BAC Information

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BAC

Clone NameB6Ng01-132I14
Chromosome10 (Build37)
Map Location 31,133,174 - 31,134,292
singlet/doubletsinglet
Overlap geneTpd52l1, LOC100041294
Upstream geneTrmt11, Hint3, Ncoa7, LOC382354, Hey2, LOC654431, EG432448, Hddc2
Downstream geneIbrdc1, LOC666055, LOC667752, LOC100040638, Tcba1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-132I14.bB6Ng01-132I14.g
ACCDH933314DH933315
length1,2001,089
definitionDH933314|Mus musculus domesticus DNA, BAC clone: B6Ng01-132I14, 5' end.DH933315|Mus musculus domesticus DNA, BAC clone: B6Ng01-132I14, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctacactaaagccatctggtcctgggctgtttttggctttagggg
ttttttaatgacttcttgtatttatatagtttatctgctcttgatttaac
tttgatatgtggtatctgtctaggaaatcatccatttcatcggattttcc
agttttgttgagtataagcttttaaagtaggatctgatgatttttcaaat
ttgctcagtttctgctcttatggctcccttttcatttctgattttgttga
cttgggtaatgcctctggtccctttagttagttgattttctcaaagaaac
agcttttggttttgttgactttttctatagtcctctttgtttttattttg
ttgagttcagctctgaatttgactatttcctgtcatctactcctcttgag
tgtgtttacttctttttgttctagagttctcaggtgtgctgttaagctgc
tagtgtaggatctctgcaattctttaccaggacacttagtgctatgaagt
ttcctcttagcgctgctttcattgtgtcccatcagtttggatatgatgtg
tcttcattttcattgaattccaggaagtctttcatttctttttattactt
ctttgaccaagttatcattgagtagagagttgttcagtttccatgggtct
gtgggttttctgttggttttgttgttattgaagaccagccttaatctgtg
gtgatctgataggatgcatgggattatttcaatcttcttgtaatggttga
ggcttgttttctgactgactatatggtcaagattggagaaagtaccctga
ggtgctgagaagaagctatattctattgttttagggtgaaatgttctata
gctgtctgttaaatccatttgtttataacatctattagattcactgtgtc
tctatttagttttgtttcaatacctgtctatactgagagttggatgttga
agtctcccactattattgtttggggtcaatgtatactttgagcttagtaa
aagtttcttttatgatgtggtactttcataattgggacagatgtcagact
gagaactttcctctggaggattttccttgaatgaattgtgatctttcctc
atcccattgtaactcggttaagtcattttaatggatatagagaacactgt
ttggacattgctgcaaacattttcacccttaattctaagagagtgcgtac

gaattcaaacacagtaactagaaaataaatttggaagttttatatacatt
ttaggtacaaaaagggatcaataaaaattatttttaaattgattttttta
ttaaactaatgaaatttacttaaaaatatacaactcagtattaacatttt
taagtcatcaaaataatttatagtagttaaatgcctcttaaatatacatg
atatcttctgaagctaagactaatacacactcaaccagttttaaaaatct
atttggaacattaaacatgatagaagtagaaaaaagcggctggaggaacc
tgtgttgtcgcatcggtgaggatggccctggagacggtaccgaaggacct
gcggcatctgcgggcttgtttgctgtgctcgttagtcaagactatagacc
agtttgaatatgatgggtgtgacaattgcgatgcatacctacaaatgaag
ggcaacagagagatggtttatgactgcaccagctcttcatttgatggaat
caatgcgatgatgagtccagaggacagctgggtctccaagtggcagcgag
tcagtaactttaagccaggtgtatatgctgtgtccgtcactggtcgcctg
ccccaaggaatcgtgcgggagctgaaaagtcgaggagtggcctacaaatc
cagagacacagcaataaagacctagctaggtgcaggccatagcatcttgt
tcttcacttctgtacttgttttcttgtggaactaaaccggtgggacccca
aagactccccgccctccatctccgaatcagcagactcctcgaaagcagca
catcggccttaagtcatctcactttctctgcccactggtgaagtgggagt
gtctgggcggattctcagaggctgtgtcaacagaggaagatgctgatttc
ccacctgtgttcaggtttgcctttgtctatgggcaggactttgggtcaat
accaataagcgagctttggaacattgaagaaaaaaaaaaagagtagaaaa
aatcttcttatgagtcttgtttgaagaaattgacagatctgattagacag
aaccatccattccaaggaaatacagggtaatggtaatgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_31133174_31134292
seq2: B6Ng01-132I14.g_69_1157 (reverse)

seq1  ACATTACCCATTTACACTGTATTTTCCCTTGGAGATGGAATGGTTTCTGT  50
      ||||||||   |||| ||||||||  ||||||| |||| |||| ||||||
seq2  ACATTACC--ATTACCCTGTATTT--CCTTGGA-ATGG-ATGG-TTCTGT  43

seq1  CTAATCAGGATCTTGTCAAAATTTTCTTTCATACAGAACTTCATAAGAGA  100
      ||||||| |||| ||||||   |||| |||| |||  || ||||||||  
seq2  CTAATCA-GATC-TGTCAA---TTTC-TTCAAACAAGAC-TCATAAGAAG  86

seq1  TTTTTTTCTACTTCTTTTTTTTTTTTTTTTTTTTTTTTTAATGTTCCAAA  150
       ||||||||||           | ||||||||||| || |||||||||||
seq2  ATTTTTTCTAC-----------TCTTTTTTTTTTTCTTCAATGTTCCAAA  125

seq1  GGCTCGCTTTATTGGTATTTGAACCAAAGTCCTGCCCATAGACAAAGGCA  200
       |||||| ||||||||| |||| |||||||||||||||||||||||||||
seq2  -GCTCGC-TTATTGGTA-TTGACCCAAAGTCCTGCCCATAGACAAAGGCA  172

seq1  AAACCCTGAACACAGGTGGGAAATCAGCATCTTCCTCTGTTGACACAGCC  250
      ||  ||||||||||||||||||||||||||||||||||||||||||||||
seq2  AA--CCTGAACACAGGTGGGAAATCAGCATCTTCCTCTGTTGACACAGCC  220

seq1  TCTGAGAATCCGCCCAGACACTCCCACTTCACCAGTGGGCAGAGAAAGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAGAATCCGCCCAGACACTCCCACTTCACCAGTGGGCAGAGAAAGTG  270

seq1  AGATGACTTAAGGCCGATGTGCTGCTTTCGAGGAGTCTGCTGATTCGGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGACTTAAGGCCGATGTGCTGCTTTCGAGGAGTCTGCTGATTCGGAG  320

seq1  ATGGAGGGCGGGGAGTCTTTGGGGTCCCACCGGTTTAGTTCCACAAGAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAGGGCGGGGAGTCTTTGGGGTCCCACCGGTTTAGTTCCACAAGAAA  370

seq1  ACAAGTACAGAAGTGAAGAACAAGATGCTATGGCCTGCACCTAGCTAGGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGTACAGAAGTGAAGAACAAGATGCTATGGCCTGCACCTAGCTAGGT  420

seq1  CTTTATTGCTGTGTCTCTGGATTTGTAGGCCACTCCTCGACTTTTCAGCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTATTGCTGTGTCTCTGGATTTGTAGGCCACTCCTCGACTTTTCAGCT  470

seq1  CCCGCACGATTCCTTGGGGCAGGCGACCAGTGACGGACACAGCATATACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCGCACGATTCCTTGGGGCAGGCGACCAGTGACGGACACAGCATATACA  520

seq1  CCTGGCTTAAAGTTACTGACTCGCTGCCACTTGGAGACCCAGCTGTCCTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGCTTAAAGTTACTGACTCGCTGCCACTTGGAGACCCAGCTGTCCTC  570

seq1  TGGACTCATCATCGCATTGATTCCATCAAATGAAGAGCTGGTGCAGTCAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACTCATCATCGCATTGATTCCATCAAATGAAGAGCTGGTGCAGTCAT  620

seq1  AAACCATCTCTCTGTTGCCCTTCATTTGTAGGTATGCATCGCAATTGTCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCATCTCTCTGTTGCCCTTCATTTGTAGGTATGCATCGCAATTGTCA  670

seq1  CACCCATCATATTCAAACTGGTCTATAGTCTTGACTAACGAGCACAGCAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCATCATATTCAAACTGGTCTATAGTCTTGACTAACGAGCACAGCAA  720

seq1  ACAAGCCCGCAGATGCCGCAGGTCCTTCGGTACCGTCTCCAGGGCCATCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGCCCGCAGATGCCGCAGGTCCTTCGGTACCGTCTCCAGGGCCATCC  770

seq1  TCACCGATGCGACAACACAGGTTCCTCCAGCCGCTTTTTTCTACTTCTAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCGATGCGACAACACAGGTTCCTCCAGCCGCTTTTTTCTACTTCTAT  820

seq1  CATGTTTAATGTTCCAAATAGATTTTTAAAACTGGTTGAGTGTGTATTAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTTTAATGTTCCAAATAGATTTTTAAAACTGGTTGAGTGTGTATTAG  870

seq1  TCTTAGCTTCAGAAGATATCATGTATATTTAAGAGGCATTTAACTACTAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAGCTTCAGAAGATATCATGTATATTTAAGAGGCATTTAACTACTAT  920

seq1  AAATTATTTTGATGACTTAAAAATGTTAATACTGAGTTGTATATTTTTAA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTATTTTGATGACTTAAAAATGTTAATACTGAGTTGTATATTTTTAA  970

seq1  GTAAATTTCATTAGTTTAATAAAAAAATCAATTTAAAAATAATTTTTATT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAATTTCATTAGTTTAATAAAAAAATCAATTTAAAAATAATTTTTATT  1020

seq1  GATCCCTTTTTGTACCTAAAATGTATATAAAACTTCCAAATTTATTTTCT  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCCCTTTTTGTACCTAAAATGTATATAAAACTTCCAAATTTATTTTCT  1070

seq1  AGTTACTGTGTTTGAATTC  1119
      |||||||||||||||||||
seq2  AGTTACTGTGTTTGAATTC  1089