BAC Information

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BAC

Clone NameB6Ng01-131B12
Chromosome10 (Build37)
Map Location 97,031,903 - 97,033,099
singlet/doubletsinglet
Overlap geneLum
Upstream geneBtg1, LOC628256, 4930556N09Rik, EG667407, Dcn
Downstream geneKera, Epyc, 4921510H08Rik, EG667438
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-131B12.bB6Ng01-131B12.g
ACCDH932240DH932241
length1,1961,195
definitionDH932240|Mus musculus domesticus DNA, BAC clone: B6Ng01-131B12, 5' end.DH932241|Mus musculus domesticus DNA, BAC clone: B6Ng01-131B12, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctatctcagtcatacacggaattgttcctagcctttccttagagt
gtcgagaccaagagctactaaagccataaaattgttcatttaatctatta
gtattatttgaggctaactgacagtgatgtctctcttaatatttttcagt
tattgcttagtttgttccttgcgtagaattgtgtgctgccttttactaag
tggcatgatccagtagaggaaaggaagaaaaccttcagaaggcatgcgtg
cagtaagaacaggctaccaagcatcctaccacttgcctgactcagagcaa
acacatatggccctatcttccctaacatctggaggttcactatatgaccc
tattaacatggccagcaccaccactctttttctgacacagtgtatgtggt
cctcaaacaaattcatgaggaaaggtgttgaaaaaggttttaagtatcta
tttatttaaaagatatccttatagagcccttagcttttgtacagcccttc
acttcacccacgtcacacatggttcttttcatgtgctgatgtattttatt
ttgatttatctccatgatggatctggacttgatctgctctttgaaggctt
ccatcctcttcagcttcagttcagaagatatgaaaacaggcaggaaatga
caccattcaatcacaaccttaccatttaatagagtttagcacagaaatgt
gtcagttcaccaatgtgtgaaaatttcaggtggaaaacataattttacat
ataaagcagtcattgtctattcaaattgaacttgtttatctaatgaaaag
ttcacctcccttgccaagataaaaatattgctatcagaaaaaaatgaagt
aggacattgtgacaacattgaaatgtttctttaatttcatgtatctccta
ggttacacattttcatgaaggagaatgtgattgcctatataaacaccatt
ttttcatttcattttgaaatggatttttaaatccatgaaagcaagtttgg
gacaagtttggactgttacagtcaccagagttcagaactagcacaattct
actggcacactgtttaatagtgtaaagtttaatatggtgatagttcatat
tctttaatttttaagtaatgaatttcatttatttatttgcaattatctag
ccctaaattcaggtctcacttgaacattccagttaaaatgaactta
gaattcccagtacccatgtggcaactcacagtcctctgtaactccactcc
caaagggttagatactcccccttctgcctctgtgggcactgattgcaatg
gaaaaaaaaagatatacatgaaggttcaaaacccattcatgggaaggtat
aattcattcttttaaaaagcagaaaaagatcttggtccaggacccgccga
acttaggaaattagtctgaacaggtgagagggtgcgccagagaacctgac
agcttctggaacaggcagaagcacagaggcgctgaggcagcaccctgtgt
gggccggggacagccggccaccttccggaccggaggacaggtgcccaccc
ggctggggaggcggcctaagccacagcagcagcggtcgccatcttggtcc
tgggactccaaggaacttaggaatttagtctgcttaggtgagagtctgta
ccacctgggaactgccaaagcaacacagtgtctgagaaaggtcctgtttt
gggccttcttcttcggccaggaggaggcccaaatacaagatatctgcgca
ccttccctgtaagagagcttgccagcagagagtgctctgagcactgaaac
tcagaggagagaatctgtctcccaggtctgctgatagacggtaacagaat
caccagaagaacaatctctaaacagagtcaactataactactaactccag
agattaccagatggcgaaaggtaaacggaggaatctttactaacaggaac
caagaccactcaccatcaccagaacccagcacacccactttcgcccagtc
caggtaaccccaacacacctgagaacctagacctagatttaaaagcatat
ctcattgatgatggtagaggacatcaagaaagacttttataaatcactta
aagaaatacaggagaacactgctaaagagttacaggtccttaaagaaaac
aggaaaacacatcaaacaggtagatgtccttacgaaaagaggaaaaacat
acaactgggtgatgggaatgacaaaccctactagacctaaaagggaggta
gaccccataagaaaactcaagcgaggcatctctgagatgaaaccttagta
agaatctgggaccttagattgaacttcgcacggaatcaagaacgtaagag
agattccagtgcagaaatccttagagatctcgtcccacatctcag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_97031903_97033099
seq2: B6Ng01-131B12.b_45_1240

seq1  GAATTCTATCTCAGTCATACACGGAATTGTTCCTAGCCTTTCCTTAGAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATCTCAGTCATACACGGAATTGTTCCTAGCCTTTCCTTAGAGT  50

seq1  GTCGAGACCAAGAGCTACTAAAGCCATAAAATTGTTCATTTAATCTATTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCGAGACCAAGAGCTACTAAAGCCATAAAATTGTTCATTTAATCTATTA  100

seq1  GTATTATTTGAGGCTAACTGACAGTGATGTCTCTCTTAATATTTTTCAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTATTTGAGGCTAACTGACAGTGATGTCTCTCTTAATATTTTTCAGT  150

seq1  TATTGCTTAGTTTGTTCCTTGCGTAGAATTGTGTGCTGCCTTTTACTAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGCTTAGTTTGTTCCTTGCGTAGAATTGTGTGCTGCCTTTTACTAAG  200

seq1  TGGCATGATCCAGTAGAGGAAAGGAAGAAAACCTTCAGAAGGCATGCGTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCATGATCCAGTAGAGGAAAGGAAGAAAACCTTCAGAAGGCATGCGTG  250

seq1  CAGTAAGAACAGGCTACCAAGCATCCTACCACTTGCCTGACTCAGAGCAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTAAGAACAGGCTACCAAGCATCCTACCACTTGCCTGACTCAGAGCAA  300

seq1  ACACATATGGCCCTATCTTCCCTAACATCTGGAGGTTCACTATATGACCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACATATGGCCCTATCTTCCCTAACATCTGGAGGTTCACTATATGACCC  350

seq1  TATTAACATGGCCAGCACCACCACTCTTTTTCTGACACAGTGTATGTGGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAACATGGCCAGCACCACCACTCTTTTTCTGACACAGTGTATGTGGT  400

seq1  CCTCAAACAAATTCATGAGGAAAGGTGTTGAAAAAGGTTTTAAGTATCTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAAACAAATTCATGAGGAAAGGTGTTGAAAAAGGTTTTAAGTATCTA  450

seq1  TTTATTTAAAAGATATCCTTATAGAGCCCTTAGCTTTTGTACAGCCCTTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTTAAAAGATATCCTTATAGAGCCCTTAGCTTTTGTACAGCCCTTC  500

seq1  ACTTCACCCACGTCACACATGGTTCTTTTCATGTGCTGATGTATTTTATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCACCCACGTCACACATGGTTCTTTTCATGTGCTGATGTATTTTATT  550

seq1  TTGATTTATCTCCATGATGGATCTGGACTTGATCTGCTCTTTGAAGGCTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATTTATCTCCATGATGGATCTGGACTTGATCTGCTCTTTGAAGGCTT  600

seq1  CCATCCTCTTCAGCTTCAGTTCAGAAGATATGAAAACAGGCAGGAAATGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCCTCTTCAGCTTCAGTTCAGAAGATATGAAAACAGGCAGGAAATGA  650

seq1  CACCATTCAATCACAACCTTACCATTTAATAGAGTTTAGCACAGAAATGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCATTCAATCACAACCTTACCATTTAATAGAGTTTAGCACAGAAATGT  700

seq1  GTCAGTTCACCAATGTGTGAAAATTTCAGGTGGAAAACATAATTTTACAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGTTCACCAATGTGTGAAAATTTCAGGTGGAAAACATAATTTTACAT  750

seq1  ATAAAGCAGTCATTGTCTATTCAAATTGAACTTGTTTATCTAATGAAAAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAGCAGTCATTGTCTATTCAAATTGAACTTGTTTATCTAATGAAAAG  800

seq1  TTCACCTCCCTTGCCAAGATAAAAATATTGCTATCAGAAAAAAATGAAGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACCTCCCTTGCCAAGATAAAAATATTGCTATCAGAAAAAAATGAAGT  850

seq1  AGGACATTGTGACAACATTGAAATGTTTCTTTAATTTCATGTATCTCCTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACATTGTGACAACATTGAAATGTTTCTTTAATTTCATGTATCTCCTA  900

seq1  GGTTACACATTTTCATGAAGGAGAATGTGATTGCCTATATAAACACCATT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTACACATTTTCATGAAGGAGAATGTGATTGCCTATATAAACACCATT  950

seq1  TTTTCAATTTCATTTTGAAATGGATTTTTAAATCCATGAAAGCAAGGTTT  1000
      ||||| ||||||||||||||||||||||||||||||||||||||| ||||
seq2  TTTTC-ATTTCATTTTGAAATGGATTTTTAAATCCATGAAAGCAA-GTTT  998

seq1  GGGAC-AGTTT-GACTGTTACAAGTCA-CAGAGTTCAG-ACTAGCACAAT  1046
      ||||| ||||| ||||||||| ||||| |||||||||| |||||||||||
seq2  GGGACAAGTTTGGACTGTTAC-AGTCACCAGAGTTCAGAACTAGCACAAT  1047

seq1  TCTACTGGCACAACTGTTT-ATAGTGTAAAGTTTAATAT-GTGATAGTTC  1094
      ||||||||||| ||||||| ||||||||||||||||||| ||||||||||
seq2  TCTACTGGCAC-ACTGTTTAATAGTGTAAAGTTTAATATGGTGATAGTTC  1096

seq1  ATATTCTTTAATTTTTCTAAGTAATG-ATTTCATTTA-TTATTTGCAATT  1142
      |||||||||||||||  ||||||||| |||||||||| ||||||||||||
seq2  ATATTCTTTAATTTT--TAAGTAATGAATTTCATTTATTTATTTGCAATT  1144

seq1  ATCTCAGCCTAAA-TCAGGTTCTCAACATTGAACATTACATGTAAAAATG  1191
      ||||   |||||| ||||| |||||   ||||||||| || || ||||||
seq2  ATCTAGCCCTAAATTCAGG-TCTCA--CTTGAACATTCCA-GTTAAAATG  1190

seq1  AACTTA  1197
      ||||||
seq2  AACTTA  1196