BAC Information

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BAC

Clone NameB6Ng01-131G10
Chromosome10 (Build37)
Map Location 94,330,750 - 94,349,435
singlet/doubletdoublet
Overlap genePlxnc1
Upstream geneMetap2, Vezt, Fgd6, Nr2c1, Ndufa12, EG215472, LOC100041955, Tmcc3, EG667315, 4921537D05Rik
Downstream geneCradd, Socs2, LOC100042004, D10Ertd322e, Ube2n, Nudt4, EG628119
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-131G10.bB6Ng01-131G10.g
ACCDH932466DH932467
length1,1161,128
definitionDH932466|Mus musculus domesticus DNA, BAC clone: B6Ng01-131G10, 5' end.DH932467|Mus musculus domesticus DNA, BAC clone: B6Ng01-131G10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(94,330,750 - 94,331,891)(94,348,289 - 94,349,435)
sequence
gaattccacccagcattctgctcacgcaaagtgggcttatgtgaaatgat
aatcttttgttttaaagacaaggaggtctggagggctgacacgacctctc
ggcaggagcatctgcacagacacttgacgcatgttagtggaacgcacaca
tggccatttagtactgagggactcccagcgaaaatgcattcccatagaac
tgacaagggcccagggagggtgcccaagaagtcaggttttactgagcacc
aaccgtgcacaacatgttggaaatttcccagggaaatgaatattcacagc
ctctcctctggaagcacttacagttctagaggaggtaaaatagccaaggt
gaagaagaaacagaagtcaaggggataccatgttgtgcggaggttgaact
ccatgtagaatttaggtacaagacagaggtgcttctggaaaaccaaaggt
gtggcagagagactaggaaggtgtatgggagaggtgacctttctccactg
tttcaaagtatatggaaaacaagacttgacaggagaggtaagaccagccc
aaataggccaggaatgtagacatgatggatcatgtctagaaatgtgtgtg
tgtgtgtgtgtgtgtacacatatatatgttctaacactgaggaggctaaa
gcaggaggatttgctacatatacagagagagacagagacagagagacaga
gacagagaggcagagagagacagatagagaacccacaaactaagtttcat
ccattgctttagacagctgagcacaaagaatagatacctgagcttgttgc
attcagccaagctttctaagtctgtcttggatacttagagtgatatttta
tacgtgagcaagatctgcatctttaatgacccaatttcaccagaagtgca
tttgaaagacagtacagtggtgacaaagtagaaaactgatgcagttttaa
agtatctagatccagtgatttcagggacatttttagcttgtgactctggc
tttgtttatcagtcctctgaggagaagctcactgagcctctagctgctgt
tgttatcacattttatttggactcaatcgatttgataatttcatgaggtg
gagctcagagtagtta
gaattctgtgtcttttttgacatcctcttctcccagggaatgacacagcc
agagatgtttcaccagagtcaagtgcccagtcataactatcccagtttct
taagaaataaatctttattttttttataaatatatgagtctgggtcttct
gccaaagctgcacagatccttggaagagggggagcacatgccccagcata
agcaatgaacacatacacaaacatacaaagaacacacacacaaacataca
atgaacacatacacacaaacatacaaagaacacacacacaaacatacaaa
gaacacatacacaaacatacaacaaacacatacacaaacatataaagaac
acatacacaaacatacaaagaacacatacacaaacatacaacgaacacat
atacaaacacacaaagaacacatacacaaacatacaacgaacacatacac
acccctgacattttctccagaacacacttgggctaagatgactccagttt
ccctcctattcaaaatggcctggcaaagtggaacgaaaaccagttaagag
atctaggaatttggctgacaagagagcttgcttgtaatcctagcccttgg
gaggtggaggcagaaggatgagacacttgaagccatctttgccctcctac
attgtgattttgaggccaccttggtctacatgagaccctgtggaggatgg
agacagaaactggagaaggagaacctgcccatcgagtggtcaagtggctc
atcaatcgccaagtggaatgatattttcatgtcattccgggaatggcttg
agaatttatccatttggccatttccttgatgggtccacaagaataagaac
gatttgtttcaacagaaatcatcccaaaccccctggttttgtttactaag
atgtggaaagcgctgagctctgctcccctccttgagaatgcgaatgtgtg
ggtaatgtgctgtcgagatttacatctgcatatttgagaagtaataagat
actgtgttgtgacatctggtatacatacttggggtgtggtttgcttttta
tcctcattttattgttcactgggaggcaaagaatgaaagttagaaaatat
ccgaattggctttctcttataccaaaca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_94330750_94331891
seq2: B6Ng01-131G10.b_47_1162

seq1  GAATTCCACCCAGCATTCTGCTCACGCAAAGTGGGCTTATGTGAAATGAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCACCCAGCATTCTGCTCACGCAAAGTGGGCTTATGTGAAATGAT  50

seq1  AATCTTTTGTTTTAAAGACAAGGAGGTCTGGAGGGCTGACACGACCTCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTTTTGTTTTAAAGACAAGGAGGTCTGGAGGGCTGACACGACCTCTC  100

seq1  GGCAGGAGCATCTGCACAGACACTTGACGCATGTTAGTGGAACGCACACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGGAGCATCTGCACAGACACTTGACGCATGTTAGTGGAACGCACACA  150

seq1  TGGCCATTTAGTACTGAGGGACTCCCAGCGAAAATGCATTCCCATAGAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCATTTAGTACTGAGGGACTCCCAGCGAAAATGCATTCCCATAGAAC  200

seq1  TGACAAGGGCCCAGGGAGGGTGCCCAAGAAGTCAGGTTTTACTGAGCACC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAAGGGCCCAGGGAGGGTGCCCAAGAAGTCAGGTTTTACTGAGCACC  250

seq1  AACCGTGCACAACATGTTGGAAATTTCCCAGGGAAATGAATATTCACAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCGTGCACAACATGTTGGAAATTTCCCAGGGAAATGAATATTCACAGC  300

seq1  CTCTCCTCTGGAAGCACTTACAGTTCTAGAGGAGGTAAAATAGCCAAGGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCCTCTGGAAGCACTTACAGTTCTAGAGGAGGTAAAATAGCCAAGGT  350

seq1  GAAGAAGAAACAGAAGTCAAGGGGATACCATGTTGTGCGGAGGTTGAACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAAGAAACAGAAGTCAAGGGGATACCATGTTGTGCGGAGGTTGAACT  400

seq1  CCATGTAGAATTTAGGTACAAGACAGAGGTGCTTCTGGAAAACCAAAGGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGTAGAATTTAGGTACAAGACAGAGGTGCTTCTGGAAAACCAAAGGT  450

seq1  GTGGCAGAGAGACTAGGAAGGTGTATGGGAGAGGTGACCTTTCTCCACTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCAGAGAGACTAGGAAGGTGTATGGGAGAGGTGACCTTTCTCCACTG  500

seq1  TTTCAAAGTATATGGAAAACAAGACTTGACAGGAGAGGTAAGACCAGCCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAAAGTATATGGAAAACAAGACTTGACAGGAGAGGTAAGACCAGCCC  550

seq1  AAATAGGCCAGGAATGTAGACATGATGGATCATGTCTAGAAATGTGTGTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAGGCCAGGAATGTAGACATGATGGATCATGTCTAGAAATGTGTGTG  600

seq1  TGTGTGTGTGTGTGTACACATATATATGTTCTAACACTGAGGAGGCTAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGTGTGTACACATATATATGTTCTAACACTGAGGAGGCTAAA  650

seq1  GCAGGAGGATTTGCTACATATACAGAGAGAGACAGAGACAGAGAGACAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGAGGATTTGCTACATATACAGAGAGAGACAGAGACAGAGAGACAGA  700

seq1  GACAGAGAGGCAGAGAGAGACAGATAGAGAACCCACAAACTAAGTTTCAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGAGAGGCAGAGAGAGACAGATAGAGAACCCACAAACTAAGTTTCAT  750

seq1  CCATTGCTTTAGACAGCTGAGCACAAAGAATAGATACCTGAGCTTGTTGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTGCTTTAGACAGCTGAGCACAAAGAATAGATACCTGAGCTTGTTGC  800

seq1  ATTCAGCCAAGCTTTCTAAGTCTGTCTTGGATACTTAGAGTGATATTTTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAGCCAAGCTTTCTAAGTCTGTCTTGGATACTTAGAGTGATATTTTA  850

seq1  TACGTGAGCAAGATCTGCATCTTTAATGACCCAATTTCACCAGAAGTGCA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACGTGAGCAAGATCTGCATCTTTAATGACCCAATTTCACCAGAAGTGCA  900

seq1  TTTGAAAGACAGTACAGTGGTGACAAAGTAGAAAACTGATGCAGTTTTAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAAAGACAGTACAGTGGTGACAAAGTAGAAAACTGATGCAGTTTTAA  950

seq1  AGTATCTAGATCCAGTGATTTCAAGGGACATTTTTAGCTTGTGACTCTGG  1000
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  AGTATCTAGATCCAGTGATTTC-AGGGACATTTTTAGCTTGTGACTCTGG  999

seq1  CTTTGTGTATCCAGTTCCCTCTTGAGGGAAGAAGGCTCAACTGAGCACTC  1050
      |||||| ||| ||||  |||| |||||  |||| |||| ||||||| |||
seq2  CTTTGTTTAT-CAGT--CCTC-TGAGG--AGAA-GCTC-ACTGAGC-CTC  1040

seq1  TAGGCTTGCTGTTTGGTATATCAACATTTTTATTTGGGAACTCAACACTC  1100
      |||   |||||||  || |||| ||| ||||||||||  ||||||   ||
seq2  TAG--CTGCTGTT--GT-TATC-ACA-TTTTATTTGG--ACTCAA---TC  1078

seq1  GATTTGATAATATCATGAGGTGGAGCCTTCAGGAAGTAGTTA  1142
      ||||||||||| ||||||||||||||  ||||  ||||||||
seq2  GATTTGATAATTTCATGAGGTGGAGC--TCAG--AGTAGTTA  1116

seq1: chr10_94348289_94349435
seq2: B6Ng01-131G10.g_67_1194 (reverse)

seq1  TGTTT-GTATA--AGAAAGCCAAATCTGAATTTTTTTCTAACTCTCATTC  47
      ||||| |||||  |||||||||| || ||  | |||||||||| ||||||
seq2  TGTTTGGTATAAGAGAAAGCCAATTCGGA--TATTTTCTAACTTTCATTC  48

seq1  TTTGCCCTTCACCAGTTTAAAACAATAAAAATGAAAGAATAAAAAAGCAA  97
      ||||||  || |||||    |||||| ||||||  || || |||||||||
seq2  TTTGCC--TC-CCAGT---GAACAAT-AAAATG--AGGAT-AAAAAGCAA  88

seq1  ACCACAACACCAAGTATGTATAACCAGATGGTCAACCAACAACAGTATCT  147
      ||||| || |||||||||||| ||||||| ||||  |||| |||||||||
seq2  ACCAC-ACCCCAAGTATGTAT-ACCAGAT-GTCA--CAAC-ACAGTATCT  132

seq1  TATTACTTCTCAAATATTGCAGATTGTAAAATCTCGACAGCACATTACCC  197
      |||||||||||||||| |||||| ||| ||||||||||||||||||||||
seq2  TATTACTTCTCAAATA-TGCAGA-TGT-AAATCTCGACAGCACATTACCC  179

seq1  ACACATTCGCATTTCTCAAGGAGGGGGAGCAGAGCTCAGCGC-TTCCACA  246
      ||||||||||| |||||||||| ||||||||||||||||||| |||||||
seq2  ACACATTCGCA-TTCTCAAGGA-GGGGAGCAGAGCTCAGCGCTTTCCACA  227

seq1  TCTTAGTAAACAAAACCAGGGGGTTTGGGATGATTTCTGTTGAAACAAAT  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAGTAAACAAAACCAGGGGGTTTGGGATGATTTCTGTTGAAACAAAT  277

seq1  CGTTCTTATTCTTGTGGACCCATCAAGGAAATGGCCAAATGGATAAATTC  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTTCTTATTCTTGTGGACCCATCAAGGAAATGGCCAAATGGATAAATTC  327

seq1  TCAAGCCATTCCCGGAATGACATGAAAATATCATTCCACTTGGCGATTGA  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGCCATTCCCGGAATGACATGAAAATATCATTCCACTTGGCGATTGA  377

seq1  TGAGCCACTTGACCACTCGATGGGCAGGTTCTCCTTCTCCAGTTTCTGTC  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCCACTTGACCACTCGATGGGCAGGTTCTCCTTCTCCAGTTTCTGTC  427

seq1  TCCATCCTCCACAGGGTCTCATGTAGACCAAGGTGGCCTCAAAATCACAA  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATCCTCCACAGGGTCTCATGTAGACCAAGGTGGCCTCAAAATCACAA  477

seq1  TGTAGGAGGGCAAAGATGGCTTCAAGTGTCTCATCCTTCTGCCTCCACCT  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGGAGGGCAAAGATGGCTTCAAGTGTCTCATCCTTCTGCCTCCACCT  527

seq1  CCCAAGGGCTAGGATTACAAGCAAGCTCTCTTGTCAGCCAAATTCCTAGA  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAAGGGCTAGGATTACAAGCAAGCTCTCTTGTCAGCCAAATTCCTAGA  577

seq1  TCTCTTAACTGGTTTTCGTTCCACTTTGCCAGGCCATTTTGAATAGGAGG  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTAACTGGTTTTCGTTCCACTTTGCCAGGCCATTTTGAATAGGAGG  627

seq1  GAAACTGGAGTCATCTTAGCCCAAGTGTGTTCTGGAGAAAATGTCAGGGG  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACTGGAGTCATCTTAGCCCAAGTGTGTTCTGGAGAAAATGTCAGGGG  677

seq1  TGTGTATGTGTTCGTTGTATGTTTGTGTATGTGTTCTTTGTGTGTTTGTA  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTATGTGTTCGTTGTATGTTTGTGTATGTGTTCTTTGTGTGTTTGTA  727

seq1  TATGTGTTCGTTGTATGTTTGTGTATGTGTTCTTTGTATGTTTGTGTATG  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTGTTCGTTGTATGTTTGTGTATGTGTTCTTTGTATGTTTGTGTATG  777

seq1  TGTTCTTTATATGTTTGTGTATGTGTTTGTTGTATGTTTGTGTATGTGTT  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCTTTATATGTTTGTGTATGTGTTTGTTGTATGTTTGTGTATGTGTT  827

seq1  CTTTGTATGTTTGTGTGTGTGTTCTTTGTATGTTTGTGTGTATGTGTTCA  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGTATGTTTGTGTGTGTGTTCTTTGTATGTTTGTGTGTATGTGTTCA  877

seq1  TTGTATGTTTGTGTGTGTGTTCTTTGTATGTTTGTGTATGTGTTCATTGC  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTATGTTTGTGTGTGTGTTCTTTGTATGTTTGTGTATGTGTTCATTGC  927

seq1  TTATGCTGGGGCATGTGCTCCCCCTCTTCCAAGGATCTGTGCAGCTTTGG  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGCTGGGGCATGTGCTCCCCCTCTTCCAAGGATCTGTGCAGCTTTGG  977

seq1  CAGAAGACCCAGACTCATATATTTATAAAAAAAATAAAGATTTATTTCTT  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAGACCCAGACTCATATATTTATAAAAAAAATAAAGATTTATTTCTT  1027

seq1  AAGAAACTGGGATAGTTATGACTGGGCACTTGACTCTGGTGAAACATCTC  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAACTGGGATAGTTATGACTGGGCACTTGACTCTGGTGAAACATCTC  1077

seq1  TGGCTGTGTCATTCCCTGGGAGAAGAGGATGTCAAAAAAGACACAGAATT  1146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTGTGTCATTCCCTGGGAGAAGAGGATGTCAAAAAAGACACAGAATT  1127

seq1  C  1147
      |
seq2  C  1128