MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-132G16
Chromosome	10 (Build37)
Map Location	3,035,847 - 3,036,760
singlet/doublet	singlet
Overlap gene	none
Upstream gene	none
Downstream gene	Cnksr3, Oprm1, A130090K04Rik, LOC237252, LOC100041224
Link	Open Mouse BAC browser

Click to get alignment info.

name	Cnksr3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:215748 MGI:2674130
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Oprm1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18390 MGI:97441
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	A130090K04Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:320495 MGI:2444159
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC237252 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:237252
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 2 Proteins pseudo : _no_value

name	LOC100041224 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041224
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins

name	Cnksr3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802317 GeneID:215748 MGI:2674130
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Cnksr family member 3 transcript_id : NM_172546.2

name	Oprm1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:89001113 GeneID:18390 MGI:97441
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : opioid receptor, mu 1 transcript_id : NM_001039652.1

name	A130090K04Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:85701886 GeneID:320495 MGI:2444159
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA A130090K04 gene transcript_id : NM_001033391.1

name	LOC100041224 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149260614 GeneID:100041224
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins product : similar to ubiquitin-conjugating enzyme E2 UbcH-ben transcript_id : XM_001476000.1

name	Cnksr3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27369772 CCDS:CCDS23670.1 GeneID:215748 MGI:2674130
definition	GO_component : GO:0005737 - cytoplasm [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0016301 - kinase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA] GO_process : GO:0009966 - regulation of signal transduction [Evidence IEA] codon_start : 1 note : membrane associated guanylate kinase interacting protein-like 1; maguin-like protein product : Cnksr family member 3 protein_id : NP_766134.1

name	Oprm1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:89001114 GeneID:18390 MGI:97441
definition	GO_component : GO:0016020 - membrane [Evidence IEA]; GO:0005624 - membrane fraction [Evidence IDA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004988 - mu-opioid receptor activity [Evidence IDA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007610 - behavior [Evidence IMP]; GO:0007191 - dopamine receptor, adenylate cyclase activating pathway [Evidence IDA]; GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO:0007193 - G-protein signaling, adenylate cyclase inhibiting pathway [Evidence IDA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : mu opioid receptor mMOR-1R1; mu opiod receptor 1 splice variant Eiii; mu opiod receptor 1 splice variant Eiv product : opioid receptor, mu 1 protein_id : NP_001034741.1

name	A130090K04Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85701887 CCDS:CCDS23671.1 GeneID:320495 MGI:2444159
definition	codon_start : 1 product : hypothetical protein LOC320495 protein_id : NP_001028563.1

name	LOC100041224 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149260615 GeneID:100041224
definition	codon_start : 1 product : similar to ubiquitin-conjugating enzyme E2 UbcH-ben protein_id : XP_001476050.1

name	LOC237252 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149260613 GeneID:237252
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 2 Proteins product : similar to Tripartite motif-containing 59 pseudo : _no_value transcript_id : XR_032502.1

clone name	MSMg01-518B03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-083J22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-068J23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-098E22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-062D20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-381A03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-176D18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-506K16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-156O09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-463P06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-070P08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-237F20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-342E14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-317N23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-457O04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-073K12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-382P19
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-482B24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-490E08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-353A22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-469M15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-357H04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-377L10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-368F14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-096B04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-526J03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-428P06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-132J09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-334O19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-089M13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-157O23
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-301L02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-126K12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-515D14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-157I16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-540F15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-418B12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-350K20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-366N12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-301C06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-463J18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-217F14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-456N02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-526D17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-352J15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-444A10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-211B10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-445G15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-232N17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-348A09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-132G16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-163M09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-290P24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-269H14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-237D11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-126I12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-023M20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-170K08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-004N14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-082H14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-350H11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-306I21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-237F23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-128L13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-282C21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-035L06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-148A03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-336G20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-177C11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-117F06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-347E03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-211D16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-199L01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-240M20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-077J05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-337B24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-117I05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-040C19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-245E22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-245F24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-249A10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-006A17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-163B11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-290P13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-323A10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-179N13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-114P24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-234D14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-013E12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-140P03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-132G09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-166C01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-343M18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-224P01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-080E15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-326L23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-107M15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-231G21
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-132G16.b	B6Ng01-132G16.g
ACC	DH933224	DH933225
length	916	862
definition	DH933224\|Mus musculus domesticus DNA, BAC clone: B6Ng01-132G16, 5' end.	DH933225\|Mus musculus domesticus DNA, BAC clone: B6Ng01-132G16, 3' end.
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	gaattctctgcacctcctgcaccatgcctgtctggatgctgccatgctcc ctgccttgatgataatgggttgaacctctgaaccctgtaagccagcccca attagttgttgtcctttataagacttgccttggtcatggtgtctgttcac agcagtaaaaccctaagacaggcaacggatgtggaaccaggttactgcca aacccaaaactatggcctgtgatgctctgtgtgcactcaggtgtggctca gggtccttagggttctctgagatggcagatgaagcagctttctagctaat agttatccttgggactcatagctaaggacctaaggttgccaggggactgc tgccagcacagggagcctggttcatctggacaggctggcccatcggaggc cgtgagaaagactcctggcaaagctctagtttatgtaagagttgtcctca gaggatgtcctttgacatactgttgagaacaaactctttttaaaattttg ttatttatttatatttcaaatgttttctcctttccttgtttcccctctgc aaaccccctatcccatccccccttaccctgcttctgagggagctccccac caacccacccacccactcctgtctcactaccctggcattcccctacactg ggacaaagagccttcacaggaccaagggcctcccctcacattgatgcctg acaatgccatcctctgccacatatgcaactgaagccacaagtcccaccat gtatgctctttggttggtgatttagtccttgggagctctggtggtggtgg tgggggtctgtctggttggttgaaagttgctccttcctatggggttgcaa accctttttgttcctacagtcttcacctaaattcctccattgggggtctc catgctcagtccgata	gaattctcatattggttccctgaactgtagagtgagggctattatggttg gaaaggccaaatggaagcctttagagttgcctttgccaaagaaaatagtg aatcaaaaacagtatcgtattcctggaggcattgcagaaattactgccac tatcaaggacttgaaagacgcaggggtggtggttcccaccacatctccgt ttaactctcctatctggccagtgcagaaaacagatggatcatggagaatg acagttgattatcgaaaactaaatcaggtagtaactccaattgcagctgc tgtaccagatgtagtttcgttacttgagcaaattaacacatctcctggca cctggtatgcggctattgatctggcaaatgccttcttctcagtacctgtc cataaggaccaccagaagcaatttgctttcagttggcaaggccaacagta taccttcacagttttgcctcaaggatatattaactctcctgccctgtgtc ataatttagttagaagggatcttgatcgtttggatcttccacaaaatatc acattggtgcactatattgatgacattatgctgattggaacaagtgagca ggaagtagcaaccacttttggactcatttggtaacacatatgcgtatcag aggatgggaaataaatccaaccaaaattcaaggaccatctacctcagtga aattcttaggagtccagtggtgtgggggcatgcagagtattccttctaag gtgaaagataaattattgcacctggcccctcctacaaccaagaaagaagc acaacgttttatgggtctattttggattctggagacaactcatccctcac ttgggtgttgtg
quality values	Open. Hide. 61 42 24 25 61 47 61 61 61 43 52 43 61 61 61 61 61 61 61 61 55 61 40 43 61 61 31 41 36 49 37 27 24 33 55 40 35 47 61 61 59 61 59 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 59 59 61 61 61 61 61 59 61 61 61 61 59 59 59 59 59 59 61 61 61 61 61 61 61 61 59 59 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 59 61 61 59 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 59 59 61 59 61 61 59 61 61 59 61 59 61 61 61 55 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 55 61 61 55 55 61 55 61 55 61 61 61 61 61 61 61 61 61 61 61 55 61 61 55 55 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 50 61 55 55 47 61 61 61 61 61 61 61 61 61 61 61 55 61 55 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 50 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 52 61 61 61 61 61 61 61 61 61 61 61 61 61 53 47 53 50 50 53 53 50 50 53 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 52 61 61 61 61 61 61 61 61 47 61 61 61 61 61 61 61 61 47 50 61 61 61 43 61 61 61 42 45 50 42 42 42 39 42 42 61 47 47 47 61 61 53 61 47 47 46 53 47 47 47 53 61 61 61 61 61 61 53 61 47 47 39 53 50 53 47 46 53 53 47 47 53 53 47 38 53 53 53 53 53 57 50 53 43 47 53 53 52 38 45 57 57 36 53 43 42 42 47 53 45 38 52 47 47 53 47 32 47 30 52 23 47 47 36 47 37 32 21 18 28 43 30 38 47 45 45 57 52 45 43 32 25 42 45 53 52 38 40 37 42 47 43 39 20 45 38 50 53 50 38 47 32 32 32 45 45 50 37 47 42 40 32 37 32 38 47 52 42 37 45 43 29 39 21 45 21 52 50 46 36 34 31 30 29 37 53 45 27 31 41 42 50 47 26 57 30 53 53 28 38 43 47 16 30 42 42 39 32 47 43 27 36 43 23 22 35 53 30 52 24 34 42 37 37 47 57 35 53 40 35 52 24 22 48 40 20 52 57 57 57 53 27 32 40 42 21 30 42 57 23 8 37 27 23 29 23 14 18 12 21 8 11 46 32 37 41 23 19 33 29 34 28 33 40 22 25 27 8 14 22 17 33 27 19 22 25 45 25 34 6 15 14 5 5 15 9 10 12 8 10 7 15 19 15 29 14 6 10 7 8 10 30 30 24 28 14 16 14 13 10 30 18 22 10 19 29 23 12 17 27 13 5 24 11 21 14 8 29 17 6 26 6 9 13 17 20 25 15 9 6 28	Open. Hide. 61 61 55 47 61 55 28 36 15 25 25 34 43 44 37 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 59 61 61 61 59 59 59 55 55 59 59 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 59 61 61 59 61 59 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 59 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 59 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 59 61 59 61 59 59 61 61 61 61 61 61 59 61 61 61 61 59 52 45 59 59 61 61 61 61 61 61 61 61 59 52 61 61 61 61 61 59 61 61 61 61 59 61 61 61 59 61 61 61 61 59 61 61 59 61 59 59 59 59 61 61 59 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 59 61 61 61 61 59 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 59 59 59 59 59 61 61 61 59 43 59 59 59 59 59 59 45 41 41 39 49 61 61 59 61 59 61 59 59 59 59 59 39 61 59 52 59 59 59 59 61 61 61 61 61 59 59 59 43 49 59 61 59 59 52 43 59 59 61 59 61 59 61 59 59 52 52 49 49 43 52 49 36 36 37 16 35 29 49 52 55 55 55 61 61 61 61 61 52 52 55 61 61 61 55 49 61 55 61 61 55 61 55 52 52 52 52 52 55 52 55 55 61 55 34 55 52 52 49 52 52 55 55 61 61 55 13 25 15 23 15 32 61 50 61 55 61 61 61 61 15 22 19 10 7 12 24 47 38 47 55 61 61 55 43 38 38 37 49 50 43 50 55 61 55 55 50 49 43 50 50 39 61 61 61 55 61 47 13 17 13 11 14 12 39 50 53 50 50 50 53 47 14 26 47 50 50 50 50 52 53 53 61 53 61 53 50 37 45 35 43 35 53 61 35 13 24 10 11 32 61 50 28 45 42 24 38 28 29 38 25 17 32 12 45 50 43 61 24 43 35 50 37 17 13 50 27 47 40 39 41 50 47 35 50 22 28 18 12 19 24 11 19 13 14 16 14 12 31 8 20 30 13 11 21 14 47 47 46 43 42 45 17 32 30 27 10 22 20 29 16 46 42 45 30 53 45 30 42 35 57 43 22 53 52 53 52 39 24 30 43 47 36 38 27 33 45 34 53 30 17 21 43 16 57 36 11 39 53 28 23 19 14 9 14 30 53 25 23 35 39 50 28 30 30 30 20 30 38 41 38 32 10 10 5 10 7 12 27 19 19 12 29 24 10 32 37 39 52 17 34 47 40 37 12 32 20 28 25 20 19 21 38 39 5 30 27 11 42 52 28 57 17 17 57 46 17 17 21 21 23 16 30 21 9 28 24 24 20 9 32 45 42 13 50 45 6 34 20 14 6 23 18 8 28 11 23 12 12 11 25 24 25 30 15 32 22 29 53 30 17 31 9 35 24 33 11 12 7 12 23 16 29 16 20 14 14 13 10 16 24 33 24 24 20 19 18 15 25 12 20 5 15 10 12 8 14 11 17 4

Alignment Information

BAC End 1

BAC End 2

seq1: chr10_3035847_3036760
seq2: B6Ng01-132G16.b_46_961 (reverse)

seq1  TATCGGACTGAGCATGGGGA-CCCCAATGGAGG-AGTTAGGTGAAGGACT  48
      ||||||||||||||||| || |||||||||||| | ||||||||| ||||
seq2  TATCGGACTGAGCATGGAGACCCCCAATGGAGGAATTTAGGTGAA-GACT  49

seq1  GAAGGAGCAGAAGGGGTTTGCAACACCATAGGAA-GAGCAACTATCAACC  97
      | |||| || || ||||||||||| ||||||||| |||||||| ||||||
seq2  GTAGGAACAAAAAGGGTTTGCAACCCCATAGGAAGGAGCAACTTTCAACC  99

seq1  AACCAGACAGACCCCCACCACCACCACCAGAGCTCCCAAGGACTAAATCA  147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCAGACAGACCCCCACCACCACCACCAGAGCTCCCAAGGACTAAATCA  149

seq1  CCAACCAAAGAGCATACATGGTGGGACTTGTGGCTTCAGTTGCATATGTG  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACCAAAGAGCATACATGGTGGGACTTGTGGCTTCAGTTGCATATGTG  199

seq1  GCAGAGGATGGCATTGTCAGGCATCAATGTGAGGGGAGGCCCTTGGTCCT  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAGGATGGCATTGTCAGGCATCAATGTGAGGGGAGGCCCTTGGTCCT  249

seq1  GTGAAGGCTCTTTGTCCCAGTGTAGGGGAATGCCAGGGTAGTGAGACAGG  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAAGGCTCTTTGTCCCAGTGTAGGGGAATGCCAGGGTAGTGAGACAGG  299

seq1  AGTGGGTGGGTGGGTTGGTGGGGAGCTCCCTCAGAAGCAGGGTAAGGGGG  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGGTGGGTGGGTTGGTGGGGAGCTCCCTCAGAAGCAGGGTAAGGGGG  349

seq1  GATGGGATAGGGGGTTTGCAGAGGGGAAACAAGGAAAGGAGAAAACATTT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGGATAGGGGGTTTGCAGAGGGGAAACAAGGAAAGGAGAAAACATTT  399

seq1  GAAATATAAATAAATAACAAAATTTTAAAAAGAGTTTGTTCTCAACAGTA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATATAAATAAATAACAAAATTTTAAAAAGAGTTTGTTCTCAACAGTA  449

seq1  TGTCAAAGGACATCCTCTGAGGACAACTCTTACATAAACTAGAGCTTTGC  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCAAAGGACATCCTCTGAGGACAACTCTTACATAAACTAGAGCTTTGC  499

seq1  CAGGAGTCTTTCTCACGGCCTCCGATGGGCCAGCCTGTCCAGATGAACCA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAGTCTTTCTCACGGCCTCCGATGGGCCAGCCTGTCCAGATGAACCA  549

seq1  GGCTCCCTGTGCTGGCAGCAGTCCCCTGGCAACCTTAGGTCCTTAGCTAT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCCCTGTGCTGGCAGCAGTCCCCTGGCAACCTTAGGTCCTTAGCTAT  599

seq1  GAGTCCCAAGGATAACTATTAGCTAGAAAGCTGCTTCATCTGCCATCTCA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCCCAAGGATAACTATTAGCTAGAAAGCTGCTTCATCTGCCATCTCA  649

seq1  GAGAACCCTAAGGACCCTGAGCCACACCTGAGTGCACACAGAGCATCACA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAACCCTAAGGACCCTGAGCCACACCTGAGTGCACACAGAGCATCACA  699

seq1  GGCCATAGTTTTGGGTTTGGCAGTAACCTGGTTCCACATCCGTTGCCTGT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCATAGTTTTGGGTTTGGCAGTAACCTGGTTCCACATCCGTTGCCTGT  749

seq1  CTTAGGGTTTTACTGCTGTGAACAGACACCATGACCAAGGCAAGTCTTAT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGGGTTTTACTGCTGTGAACAGACACCATGACCAAGGCAAGTCTTAT  799

seq1  AAAGGACAACAACTAATTGGGGCTGGCTTACAGGGTTCAGAGGTTCAACC  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGACAACAACTAATTGGGGCTGGCTTACAGGGTTCAGAGGTTCAACC  849

seq1  CATTATCATCAAGGCAGGGAGCATGGCAGCATCCAGACAGGCATGGTGCA  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTATCATCAAGGCAGGGAGCATGGCAGCATCCAGACAGGCATGGTGCA  899

seq1  GGAGGTGCAGAGAATTC  914
      |||||||||||||||||
seq2  GGAGGTGCAGAGAATTC  916

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BAC

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Alignment Information