCTGGAGAGGTAGATGATCTGACTAGACCATCCAGCTGGGCAGGTACAC  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGGAGAGGTAGATGATCTGACTAGACCATCCAGCTGGGCAGGTACAC  492

seq1  AGTTGGGCTCAACGCATATGTGCTCCTTGGAGAGTAGTTTCTGGGAAGAT  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGGGCTCAACGCATATGTGCTCCTTGGAGAGTAGTTTCTGGGAAGAT  542

seq1  GAGAACATGAAACCAGTAAAGCAAACATTCTCTCCCCCATCCCTGTCTCT  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAACATGAAACCAGTAAAGCAAACATTCTCTCCCCCATCCCTGTCTCT  592

seq1  CGCTCTATGTATATATATGTGTGTGCACATGCACATCTGTCTGTCTGTCT  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCTCTATGTATATATATGTGTGTGCACATGCACATCTGTCTGTCTGTCT  642

seq1  GTCTGTGTGCACATGCGTATAGTGGTTGTGAGTGTGCTGACATGGGATCT  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGTGTGCACATGCGTATAGTGGTTGTGAGTGTGCTGACATGGGATCT  692

seq1  GAGAATGGACCTCACATTCTCTGCAGAGAGTAGTGGGCAGTCTTAACTGC  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAATGGACCTCACATTCTCTGCAGAGAGTAGTGGGCAGTCTTAACTGC  742

seq1  CCCAAACTGATTACCAAAGGAGACTTGTTCTTGTTTTCCAGGAAGCAAAG  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAAACTGATTACCAAAGGAGACTTGTTCTTGTTTTCCAGGAAGCAAAG  792

seq1  CCAAGACTTGTTCTGGGAGAGGCTACAGCTTAATGGTTCAAATTGAAGAT  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGACTTGTTCTGGGAGAGGCTACAGCTTAATGGTTCAAATTGAAGAT  842

seq1  TTTGGCTTTTTAGGATGTTGTGTGACCCATCAGTTACAGAGAAAACAGTG  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGCTTTTTAGGATGTTGTGTGACCCATCAGTTACAGAGAAAACAGTG  892

seq1  TATTCTTGCATGTACTTTTGGGGGAAAACCCAAGTGTATCAATTTTTCAA  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCTTGCATGTACTTTTGGGGGAAAACCCAAGTGTATCAATTTTTCAA  942

seq1  AGAGTACCCTCCATAAAAAAATTGAGAAGTTGGGTGTGGTGGTACATGCC  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTACCCTCCATAAAAAAATTGAGAAGTTGGGTGTGGTGGTACATGCC  992

seq1  CAACATCCTAACACTTGGGGGTGGGTACAGGAAGGAAGGTCAGAAGTTGA  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACATCCTAACACTTGGGGGTGGGTACAGGAAGGAAGGTCAGAAGTTGA  1042

seq1  AGAGCATCCTGGGCCATTAGGTGAATTC  1071
      ||||||||||||||||||||||||||||
seq2  AGAGCATCCTGGGCCATTAGGTGAATTC  1070