BAC Information

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BAC

Clone NameB6Ng01-131E19
Chromosome10 (Build37)
Map Location 104,053,903 - 104,054,363
singlet/doubletsinglet
Overlap genenone
Upstream geneEG627488, EG667692, EG667695, LOC100043292
Downstream geneLOC100042383, Tmtc2, EG627573
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-131E19.bB6Ng01-131E19.g
ACCDH932391DH932392
length1,230996
definitionDH932391|Mus musculus domesticus DNA, BAC clone: B6Ng01-131E19, 5' end.DH932392|Mus musculus domesticus DNA, BAC clone: B6Ng01-131E19, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcattgatatgggagaagacttctgaacagaacaaccatagcacaa
gcaataagaacaactaataaatgaacctcatgaaactgaaaagcctctgt
attgcaaaggaacataatttggagaaagttgaagattatagaatgggaaa
tcatttagctatttaaacatccaatggtgggctcatctatgaactatata
agtaaataaaactagaaatgagaaaactctgaacatcaagaacttatata
cccaattaaagtgtgggcaaagtaattctaaacagagaatttaaaaaaca
aggaagaatgaatggctgaaaaaattaaaaagcaatgtttaacatcctta
gtaatctgagaaatgcaaatcaaaactattttgaaatttcatcttacacc
tgtctgaatagctaaggtcaacgaaacaaatcaaagtttataatataaaa
actgtggagtatggtgatcactcctgcacttctggtcccaatgctaactt
gtacagccattgtggaaattcaatgtaccatttcctcagaaagatgagaa
ttgagctagctcaagacctagctataacacacttgcacatatacccaaaa
gattctttatcctactatattcatatttattgatgctctattcataatat
ccagaagttgaaaaatagcataaatgtcccttgatagaagaatggataaa
gaaaatgtggtacatttacactatgggatactactccactgtttaataat
atgcattcattattttacaggcaaatgaatgagctagagcaaatcatcct
acgtgaggcaacccaaaccccaaaaccaaatgtattacttattcccttat
atatggatgccagcagactacaattcatatgatcacagggaataggtata
cagtaagggtcaagcaaggagagatggatctccctaggagatagatacac
tgttgtacatggatgaggggggcgattgaatagagattcaactcagagag
gggaataaagtgagcattgaaaacagagaagtacagctaaacaggtcatt
tgagacctatgaactatatagtaagcctccataatatttatataatatat
gcatgtaatgaatgcataaaaacaaagataaggcccaatggaaatcttct
cacaattagctccaatttggtaagtaattaactgtctcgctaggcatgga
atcctcaacaagtatggtcagctatgtgtg

gaattctcacctgaggaatacagaatggctgagaagcacctgaaaaaatg
tccaacgtccttaaccatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtaagaatggttaggatcaaaaattcaggtgacagc
agatgctggcaaggatgtggagaaagaggaacattcctccaatttttgtg
ggattgcaagcttgtacaaccactctggaaaacagtctggcggttcctca
gaaaattggacatagtactactggaggatcccgcaatacctcttctggca
tatatccagaagttattccaactggtaagaaggacacatggtccactatg
ttcatagcagccttatttataatagccagaagctggaaataacccagatg
cccctcaacagaggaatggatacagaaaatgtggtacatctacacaatgg
agtactactcagctattaaaaagaataaaattatgaaattcctagccaaa
tggatggacctggaggtcatcatcctgagtgaggtaacccaatcacaaag
gaactcacacaatatgtattcactgataagtggatattagcccagaaact
taggatacccaagatataagattcaatttgctaaacacatgaaactcaag
aagaacgaagaacaaagtgtggacactttgcgccttcttagaattgggaa
caaaacacccatggaaggagttagagagacacaatttggagctgagacga
aagcatggaccacctagagtctgccatatccatggatccatgcatgactg
tgaacattaccaacaggacataatgaaagcctagagaatgagaaatatat
taaccaacccacatctgatagaggactaatatccaaatttagagagactc
gggaattaggcatcaataaacaagtacccatttaaaatggagtactgagc
aaaacagaattctcatcagagggatctcaaataggtgagagacact
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_104053903_104054363
seq2: B6Ng01-131E19.g_69_538 (reverse)

seq1  TTTAATAG----------CTCCATTGTGTAAATGTACCACATTTTCTGTA  40
      ||||||||          |||||||||||| |||||||||||||||||||
seq2  TTTAATAGCTGAGTAGTACTCCATTGTGTAGATGTACCACATTTTCTGTA  50

seq1  TCTATTCCTCTGTTGAGGGGCATCTGGGTTCTTTCCAGCTCCTGGCTATT  90
      || ||||||||||||||||||||||||||| ||||||||| |||||||||
seq2  TCCATTCCTCTGTTGAGGGGCATCTGGGTTATTTCCAGCTTCTGGCTATT  100

seq1  ATAAATAAGGCTGCTATGAATATAGTGGAGCATGTGTCCTTCTTACCGGT  140
      |||||||||||||||||||| |||||||| ||||||||||||||||| ||
seq2  ATAAATAAGGCTGCTATGAACATAGTGGACCATGTGTCCTTCTTACCAGT  150

seq1  TGGGGCATCTTCTGGATATATGCCCAGAAGAGGTATTGCTGGATCCTCCG  190
      |||   | |||||||||||||| |||||||||||||||| ||||||||| 
seq2  TGGAATAACTTCTGGATATATG-CCAGAAGAGGTATTGCGGGATCCTCCA  199

seq1  GTAGTACTATGTCCAATTTTCTGACGAACCGCCAGACGGATTTCCAGAGT  240
      |||||||||||||||||||||||| |||||||||||| | ||||||||||
seq2  GTAGTACTATGTCCAATTTTCTGAGGAACCGCCAGACTGTTTTCCAGAGT  249

seq1  GGTTGTACAAGCCTGCAATCCCACCAACAATGGAGGAGTGTTCCTCTTTC  290
      |||||||||||| ||||||||||| || | ||||||| ||||||||||||
seq2  GGTTGTACAAGCTTGCAATCCCACAAAAATTGGAGGAATGTTCCTCTTTC  299

seq1  TCCACATCCTCGCCAGCATCTGCTGTCACCTGAATTTTTGATCTTAGCCA  340
      |||||||||| |||||||||||||||||||||||||||||||| || |||
seq2  TCCACATCCTTGCCAGCATCTGCTGTCACCTGAATTTTTGATCCTAACCA  349

seq1  TTCTGACTGGTGTGAGGTGGAATCTCAGGGTTGTTTTGATTTGCATTTCC  390
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTACTGGTGTGAGGTGGAATCTCAGGGTTGTTTTGATTTGCATTTCC  399

seq1  CTGATGATTAAGGATGTTGAACATTTTTTCAGGTGCTTCTCTGCCATTCG  440
      |||||| ||||||| |||| ||||||||||||||||||||| ||||||| 
seq2  CTGATGGTTAAGGACGTTGGACATTTTTTCAGGTGCTTCTCAGCCATTCT  449

seq1  GTATTCCTCAGGTGAGAATTC  461
      |||||||||||||||||||||
seq2  GTATTCCTCAGGTGAGAATTC  470


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