BAC Information

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BAC

Clone NameB6Ng01-132N11
Chromosome10 (Build37)
Map Location 97,523,788 - 97,524,921
singlet/doubletsinglet
Overlap genenone
Upstream geneEG667407, Dcn, Lum, Kera, Epyc, 4921510H08Rik
Downstream geneEG667438, EG432494, Atp2b1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-132N11.bB6Ng01-132N11.g
ACCDH933543DH933544
length1,2161,121
definitionDH933543|Mus musculus domesticus DNA, BAC clone: B6Ng01-132N11, 5' end.DH933544|Mus musculus domesticus DNA, BAC clone: B6Ng01-132N11, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccaactttaacaacaaaaataacaggaagcaacaattacttttcc
ttaatatctcttaacatcaatggtctcaactccccaataaaaagacatag
actaacaaactggctacacaaacaagacccaacattttgctgtttacagg
agacacatctcagagaaaaaggtagacactacctcagaataaaaggctgg
aaaacaattttccaagcaaatggtatgaagaaacaagctggagtagccat
cctaatatctgataagattgacttccaacccaaagtcatcaaaaaagaca
aggaggggcacttcgttcttatcaaaggtaaaatcctccaagaggaactc
tcaattctgaatatctatgctccaaatacaagggcagccacattcattaa
agaaactttagtaaagctcaaagcacacattgcacctcacacaataatag
tgggagacttcaacacaccactttcaccaatggacagatcatggaaacag
aaactaaacagggacacacagaaactaacagaagtgatgaaacaaatgga
tctgacagatatctacagaacattttatcctaaaacaaaaggatatacct
tcttctcagcacctcatggtaccttctccaaaattgaccacataataggt
cacaaaacaggcctcaacagattcaaaaatattgaaattgtcccatgtat
cctatcagatcaccatgcactaaggctgatcttcaataacaaaaaaaaaa
aataacagaaagccaacactcacgtggaaactgaacaacactcttctcaa
tgataccttggtcaaggaaaggaataaagaaagaaattaaagacttttta
gagtttaatgaaaatgaagccacaacgtacccaaacctttgggacacaat
gaaagcatttctaaaagggaaactaactcatagctctgagtgcctccatg
aagaacgggagagagcacatactagcagcttgacaacacatctaaaagct
ctagacaaaagagcaattcacccagaggagtagatgcagaatatcaactc
agggtgaatcacagtgaaacagagactattcaagataccacgagggtgtc
ttgagaaaatcacagatagataatcctacctgacttctaaggccaagaat
tatctgatacaatcgactggaaaggacataaccagatctgaaaaatccaa
aacacctcatggatct
gaattcattaactatttatagcagtagctacttgtattgagcagaagcaa
gactagctttatcaacagtcagtcaagtaagaggcagctgggctcacagg
atcctttatttctgagctattggttatccatagactctaagagaaaggga
gtcgttatctttagttgcttatgcatcactgagccaaggaggctccatgt
gatagctcgaaactcataatcaaatatctgtcttcagttcctttcagtgg
attacaaaacagatgaatctgaatgtgtgagagagacatttgtgaggaaa
ttgtggttgaccatatcctctctggacatcatacacagtacaacatattt
aaaaccaaccttaattcaacagtatatgttaaagcatgtccaagtatgtg
tgaaagtcaaagcttgtaatcctagcacttaggggctgagacataaggtt
ccccatggctctgaggttgtgttcttatgcatagtgtgtttcaggccatc
ctggcttgtacagggagaagcaaccatcaaacaaataacaacaaaaccct
agaatcctagtttctattccatcttagcgaaagttgtgtattttaaaaat
aaaagtgttagcttcatgtaattataagcactgggtaacagtgacgtgga
gatccagttaagcatggcagaatttggaaatactatataaaggaagttat
ctgaagacctaaacttaaacaggaggtggaatatgccatggggatataat
caaaagcttcttagacctgtgtctatgcactatccgctgtacttgtctgg
gttttctaatccatagtggtctcactttaaacacagtggtatcccttctc
acttagtaagttttgtatgtctgtgtcagagatttaagccagtgtgtttg
tgtagcctaacacatcttcaaacacaaagatatattcctatgtactaacg
aatatggattaaatgacccactaccaacaaatcataaactgtgaagacta
taagatcaaatcctgactgacttcttgagacacccatgataagtaatact
agcctagattttaagaacaatactatgatgagctttttcttcatgttagt
tattttccattttcataaaac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_97523788_97524921
seq2: B6Ng01-132N11.g_69_1189

seq1  GAATTCATTAACTATTTATAGCAGTAGCTACTTGTATTGAGCAGAAGCAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTAACTATTTATAGCAGTAGCTACTTGTATTGAGCAGAAGCAA  50

seq1  GACTAGCTTTATCAACAGTCAGTCAAGTAAGAGGCAGCTGGGCTCACAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTAGCTTTATCAACAGTCAGTCAAGTAAGAGGCAGCTGGGCTCACAGG  100

seq1  ATCCTTTATTTCTGAGCTATTGGTTATCCATAGACTCTAAGAGAAAGGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTTTATTTCTGAGCTATTGGTTATCCATAGACTCTAAGAGAAAGGGA  150

seq1  GTCGTTATCTTTAGTTGCTTATGCATCACTGAGCCAAGGAGGCTCCATGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCGTTATCTTTAGTTGCTTATGCATCACTGAGCCAAGGAGGCTCCATGT  200

seq1  GATAGCTCGAAACTCATAATCAAATATCTGTCTTCAGTTCCTTTCAGTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGCTCGAAACTCATAATCAAATATCTGTCTTCAGTTCCTTTCAGTGG  250

seq1  ATTACAAAACAGATGAATCTGAATGTGTGAGAGAGACATTTGTGAGGAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACAAAACAGATGAATCTGAATGTGTGAGAGAGACATTTGTGAGGAAA  300

seq1  TTGTGGTTGACCATATCCTCTCTGGACATCATACACAGTACAACATATTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGGTTGACCATATCCTCTCTGGACATCATACACAGTACAACATATTT  350

seq1  AAAACCAACCTTAATTCAACAGTATATGTTAAAGCATGTCCAAGTATGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACCAACCTTAATTCAACAGTATATGTTAAAGCATGTCCAAGTATGTG  400

seq1  TGAAAGTCAAAGCTTGTAATCCTAGCACTTAGGGGCTGAGACATAAGGTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAGTCAAAGCTTGTAATCCTAGCACTTAGGGGCTGAGACATAAGGTT  450

seq1  CCCCATGGCTCTGAGGTTGTGTTCTTATGCATAGTGTGTTTCAGGCCATC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCATGGCTCTGAGGTTGTGTTCTTATGCATAGTGTGTTTCAGGCCATC  500

seq1  CTGGCTTGTACAGGGAGAAGCAACCATCAAACAAATAACAACAAAACCCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCTTGTACAGGGAGAAGCAACCATCAAACAAATAACAACAAAACCCT  550

seq1  AGAATCCTAGTTTCTATTCCATCTTAGCGAAAGTTGTGTATTTTAAAAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATCCTAGTTTCTATTCCATCTTAGCGAAAGTTGTGTATTTTAAAAAT  600

seq1  AAAAGTGTTAGCTTCATGTAATTATAAGCACTGGGTAACAGTGACGTGGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGTGTTAGCTTCATGTAATTATAAGCACTGGGTAACAGTGACGTGGA  650

seq1  GATCCAGTTAAGCATGGCAGAATTTGGAAATACTATATAAAGGAAGTTAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCCAGTTAAGCATGGCAGAATTTGGAAATACTATATAAAGGAAGTTAT  700

seq1  CTGAAGACCTAAACTTAAACAGGAGGTGGAATATGCCATGGGGATATAAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAGACCTAAACTTAAACAGGAGGTGGAATATGCCATGGGGATATAAT  750

seq1  CAAAAGCTTCTTAGACCTGTGTCTATGCACTATCCGCTGTACTTGTCTGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAGCTTCTTAGACCTGTGTCTATGCACTATCCGCTGTACTTGTCTGG  800

seq1  GTTTTCTAATCCATAGTGGTCTCACTTTAAACACAGTGGTATCCCTTCTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTCTAATCCATAGTGGTCTCACTTTAAACACAGTGGTATCCCTTCTC  850

seq1  ACTTAGTAAGTTTTGTATGTCTGTGTCAGAGATTTAAGCCAGTGTGTTTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTAGTAAGTTTTGTATGTCTGTGTCAGAGATTTAAGCCAGTGTGTTTG  900

seq1  TGTAGCCTAAACACATCTTCAAACACAAAGATATATTCCTATGTACTAAC  950
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGCCT-AACACATCTTCAAACACAAAGATATATTCCTATGTACTAAC  949

seq1  GAATATGGATTAAATGACCCACTACCAACAAAATCATAAACTGTTGACAG  1000
      ||||||||||||||||||||||||||||| ||||||||||||| ||| ||
seq2  GAATATGGATTAAATGACCCACTACCAAC-AAATCATAAACTG-TGA-AG  996

seq1  ACTATAAGGATCAAATCCTGACTGAC-TCTTGAGACACCCATGATTAGTT  1049
      ||||||| |||||||||||||||||| |||||||||||||||||| ||| 
seq2  ACTATAA-GATCAAATCCTGACTGACTTCTTGAGACACCCATGATAAGT-  1044

seq1  AATTACTAGCCTAGATTTTAAAGAACAAATACTAATGATGAGCTTTTTCT  1099
       | |||||||||||||||| |||||| |||||| ||||||||||||||||
seq2  -AATACTAGCCTAGATTTT-AAGAAC-AATACT-ATGATGAGCTTTTTCT  1090

seq1  TCAATGTTAGTTTATTTTTCCATTTTTCATAAAAC  1134
      || |||||||||   ||||||| ||||||||||||
seq2  TC-ATGTTAGTT--ATTTTCCA-TTTTCATAAAAC  1121