BAC Information

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BAC

Clone NameB6Ng01-132G04
Chromosome10 (Build37)
Map Location 75,278,593 - 75,469,350
singlet/doubletdoublet
Overlap geneGstt4, Gstt2, Mif, Derl3, Smarcb1, Mmp11, Ndg2, Gm867, Vpreb3, EG333669
Upstream geneEG630453, EG623346, Gnaz, LOC100040057, Rab36, Bcr, Specc1l, LOC100040670, Adora2a, EG544707, Upb1, 1110038D17Rik, Snrpd3, AI646023, Ggt1, Ggtla1, Susd2, Cabin1, Ddt, Gstt3, Gstt1
Downstream geneSuhw2, Slc5a4b, Slc5a4a, LOC100040150, Prmt2, S100b, Dip2a, Pcnt, 2610028H24Rik, A130042E20Rik, Mcm3ap, Lss, 1700027D21Rik, Ftcd, Col6a2, Col6a1, Pcbp3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-132G04.bB6Ng01-132G04.g
ACCDH933200DH933201
length1,038434
definitionDH933200|Mus musculus domesticus DNA, BAC clone: B6Ng01-132G04, 5' end.DH933201|Mus musculus domesticus DNA, BAC clone: B6Ng01-132G04, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(75,278,593 - 75,279,643)(75,468,911 - 75,469,350)
sequence
gaattcaatggactgtggagagcatagaggtcaaagtgtaatatccaaaa
taaaagtcccttcaaaaggactttccaaactatactagcaggccaagtac
agagccagatttaaaaaaaaaaaaacaaaaacaaaaacaaaaaaaacaaa
ctggctcactaaataaatatagaaacatagttttaacggtcaaaaacaag
attagcaattcccctgccctgcctcacactaaaaaccacaagacagacaa
aatgagagtcacctatacaaaccaaccaatgtctaaaaaggttattggct
gcacaaattaaattatgccaaactaccctggtgcctatatccagccctta
caaaggtataaaaagtgtgttctttctttgttctgggtctctcccccagc
ctgcatgttgagagggggttccccaacatgttggataagtaaaatcctca
tgggttttgcaacaatggcggtctctgtggtctttgtgagtgagggtctt
ttgacaagctacaacaaaagcatagggtcctgtgcttggtgcaggccaga
atagttcttcttgtgtagttctacactacacattggccaaggactaaagt
tactactttgaatgctggccagaaactatgatagcctttcaagagactgg
ccaatgagctgaggctgtagctcagtaggtagagtgaaaacaaagcatgc
atacagcacaccacgaaacaggcattttgtatgtacctgtaatccccaca
ttagagaggcagcatcaagactgtcaaaagctgaaggccatccacagcta
aatagctagtctgaggccagcctgggacacaggagaccctatcttaagag
aaggacattcagctgccagacgtggtggcgcacacctttaatcccagcac
ttgggaagcagaggcaagaagatttctgagtttgagcagctgtctacaga
gtgagttcaggactagcaggctatacagagaaccctgtctcaaaaaaaaa
aaaacaaaaggagaagaagaggaggagggagggaggaa
tgagcagaagaaacttgagggggaattccccactatggcccttcttttac
acactagtactcttctctcagcattgcacttccggtatgctctgttagag
atatgtcctgtgtgtactgtgtgtccgtgggggctaaacccaaagactgg
ttcttgagacttgagcttcacccatcacctgaacattgctggggaagggt
tctagagcactaggctttcctggatcccctttctctctcccatgccccct
catcgcctggctctcccatccttcagcctaatctcttcttcccttccctc
ccctccagggtccacctggcctcacagactccatgtgtgcaaacaagccc
agaagcattttagtgggaagaaagcgaacaatagaagtcgttctatccag
atgtgtctgggggtaaggatggtggggtaggagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_75278593_75279643
seq2: B6Ng01-132G04.b_46_1083

seq1  GAATTCAATGGACTGTGGAGAGCATAGAGGTCAAAGTGTAATATCCAAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATGGACTGTGGAGAGCATAGAGGTCAAAGTGTAATATCCAAAA  50

seq1  TAAAAGTCCCTTCAAAAGGACTTTCCAAACTATACTAGCAGGCCAAGTAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAGTCCCTTCAAAAGGACTTTCCAAACTATACTAGCAGGCCAAGTAC  100

seq1  AGAGCCAGATTTAAAAAAAAAAAAACAAAAACAAAAACAAAAAAAACAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCCAGATTTAAAAAAAAAAAAACAAAAACAAAAACAAAAAAAACAAA  150

seq1  CTGGCTCACTAAATAAATATAGAAACATAGTTTTAACGGTCAAAAACAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCTCACTAAATAAATATAGAAACATAGTTTTAACGGTCAAAAACAAG  200

seq1  ATTAGCAATTCCCCTGCCCTGCCTCACACTAAAAACCACAAGACAGACAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGCAATTCCCCTGCCCTGCCTCACACTAAAAACCACAAGACAGACAA  250

seq1  AATGAGAGTCACCTATACAAACCAACCAATGTCTAAAAAGGTTATTGGCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAGAGTCACCTATACAAACCAACCAATGTCTAAAAAGGTTATTGGCT  300

seq1  GCACAAATTAAATTATGCCAAACTACCCTGGTGCCTATATCCAGCCCTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACAAATTAAATTATGCCAAACTACCCTGGTGCCTATATCCAGCCCTTA  350

seq1  CAAAGGTATAAAAAGTGTGTTCTTTCTTTGTTCTGGGTCTCTCCCCCAGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGGTATAAAAAGTGTGTTCTTTCTTTGTTCTGGGTCTCTCCCCCAGC  400

seq1  CTGCATGTTGAGAGGGGGTTCCCCAACATGTTGGATAAGTAAAATCCTCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCATGTTGAGAGGGGGTTCCCCAACATGTTGGATAAGTAAAATCCTCA  450

seq1  TGGGTTTTGCAACAATGGCGGTCTCTGTGGTCTTTGTGAGTGAGGGTCTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTTTTGCAACAATGGCGGTCTCTGTGGTCTTTGTGAGTGAGGGTCTT  500

seq1  TTGACAAGCTACAACAAAAGCATAGGGTCCTGTGCTTGGTGCAGGCCAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACAAGCTACAACAAAAGCATAGGGTCCTGTGCTTGGTGCAGGCCAGA  550

seq1  ATAGTTCTTCTTGTGTAGTTCTACACTACACATTGGCCAAGGACTAAAGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTTCTTCTTGTGTAGTTCTACACTACACATTGGCCAAGGACTAAAGT  600

seq1  TACTACTTTGAATGCTGGCCAGAAACTATGATAGCCTTTCAAGAGACTGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTACTTTGAATGCTGGCCAGAAACTATGATAGCCTTTCAAGAGACTGG  650

seq1  CCAATGAGCTGAGGCTGTAGCTCAGTAGGTAGAGTGAAAACAAAGCATGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATGAGCTGAGGCTGTAGCTCAGTAGGTAGAGTGAAAACAAAGCATGC  700

seq1  ATACAGCACACCACGAAACAGGCATTTTGTATGTACCTGTAATCCCCACA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAGCACACCACGAAACAGGCATTTTGTATGTACCTGTAATCCCCACA  750

seq1  TTAGAGAGGCAGCATCAAGACTGTCAAAAGCTGAAGGCCATCCACAGCTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAGAGGCAGCATCAAGACTGTCAAAAGCTGAAGGCCATCCACAGCTA  800

seq1  AATAGCTAGTCTGAGGCCAGCCTGGGACACAGGAGACCCTATCTTAAGAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGCTAGTCTGAGGCCAGCCTGGGACACAGGAGACCCTATCTTAAGAG  850

seq1  AAGGACATTCAGCTGCCAGACGTGGTGGCGCACACCTTTAATCCCAGCAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGACATTCAGCTGCCAGACGTGGTGGCGCACACCTTTAATCCCAGCAC  900

seq1  TTGGGAAGCAGAGGCAAGAAGATTTCTGAGTTTGAGGCCAGCCTGGTCTA  950
      ||||||||||||||||||||||||||||||||||||  ||||   |||||
seq2  TTGGGAAGCAGAGGCAAGAAGATTTCTGAGTTTGAG--CAGC--TGTCTA  946

seq1  CAGAGTGAGTTCCAGGACTAGCCAAGGGCTATACAGAGAAACCCTGTCTC  1000
      ||||||||||| ||||||||||    |||||||||||| |||||||||||
seq2  CAGAGTGAGTT-CAGGACTAGC---AGGCTATACAGAG-AACCCTGTCTC  991

seq1  AAAAAAAAAAAAAACAAAAAGGAAGAAAGAAAGAAGGGAGGGAGGGAGGG  1050
       ||||||||||||||||||  | ||||  | || | ||||||||||||| 
seq2  -AAAAAAAAAAAAACAAAA--GGAGAAGAAGAGGA-GGAGGGAGGGAGGA  1037

seq1  A  1051
      |
seq2  A  1038

seq1: chr10_75468911_75469350
seq2: B6Ng01-132G04.g_68_507 (reverse)

seq1  CCTCCTACCCCACCATCCTTACCCCCAGACACATCTGGATAGAACGACTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCTACCCCACCATCCTTACCCCCAGACACATCTGGATAGAACGACTT  50

seq1  CTATTGTTCGCTTTCTTCCCACTAAAATGCTTCTGGGCTTGTTTGCACAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTGTTCGCTTTCTTCCCACTAAAATGCTTCTGGGCTTGTTTGCACAC  100

seq1  ATGGAGTCTGTGAGGCCAGGTGGACCCTGGAGGGGAGGGAAGGGAAGAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAGTCTGTGAGGCCAGGTGGACCCTGGAGGGGAGGGAAGGGAAGAAG  150

seq1  AGATTAGGCTGAAGGATGGGAGAGCCAGGCGATGAGGGGGCATGGGAGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTAGGCTGAAGGATGGGAGAGCCAGGCGATGAGGGGGCATGGGAGAG  200

seq1  AGAAAGGGGATCCAGGAAAGCCTAGTGCTCTAGAACCCTTCCCCAGCAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGGGGATCCAGGAAAGCCTAGTGCTCTAGAACCCTTCCCCAGCAAT  250

seq1  GTTCAGGTGATGGGTGAAGCTCAAGTCTCAAGAACCAGTCTTTGGGTTTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCAGGTGATGGGTGAAGCTCAAGTCTCAAGAACCAGTCTTTGGGTTTA  300

seq1  GCCCCCACGGACACACAGTACACACAGGACATATCTCTAACAGAGCATAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCCCACGGACACACAGTACACACAGGACATATCTCTAACAGAGCATAC  350

seq1  CGGAAGTGCAATGCTGAGAGAAGAGTACTAGTGTGTAAAAGAAGGGCCAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGAAGTGCAATGCTGAGAGAAGAGTACTAGTGTGTAAAAGAAGGGCCAT  400

seq1  AGTGGGGAATTCCCCCTCAAGTTTCTTCTGCTCAGAATTC  440
      ||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGGGAATTCCCCCTCAAGTTTCTTCTGCTCAGAATTC  440