BAC Information

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BAC

Clone NameB6Ng01-131P14
Chromosome10 (Build37)
Map Location 127,765,175 - 127,874,154
singlet/doubletdoublet
Overlap geneCs, Coq10a, Ankrd52, Slc39a5, Obfc2b, Rnf41
Upstream geneArhgap9, Gli1, Inhbe, Inhbc, R3hdm2, Stac3, Ndufa4l2, Shmt2, Nxph4, Lrp1, LOC100043054, Stat6, Nab2, BC030440, Myo1a, Tac2, Zbtb39, Admr, Rdh1, Rdh9, Rdh16, AY053573, Rdhs, BC089597, Rdh7, Sdro, LOC382468, Hsd17b6, LOC100043618, Prim1, LOC100043077, Naca, Ptges3, Atp5b, Baz2a, LOC100043085, Rbms2, LOC100043624, Gls2, Spryd4, Mip, Timeless, Apon, Apof, Stat2, Il23a, Usp52, Tmem4
Downstream geneSmarcc2, Myl6, Myl6b, Mbc2, Zc3h10, Rpl41, LOC668453, Pa2g4, Erbb3, LOC100043114, LOC668459, Rps26, Ikzf4, Suox, EG622589, Rab5b, Cdk2, Si, Dgka, LOC100043669, Wibg, LOC622655, Mmp19, 1110012D08Rik, Dnajc14, Ormdl2, 1110005A23Rik, Gdf11, Cd63, Rdh5, Bloc1s1, Itga7, Mettl7b, Olfr9, Olfr763, EG622733, EG546487, Olfr765, Olfr768, Olfr769, Olfr770, Olfr771, Olfr772, Olfr773-ps1, LOC624925, Olfr774, Olfr1518, Olfr776, Olfr777, Olfr778-ps1, LOC544749, Olfr780, Olfr781, Olfr782, Olfr783-ps1, Olfr784, EG546488, Olfr786
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-131P14.bB6Ng01-131P14.g
ACCDH932898DH932899
length6701,130
definitionDH932898|Mus musculus domesticus DNA, BAC clone: B6Ng01-131P14, 5' end.DH932899|Mus musculus domesticus DNA, BAC clone: B6Ng01-131P14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(127,765,175 - 127,765,843)(127,873,027 - 127,874,154)
sequence
gaattcagttcacgatatagactatgctacccactaatccaaaaagatct
gcctgcctctgcctctccagaactgggattaaaagcacatgctacataca
gccgggtggtggcggtgcatgcctttaatcccagcacttgggaggcagag
gcaggcggatttctgagttcgaggccagcctggtctacagattgagttcc
aggacagccagggctacacagagaaaccctgtctcgaaaaaccaaaaaaa
aaaaaaaaaaaaactgagccacctccagcccctggagcatactttaaaga
aaaaggaaaaaagggggttgtttgtatatgtatacatgggcacaagtcag
aggacaactctatgaggcctactccttccaccttggcattgttggggtcc
aggagtcactccacaaccatatgaacactgatctcagccagacagggata
gtttattgagcatgtgccccaggacctgattgatcagggctgcagagcag
actcaggagctgactgtgaccctgagcgtggatcctacagagcttttaag
tctgaaacccacaaacatctgtgccgagttatcacacccatcagggttta
gggataggagacttccttaggagcaggtctttgttgtacatttatcctgt
ttactattggctggggtatt
gaattcaaggccagattggactgcagagtgagttccaagacagccaagac
tatacagagaaaccctgtcttgaaaaaacaaacaaaaaaacaaacaaaca
aacaagagaaggcagtccggggctggagagatggctcagcgattaagagc
actgactgttcttatgaaggtcctgagttcaaatcccagcaaccacatgg
tggcttacaaccatctgtaatgacatctgacccctctactggtgtgtctg
aagacagatacagtgtacttacatataaataataaataaatctttaaaaa
ttaaaaaaaaaaaagagaaggcagtccatatgtcaggtgactgaatgggt
gaaggacatgagggaagtgagggcagacaggtccaacgggttccctactg
aactgccgacagagcaggacacaggctgtggtgtctggcactggcaggag
atcccttaccaggagaacatgcccccctcatttcccaggccccacctgct
ctgccagctggtgcttgtgttcagccgaggtcttctccagctctgcaatg
cgcgactgctgctgctggaccacggagcgcaggtgcttaatgcaattgtg
gtttggcagttcatctttgggcatctccaggctgcagtccagaatgagac
aagagcagaacaagctattcgaggggacattataagctcatggcttattc
tgtgacagaaaactgctgagagagctttctacaactcacactctaacaat
ctttccaagcctccctttctttaatttttccaaacatgctctttgccctt
atatagaacttttacccacaaacagcatggggggggcaccaataaaggcc
ccacttaggccaggctgtcctctaatttgtgctaagaatgacttttgaat
gtctgctctccttcctccaccttccagtgctgggatatgggtgtgatccc
catgctggctactcccgagttgcttcagacagagccagctatgcagacta
ggaaagccactctgccgactgagctggcagcacatgcccagcaccctgca
cggattctcctcctggtgcctttaagagccagccatctatcttaaggagc
ccatcctgaattagagggaattgtttgtat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_127765175_127765843
seq2: B6Ng01-131P14.b_48_717

seq1  GAATTCAGTTCACGATATAGACTATGCTACCCTCTAATCCAAAAAGATCT  50
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  GAATTCAGTTCACGATATAGACTATGCTACCCACTAATCCAAAAAGATCT  50

seq1  GCCTGCCTCTGCCTCTCCAGAACTGGGATTAAAAGCACATGCTACATACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGCCTCTGCCTCTCCAGAACTGGGATTAAAAGCACATGCTACATACA  100

seq1  GCCGGGTGGTGGCGGTGCATGCCTTTAATCCCAGCACTTGGGAGGCAGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCGGGTGGTGGCGGTGCATGCCTTTAATCCCAGCACTTGGGAGGCAGAG  150

seq1  GCAGGCGGATTTCTGAGTTCGAGGCCAGCCTGGTCTACAGATTGAGTTCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGCGGATTTCTGAGTTCGAGGCCAGCCTGGTCTACAGATTGAGTTCC  200

seq1  AGGACAGCCAGGGCTACACAGAGAAACCCTGTCTCGAAAAACCAAAAAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACAGCCAGGGCTACACAGAGAAACCCTGTCTCGAAAAACCAAAAAAA  250

seq1  AAAAAAAAAAAAACTGAGCCACCTCCAGCCCCTGGAGCATACTTTAAAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAAAAAACTGAGCCACCTCCAGCCCCTGGAGCATACTTTAAAGA  300

seq1  AAAAGGAAAAAAGGGGGTTGTTTGTATATGTATACATGGGCACAAGTCAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGGAAAAAAGGGGGTTGTTTGTATATGTATACATGGGCACAAGTCAG  350

seq1  AGGACAACTCTATGAGGCCTACTCCTTCCACCTTGGCATTGTTGGGGTCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACAACTCTATGAGGCCTACTCCTTCCACCTTGGCATTGTTGGGGTCC  400

seq1  AGGAGTCACTCCACAACCATATGAACACTGATCTCAGCCAGACAGGGATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGTCACTCCACAACCATATGAACACTGATCTCAGCCAGACAGGGATA  450

seq1  GTTTATTGAGCATGTGCCCCAGGACCTGATTGATCAGGGCTGCAGAGCAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTATTGAGCATGTGCCCCAGGACCTGATTGATCAGGGCTGCAGAGCAG  500

seq1  ACTCAGGAGCTGACTGTGACCCTGAGCGTGGATCCTACAGAGCTTTTAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAGGAGCTGACTGTGACCCTGAGCGTGGATCCTACAGAGCTTTTAAG  550

seq1  TCTGAAACCCACAAACATCTGTGCCGAGTTATCACACCCATCAGGGTTTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAAACCCACAAACATCTGTGCCGAGTTATCACACCCATCAGGGTTTA  600

seq1  GGGATAGGAGACTTCCTTAGGAGCAGGTCTTTGTTGTACATTTATCCTG-  649
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  GGGATAGGAGACTTCCTTAGGAGCAGGTCTTTGTTGTACATTTATCCTGT  650

seq1  TTACTATTGGCTGGGGTATT  669
      ||||||||||||||||||||
seq2  TTACTATTGGCTGGGGTATT  670

seq1: chr10_127873027_127874154
seq2: B6Ng01-131P14.g_70_1199 (reverse)

seq1  ATACAACAATTTCCCTCTTAATTCAGGAT-GGCTCC-TAAGAT-GATGGC  47
      ||||||  | ||||||| ||||||||||| |||||| |||||| ||||||
seq2  ATACAAACAATTCCCTC-TAATTCAGGATGGGCTCCTTAAGATAGATGGC  49

seq1  TGGCTCTTAAAGGCA-CAAGAGGAGAATCCGTGGCAGGGTGCTGGGCATG  96
      ||||||||||||||| || ||||||||||||| |||||||||||||||||
seq2  TGGCTCTTAAAGGCACCAGGAGGAGAATCCGT-GCAGGGTGCTGGGCATG  98

seq1  TGCTGCCAGCTCAGTCGGCAGAGT-GCTTTCCTAGTCTGCATAGCTGGCT  145
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  TGCTGCCAGCTCAGTCGGCAGAGTGGCTTTCCTAGTCTGCATAGCTGGCT  148

seq1  CTGTCTTGAGCACCTCGGGAGTAGCCAGCATGGTGATCACACCCATAATC  195
      ||||||  |||| |||||||||||||||||||| |||||||||||| |||
seq2  CTGTCTGAAGCAACTCGGGAGTAGCCAGCATGGGGATCACACCCAT-ATC  197

seq1  CCAGCACTGGAAGGTGGAGGAAGGAGAGCAGACATTC-AAAGTCATTCTT  244
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  CCAGCACTGGAAGGTGGAGGAAGGAGAGCAGACATTCAAAAGTCATTCTT  247

seq1  AGCACAAATTAGAGGACAGCCTGGCCTAAGTGGGGCCTTTATTGGTGCCC  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACAAATTAGAGGACAGCCTGGCCTAAGTGGGGCCTTTATTGGTGCCC  297

seq1  CCCCCATGCTGTTTTGTGGGTAAAAGTTCTATATAAGGGCAAAGAGCATG  344
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  CCCCCATGCTG-TTTGTGGGTAAAAGTTCTATATAAGGGCAAAGAGCATG  346

seq1  TTTGGAAAAATTAAAGAAAGGGAGGCTTGGAAAGATTGTTAGAGTGTGAG  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGAAAAATTAAAGAAAGGGAGGCTTGGAAAGATTGTTAGAGTGTGAG  396

seq1  TTGTAGAAAGCTCTCTCAGCAGTTTTCTGTCACAGAATAAGCCATGAGCT  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAGAAAGCTCTCTCAGCAGTTTTCTGTCACAGAATAAGCCATGAGCT  446

seq1  TATAATGTCCCCTCGAATAGCTTGTTCTGCTCTTGTCTCATTCTGGACTG  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAATGTCCCCTCGAATAGCTTGTTCTGCTCTTGTCTCATTCTGGACTG  496

seq1  CAGCCTGGAGATGCCCAAAGATGAACTGCCAAACCACAATTGCATTAAGC  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCTGGAGATGCCCAAAGATGAACTGCCAAACCACAATTGCATTAAGC  546

seq1  ACCTGCGCTCCGTGGTCCAGCAGCAGCAGTCGCGCATTGCAGAGCTGGAG  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGCGCTCCGTGGTCCAGCAGCAGCAGTCGCGCATTGCAGAGCTGGAG  596

seq1  AAGACCTCGGCTGAACACAAGCACCAGCTGGCAGAGCAGGTGGGGCCTGG  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACCTCGGCTGAACACAAGCACCAGCTGGCAGAGCAGGTGGGGCCTGG  646

seq1  GAAATGAGGGGGGCATGTTCTCCTGGTAAGGGATCTCCTGCCAGTGCCAG  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATGAGGGGGGCATGTTCTCCTGGTAAGGGATCTCCTGCCAGTGCCAG  696

seq1  ACACCACAGCCTGTGTCCTGCTCTGTCGGCAGTTCAGTAGGGAACCCGTT  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCACAGCCTGTGTCCTGCTCTGTCGGCAGTTCAGTAGGGAACCCGTT  746

seq1  GGACCTGTCTGCCCTCACTTCCCTCATGTCCTTCACCCATTCAGTCACCT  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACCTGTCTGCCCTCACTTCCCTCATGTCCTTCACCCATTCAGTCACCT  796

seq1  GACATATGGACTGCCTTCTCTTTTTTTTTTTTAATTTTTAAAGATTTATT  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATATGGACTGCCTTCTCTTTTTTTTTTTTAATTTTTAAAGATTTATT  846

seq1  TATTATTTATATGTAAGTACACTGTATCTGTCTTCAGACACACCAGTAGA  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTATTTATATGTAAGTACACTGTATCTGTCTTCAGACACACCAGTAGA  896

seq1  GGGGTCAGATGTCATTACAGATGGTTGTAAGCCACCATGTGGTTGCTGGG  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGTCAGATGTCATTACAGATGGTTGTAAGCCACCATGTGGTTGCTGGG  946

seq1  ATTTGAACTCAGGACCTTCATAAGAACAGTCAGTGCTCTTAATCGCTGAG  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGAACTCAGGACCTTCATAAGAACAGTCAGTGCTCTTAATCGCTGAG  996

seq1  CCATCTCTCCAGCCCCGGACTGCCTTCTCTTGTTTGTTTGTTTGTTTTTT  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCTCTCCAGCCCCGGACTGCCTTCTCTTGTTTGTTTGTTTGTTTTTT  1046

seq1  TGTTTGTTTTTTCAAGACAGGGTTTCTCTGTATAGTCTTGGCTGTCTTGG  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTGTTTTTTCAAGACAGGGTTTCTCTGTATAGTCTTGGCTGTCTTGG  1096

seq1  AACTCACTCTGCAGTCCAATCTGGCCTTGAATTC  1128
      ||||||||||||||||||||||||||||||||||
seq2  AACTCACTCTGCAGTCCAATCTGGCCTTGAATTC  1130