BAC Information

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BAC

Clone NameB6Ng01-132A21
Chromosome10 (Build37)
Map Location 9,017,284 - 9,120,024
singlet/doubletdoublet
Overlap geneLOC666636
Upstream geneUst, Sash1, LOC100039173, EG666625
Downstream geneE130306M17Rik, LOC666658, LOC620417, Stxbp5, LOC100039238, LOC665110, 9130014G24Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-132A21.bB6Ng01-132A21.g
ACCDH932959DH932960
length4691,157
definitionDH932959|Mus musculus domesticus DNA, BAC clone: B6Ng01-132A21, 5' end.DH932960|Mus musculus domesticus DNA, BAC clone: B6Ng01-132A21, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(9,119,550 - 9,120,024)(9,017,284 - 9,018,477)
sequence
cagggaagttcagtgatgatcaatatctctggaaaagtcacatgccagag
aaatgaaatgaggtgatgataaggacatcaagagttagaatagcaggtaa
ggggagggcctgcggcccagagatgtgtgcatctatgtaattcccacagt
tatggtggagatgggggctttcttgctctcctaatgtcttgcatcacagc
acaaaaataaggagagaacagagatccaagatctaaggatttttctcagg
tggccaagtgcttgcctagtgtgacacggtcacttatgaggtcactcttc
aaaagcccttcttgtctatttagtgagtttgaggtcaagagtgtggggca
aggaggaagagagagagagagagagagagagagagagagagaatgaatga
gaatacttaggccagtgactaacagaccacaatatgggctagaatgtaca
ttatggagcaggggaactt

gaattctgtagccattgtgatgttggttcactcatgcagtcacacagtca
aagaaatgtccagaggaaatttcctgcccatttcttaggagcaatttaaa
agaaggacatcaagaataaattccacggttttacctttcataaggatttc
tgctcagtcacacaaaagccttgaataaataatttagccttaggttacag
gctacacaacgatgtctaatgttcacctaccacgaaggagctcatgtaac
atttgacagaacattcaatttttttttgagaaaacatcaccaagagatga
attctgtctctgaaaatatgactagcattgacaattagtagtaccatctg
ccaacaaggcatagaagaggtttatgcactagtatgttcagcatactaat
acatgaaaatataattacagaatctatttgtgaaaactactatttctaca
aagaaaatttaatgacatattaattacatgtgatttgttgtattgatgaa
aaaagtcttctttttttctattctttaaaaatacaaatagactagccaga
acaattcacctagcttcattcagcgctgttgtactctctggagaatttga
aataaacaagctcattggctcagcaccttgtgcaggagcagacttagaaa
gctttttgctcatttatatgagatttaatggacaaaggaatctgaacttt
tcagggaactcactgtgagaaattttcaactctgcttcccatgaatccaa
agtcctacgtgggtggcattctctacctacccagtgatgaccagagtcac
taaggcagggtgagaatgagggccctgaagcagcagcaggaggcaggggc
agccaccttagcaaacctgcaagtttccctctcacacatatctgtcttag
ctcttaccaatccctcagtcaatgatagccacagatcttaggaggcatct
cctcccccaaacagtactgcaactacagctactactgtggggacagaagg
agatgagttcgagcaactcatcagactgatggagctgagcaagcagatca
attcatttgataagaaacctgtctgctatgaggaatttctgtactaatgg
gacatgtattgataaagaacttcaaggatcattgatcactgtctgcattc
actggga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_9119550_9120024
seq2: B6Ng01-132A21.b_45_519 (reverse)

seq1  AAGTTCCCCTGCTCCATAATGTACATTCTAGCCCATATTGTGGTCTCTTA  50
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  AAGTTCCCCTGCTCCATAATGTACATTCTAGCCCATATTGTGGTCTGTTA  50

seq1  GTCACTGGCCTTCGTATTCTCATTCATTCTCTCTCTCTCTCTCTCTCTCT  100
      |||||||||||  |||||||||||||||||||||||||||||||||||||
seq2  GTCACTGGCCTAAGTATTCTCATTCATTCTCTCTCTCTCTCTCTCTCTCT  100

seq1  CTCTCTCTCTCTTCCTCCTTGCCCCACACTCTTGACCTCAAACTCACTAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTCTCTCTTCCTCCTTGCCCCACACTCTTGACCTCAAACTCACTAA  150

seq1  ATAGACAAGAAGGGCTTTTGAAGAGTGACCTCATAAGTGACCGTGTCACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGACAAGAAGGGCTTTTGAAGAGTGACCTCATAAGTGACCGTGTCACA  200

seq1  CTAGGCAAGCACTTGGCCACCTGAGAAAAATCCTTAGATCTTGGATCTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGCAAGCACTTGGCCACCTGAGAAAAATCCTTAGATCTTGGATCTCT  250

seq1  GTTCTCTCCTTATTTTTGTGCTGTGATGCAAGACATTAGGAGAGCAAGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTCTCCTTATTTTTGTGCTGTGATGCAAGACATTAGGAGAGCAAGAA  300

seq1  AGCCCCCATCTCCACCATAACTGTGGGAATTACATAGATGCACACATCTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCCCATCTCCACCATAACTGTGGGAATTACATAGATGCACACATCTC  350

seq1  TGGGCCGCAGGCCCTCCCCTTACCTGCTATTCTAACTCTTGATGTCCTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCCGCAGGCCCTCCCCTTACCTGCTATTCTAACTCTTGATGTCCTTA  400

seq1  TCATCACCTCATTTCATTTCTCTGGCATGTGACTTTTCCAGAGATATTGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCACCTCATTTCATTTCTCTGGCATGTGACTTTTCCAGAGATATTGA  450

seq1  TCATCACTGAACTTCCCTGGAATTC  475
      |||||||||||||||||||||||||
seq2  TCATCACTGAACTTCCCTGGAATTC  475


seq1: chr10_9017284_9018477
seq2: B6Ng01-132A21.g_65_1221

seq1  GAATTCTGTAGCCATTGTGATGTTGGTTCACTCATGCAGTCACACAGTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTAGCCATTGTGATGTTGGTTCACTCATGCAGTCACACAGTCA  50

seq1  AAGAAATGTCCAGAGGAAATTTCCTGCCCATTTCTTAGGAGCAATTTAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAATGTCCAGAGGAAATTTCCTGCCCATTTCTTAGGAGCAATTTAAA  100

seq1  AGAAGGACATCAAGAATAAATTCCACGGTTTTACCTTTCATAAGGATTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGGACATCAAGAATAAATTCCACGGTTTTACCTTTCATAAGGATTTC  150

seq1  TGCTCAGTCACACAAAAGCCTTGAATAAATAATTTAGCCTTAGGTTACAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCAGTCACACAAAAGCCTTGAATAAATAATTTAGCCTTAGGTTACAG  200

seq1  GCTACACAACGATGTCTAATGTTCACCTACCACGAAGGAGCTCATGTAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTACACAACGATGTCTAATGTTCACCTACCACGAAGGAGCTCATGTAAC  250

seq1  ATTTGACAGAACATTCAATTTTTTTTTGAGAAAACATCACCAAGAGATGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGACAGAACATTCAATTTTTTTTTGAGAAAACATCACCAAGAGATGA  300

seq1  ATTCTGTCTCTGAAAATATGACTAGCATTGACAATTAGTAGTACCATCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTGTCTCTGAAAATATGACTAGCATTGACAATTAGTAGTACCATCTG  350

seq1  CCAACAAGGCATAGAAGAGGTTTATGCACTAGTATGTTCAGCATACTAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACAAGGCATAGAAGAGGTTTATGCACTAGTATGTTCAGCATACTAAT  400

seq1  ACATGAAAATATAATTACAGAATCTATTTGTGAAAACTACTATTTCTACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGAAAATATAATTACAGAATCTATTTGTGAAAACTACTATTTCTACA  450

seq1  AAGAAAATTTAATGACATATTAATTACATGTGATTTGTTGTATTGATGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAATTTAATGACATATTAATTACATGTGATTTGTTGTATTGATGAA  500

seq1  AAAAGTCTTCTTTTTTTCTATTCTTTAAAAATACAAATAGACTAGCCAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGTCTTCTTTTTTTCTATTCTTTAAAAATACAAATAGACTAGCCAGA  550

seq1  ACAATTCACCTAGCTTCATTCAGCGCTGTTGTACTCTCTGGAGAATTTGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATTCACCTAGCTTCATTCAGCGCTGTTGTACTCTCTGGAGAATTTGA  600

seq1  AATAAACAAGCTCATTGGCTCAGCACCTTGTGCAGGAGCAGACTTAGAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAACAAGCTCATTGGCTCAGCACCTTGTGCAGGAGCAGACTTAGAAA  650

seq1  GCTTTTTGCTCATTTATATGAGATTTAATGGACAAAGGAATCTGAACTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTTTGCTCATTTATATGAGATTTAATGGACAAAGGAATCTGAACTTT  700

seq1  TCAGGGAACTCACTGTGAGAAATTTTCAACTCTGCTTCCCATGAATCCAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGGAACTCACTGTGAGAAATTTTCAACTCTGCTTCCCATGAATCCAA  750

seq1  AGTCCTACGTGGGTGGCATTCTCTACCTACCCAGTGATGACCAGAGTCAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCTACGTGGGTGGCATTCTCTACCTACCCAGTGATGACCAGAGTCAC  800

seq1  TAAGGCAGGGTGAGAATGAGGGCCCTGAAGCAGGCAGCAGGAGGCAGGGG  850
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  TAAGGCAGGGTGAGAATGAGGGCCCTGAAGCA-GCAGCAGGAGGCAGGGG  849

seq1  CAGCCACCTTAGCAAACCTGCAAGTTTCCCTCTCACACATATCTGTCTTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCACCTTAGCAAACCTGCAAGTTTCCCTCTCACACATATCTGTCTTA  899

seq1  GGCTCTTACCAATCCCTCAGTCAATGATAGCCACAGATCTTAGGAGGCAT  950
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  -GCTCTTACCAATCCCTCAGTCAATGATAGCCACAGATCTTAGGAGGCAT  948

seq1  CTCCTCCCCCAAACAGTACTTGCCAACTACCAGCTAACTACCTGTGGGGG  1000
      ||||||||||||||||||||   |||||| ||||| |||| |||| ||||
seq2  CTCCTCCCCCAAACAGTACT--GCAACTA-CAGCT-ACTA-CTGT-GGGG  992

seq1  ACAAGAAGGGAGAAGGAAGTTCGAGCAAACTCATCAGACTGATGGAAGCT  1050
      || |||| ||||| |  ||||||||| |||||||||||||||||| ||||
seq2  AC-AGAA-GGAGATG--AGTTCGAGC-AACTCATCAGACTGATGG-AGCT  1036

seq1  GAGCACAGCCAAGATTCCATTCATTTTGATAAGAAACTGGTTCTTGCCCT  1100
      ||||| |||  ||| || ||||| |||||||||||||  | |||    ||
seq2  GAGCA-AGC--AGA-TCAATTCA-TTTGATAAGAAACCTG-TCT---GCT  1077

seq1  ATGAGGGAATATCTGTTACTTAAATGGGACATGTATAGTGATTAAGAACT  1150
      |||| ||||| |||| ||||  ||||||||||||||  |||| |||||||
seq2  ATGA-GGAATTTCTG-TACT--AATGGGACATGTAT--TGATAAAGAACT  1121

seq1  TTAAAAGAAACCCATTGATCACACTTGTCTGCATTCCACTGGGA  1194
      |   ||| |   ||||||||||   |||||||||| ||||||||
seq2  T--CAAGGA--TCATTGATCAC---TGTCTGCATT-CACTGGGA  1157


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