BAC Information

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BAC

Clone NameB6Ng01-132K23
Chromosome10 (Build37)
Map Location 71,705,963 - 71,813,588
singlet/doubletdoublet
Overlap geneLOC100040505
Upstream geneUbe2d1, LOC665472, Zcd1, Ipmk, LOC100039860, LOC216081, EG216082, LOC622812, EG327767, 1700049L16Rik
Downstream geneZwint, LOC432471, LOC544705
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-132K23.bB6Ng01-132K23.g
ACCDH933423DH933424
length7131,128
definitionDH933423|Mus musculus domesticus DNA, BAC clone: B6Ng01-132K23, 5' end.DH933424|Mus musculus domesticus DNA, BAC clone: B6Ng01-132K23, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(71,812,876 - 71,813,588)(71,705,963 - 71,707,098)
sequence
gaattccaggttgtgttggactgtctcctgaaaccatgaactagaacaaa
ctttttatttcttgggttgcttcttattatgttacagtgacaagaaatgc
cacgaatctatgaaacccttcagtcactggttggtatttcagcacctacc
atgatgaactgccacaaaaacctaaaacattaacagaaggtgagcccagc
cagccaagtcctagccagaaacactttatatgctgatagtgaggatgtgt
tacatccataaactagaaaacaaatgaacaagtaattaagaaaggctggt
acagttttccattgtggcatttgaagcaaaagcctagacagtcgagttca
atgtctcttaatctggtctctcctgaagaaaatgcttattgaaatttacc
aactaaatctcaacagctcttgtcattcaaatactttttccatttccaac
tgattcttggaaccagggaattatcatgcagatggagttgtttggtgaag
acttaatgtgttttctttttagaagctttccctgaggaatttcatgagaa
ccaagaggaatgcaaagcataaatgagttgttagcattcagagctcttct
ctgcctccattctttgctaccagggtgtgcaataaacctcactatcccca
ctcaattaaaggaggaggaagagaaagaggggaatgagaaagaagaggag
gaggaggagggag
gaattcctcctgtgtaatgtcctctggaaatggaaatagttttcctgtgg
aaaagggtagattgggaaatggtcacctcctcctcgtcttaggcaatgct
gttccatatgtaaggatctgggtgcttagactgtaaagatcctgtttcct
cttccctccatgttgtcctcatgaaatagctcgcttttcacaccttgtct
gtgcctgaggtggttcagaaactcacttggaacttgacatttgaggacac
tcctattcatctctgtcacttagtagaaagacatctttgtcaaaatacat
taactgtgaactttttgtgagagctacagcacacaattggtgttagatga
tgtgcaggcatgttcatattagattattattgcctgagtggaatgtaaga
gtggaaaatgtgatcccctgctttctgtttggtttagtttgctttccttc
ttcttttgtttccataagtcattggtacagagaggatacattagagacta
atttatctactatctgaaactactgggggagggcatctttagcaaccatt
ttaataccctttccatgaactaagcctgtggcagggagccaatttcttgt
agggtctgtatggtcagtctgcaatgtcactaggcagtgatcttcaagaa
ctgtcttcacaattaatggccatagtgagcaggggttttctgtgtgtgct
ttccaacagaagtgtcctgtaagcccttcagaatttgcctggctagaatc
tgctgtagtctcaacatggagacatatatcctctgaatctgtcctacaca
aagactcatactcagctctataataaataactttttctgacttgcatcta
aaatacaattttactttctgttcttttaaattcctttctaggtctcttcc
tggctttggaagaacattatttgtactgacaccaaacagccagaggataa
aatagaagatattatgtgggcctttcccccttctatcctttatgaattaa
ataataattggggctgatttacacaagaattggcattagcataagaaaac
tttgaagttgagctgaaccaataaatctgggtaaaacagcttcattgaca
aatatgggcaagaacttctgccaatgag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_71812876_71813588
seq2: B6Ng01-132K23.b_50_762 (reverse)

seq1  CTCCCTCCTCCTCCTCCTCTTCTTTCTCATTCCCCTCTTTCTCTTCCTCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCTCCTCCTCCTCCTCTTCTTTCTCATTCCCCTCTTTCTCTTCCTCC  50

seq1  TCCTTTAATTGAGTGGGGATAGTGAGGTTTATTGCACACCCTGGTAGCAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTAATTGAGTGGGGATAGTGAGGTTTATTGCACACCCTGGTAGCAA  100

seq1  AGAATGGAGGCAGAGAAGAGCTCTGAATGCTAACAACTCATTTATGCTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATGGAGGCAGAGAAGAGCTCTGAATGCTAACAACTCATTTATGCTTT  150

seq1  GCATTCCTCTTGGTTCTCATGAAATTCCTCAGGGAAAGCTTCTAAAAAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTCCTCTTGGTTCTCATGAAATTCCTCAGGGAAAGCTTCTAAAAAGA  200

seq1  AAACACATTAAGTCTTCACCAAACAACTCCATCTGCATGATAATTCCCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACACATTAAGTCTTCACCAAACAACTCCATCTGCATGATAATTCCCTG  250

seq1  GTTCCAAGAATCAGTTGGAAATGGAAAAAGTATTTGAATGACAAGAGCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCAAGAATCAGTTGGAAATGGAAAAAGTATTTGAATGACAAGAGCTG  300

seq1  TTGAGATTTAGTTGGTAAATTTCAATAAGCATTTTCTTCAGGAGAGACCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGATTTAGTTGGTAAATTTCAATAAGCATTTTCTTCAGGAGAGACCA  350

seq1  GATTAAGAGACATTGAACTCGACTGTCTAGGCTTTTGCTTCAAATGCCAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTAAGAGACATTGAACTCGACTGTCTAGGCTTTTGCTTCAAATGCCAC  400

seq1  AATGGAAAACTGTACCAGCCTTTCTTAATTACTTGTTCATTTGTTTTCTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGAAAACTGTACCAGCCTTTCTTAATTACTTGTTCATTTGTTTTCTA  450

seq1  GTTTATGGATGTAACACATCCTCACTATCAGCATATAAAGTGTTTCTGGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTATGGATGTAACACATCCTCACTATCAGCATATAAAGTGTTTCTGGC  500

seq1  TAGGACTTGGCTGGCTGGGCTCACCTTCTGTTAATGTTTTAGGTTTTTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGACTTGGCTGGCTGGGCTCACCTTCTGTTAATGTTTTAGGTTTTTGT  550

seq1  GGCAGTTCATCATGGTAGGTGCTGAAATACCAACCAGTGACTGAAGGGTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGTTCATCATGGTAGGTGCTGAAATACCAACCAGTGACTGAAGGGTT  600

seq1  TCATAGATTCGTGGCATTTCTTGTCACTGTAACATAATAAGAAGCAACCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAGATTCGTGGCATTTCTTGTCACTGTAACATAATAAGAAGCAACCC  650

seq1  AAGAAATAAAAAGTTTGTTCTAGTTCATGGTTTCAGGAGACAGTCCAACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAATAAAAAGTTTGTTCTAGTTCATGGTTTCAGGAGACAGTCCAACA  700

seq1  CAACCTGGAATTC  713
      |||||||||||||
seq2  CAACCTGGAATTC  713

seq1: chr10_71705963_71707098
seq2: B6Ng01-132K23.g_66_1193

seq1  GAATTCCTCCTGTGTAATGTCCTCTGGAAATGGAAATAGTTTTCCTGTGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTCCTGTGTAATGTCCTCTGGAAATGGAAATAGTTTTCCTGTGG  50

seq1  AAAAGGGTAGATTGGGAAATGGTCACCTCCTCCTCGTCTTAGGCAATGCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGGGTAGATTGGGAAATGGTCACCTCCTCCTCGTCTTAGGCAATGCT  100

seq1  GTTCCATATGTAAGGATCTGGGTGCTTAGACTGTAAAGATCCTGTTTCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCATATGTAAGGATCTGGGTGCTTAGACTGTAAAGATCCTGTTTCCT  150

seq1  CTTCCCTCCATGTTGTCCTCATGAAATAGCTCGCTTTTCACACCTTGTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCCTCCATGTTGTCCTCATGAAATAGCTCGCTTTTCACACCTTGTCT  200

seq1  GTGCCTGAGGTGGTTCAGAAACTCACTTGGAACTTGACATTTGAGGACAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCCTGAGGTGGTTCAGAAACTCACTTGGAACTTGACATTTGAGGACAC  250

seq1  TCCTATTCATCTCTGTCACTTAGTAGAAAGACATCTTTGTCAAAATACAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTATTCATCTCTGTCACTTAGTAGAAAGACATCTTTGTCAAAATACAT  300

seq1  TAACTGTGAACTTTTTGTGAGAGCTACAGCACACAATTGGTGTTAGATGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTGTGAACTTTTTGTGAGAGCTACAGCACACAATTGGTGTTAGATGA  350

seq1  TGTGCAGGCATGTTCATATTAGATTATTATTGCCTGAGTGGAATGTAAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCAGGCATGTTCATATTAGATTATTATTGCCTGAGTGGAATGTAAGA  400

seq1  GTGGAAAATGTGATCCCCTGCTTTCTGTTTGGTTTAGTTTGCTTTCCTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGAAAATGTGATCCCCTGCTTTCTGTTTGGTTTAGTTTGCTTTCCTTC  450

seq1  TTCTTTTGTTTCCATAAGTCATTGGTACAGAGAGGATACATTAGAGACTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTTGTTTCCATAAGTCATTGGTACAGAGAGGATACATTAGAGACTA  500

seq1  ATTTATCTACTATCTGAAACTACTGGGGGAGGGCATCTTTAGCAACCATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATCTACTATCTGAAACTACTGGGGGAGGGCATCTTTAGCAACCATT  550

seq1  TTAATACCCTTTCCATGAACTAAGCCTGTGGCAGGGAGCCAATTTCTTGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATACCCTTTCCATGAACTAAGCCTGTGGCAGGGAGCCAATTTCTTGT  600

seq1  AGGGTCTGTATGGTCAGTCTGCAATGTCACTAGGCAGTGATCTTCAAGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTCTGTATGGTCAGTCTGCAATGTCACTAGGCAGTGATCTTCAAGAA  650

seq1  CTGTCTTCACAATTAATGGCCATAGTGAGCAGGGGTTTTCTGTGTGTGCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCTTCACAATTAATGGCCATAGTGAGCAGGGGTTTTCTGTGTGTGCT  700

seq1  TTCCAACAGAAGTGTCCTGTAAGCCCTTCAGAATTTGCCTGGCTAGAATC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAACAGAAGTGTCCTGTAAGCCCTTCAGAATTTGCCTGGCTAGAATC  750

seq1  TGCTGTAGTCTCAACATGGAGACATATATCCTCTGAATCTGTCCTACACA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGTAGTCTCAACATGGAGACATATATCCTCTGAATCTGTCCTACACA  800

seq1  AAGACTCATACTCAGCTCTATAATAAATAACTTTTTCTGACTTGCATCTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACTCATACTCAGCTCTATAATAAATAACTTTTTCTGACTTGCATCTA  850

seq1  AAATACAATTTTACTTTCTGTTTCTTTTAAATTCCTTTCTAGGTCTCTTC  900
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  AAATACAATTTTACTTTCTG-TTCTTTTAAATTCCTTTCTAGGTCTCTTC  899

seq1  CTGGCTTTGGAAGAACATTATTTGTACTGACACCAAACAGCCAGAGGATA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCTTTGGAAGAACATTATTTGTACTGACACCAAACAGCCAGAGGATA  949

seq1  AAATAGAAGAATATTATGTGGGCCTTTCCCCCCTTCTAATCCTTTATTGA  1000
      ||||||||| ||||||||||||||||| ||||||||| |||||||| |||
seq2  AAATAGAAG-ATATTATGTGGGCCTTT-CCCCCTTCT-ATCCTTTA-TGA  995

seq1  ATTAAATTATAATTGGGGCTGATTTACAC-AGAATTGGCATTTAGCAT-A  1048
      ||||||| ||||||||||||||||||||| |||||||||| ||||||| |
seq2  ATTAAATAATAATTGGGGCTGATTTACACAAGAATTGGCA-TTAGCATAA  1044

seq1  GAAAACTTTAGAGTTGAGGCTGAAACAATAAATCTTGTGGTAAAACAGC-  1097
      |||||||||  |||||| |||||| ||||||||||   ||||||||||| 
seq2  GAAAACTTTGAAGTTGA-GCTGAACCAATAAATCT--GGGTAAAACAGCT  1091

seq1  TCA-TGACAAATAGGGGGAAAGGACTTTCTGCCAAATGAG  1136
      ||| ||||||||| ||| ||  ||  ||||||| ||||||
seq2  TCATTGACAAATATGGGCAA--GAACTTCTGCC-AATGAG  1128