BAC Information

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BAC

Clone NameB6Ng01-133C02
Chromosome10 (Build37)
Map Location 114,128,147 - 114,128,826
singlet/doubletsinglet
Overlap geneTrhde
Upstream geneLOC100042666
Downstream gene4930473D10Rik, Tph2, Tbc1d15, LOC668041, Rab21, Tmem19, Thap2, Ccdc131, Lgr5, A930009A15Rik, LOC668071
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-133C02.bB6Ng01-133C02.g
ACCDH933760DH933761
length1,186680
definitionDH933760|Mus musculus domesticus DNA, BAC clone: B6Ng01-133C02, 5' end.DH933761|Mus musculus domesticus DNA, BAC clone: B6Ng01-133C02, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattatcccc
tatctgatttaggataagtaaagatcctttcccaatctgttggtggtcct
tttgtcctattgacggtgtcttttgccttgcagaaactttggagtttcat
gaggtcccatttgtcaattcttgatcttacagtacaagccattgctgttc
tgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccact
ttctcctctataagtttcagtgtctctggttttatgtgaagttccttgat
ccacttagatttgaccttagtacaaggagataagtatggatcgattcgca
ttcttctacatgataacaaccagttgtgccagcactaattgttgaaaatg
ctgtctttcttccactggatggttttagctcccttgttgaagatcaagtg
accataggtgtgtgggttcatttctgggtcttcaattctgttccattggt
ctacttgtctgtctctataccagtaccatgcagtttttatcacaattgct
ctgtagtaaagctttaggtcaggtatggtgattccaccagaggttctttt
atccttgagaaaagttcttgctatcctcggttttttgttattccagatga
atttgcaaatttctccttctaattcgttgaagaattgagttggaattttg
atggggattgcattgaatctgtagattgcttttggcaagatagccatttt
tacaatgttgatcctgccaatccatgagcatgggagatctttccatcttc
tgagatcttctttaatttctttcttcagagacttgaagtttttatcatat
agatctttcacttccttagttagagtcacgctgagatattttatattatt
ttgggactattgagaggtgtgttccctaatttcttctcagctgttaatct
tgtgtagagaaggccatgactgttggagttaattaattccagctactcac
cgagctgtatcagagttaggagtactctgtgggaattttaggcactatat
aacttcatctactcgcaaaagggattgaacttcgcttcaatggatgcctt
gtacctctttggtgccgaatggcctggctaaacttc
gaattcattacctgcccgccacagaatgcgattggagagggagcacgagt
gttttgccacaagatttttctctccttaaggagattgtgggtatgctgag
ggagagacagtatttgtggggatgaaagtaaatttgatacccacaaagca
taaaatataatccagcgctttagtcttaaaaggtaatatttaatagcact
ttaaatgaagagtgtgagttctgcgttacagccatgaaaggttcttacag
agaagcctccactttgtgagaacccagaggcgagtggtgggtaagaaagg
cgaaagatcattctagagattgtgtaaggcaggtgcccacgcatacctgg
gacgctgtaaaccacactaacgagaacacattttctagactggaataaat
aagtagtgggataaacttttcctttttttggttgttgttttttgagacag
ggtttctctgtatagccctggctgtcctggaactcactttgtggaccagg
caggccttgaactcagaaatctgcctgcctctgcctcctgagtgctgggc
ttaaaggcgtgcgccaccactgcctggctgataagttttattagagttca
ggaacaagacattctggtttgaatgataggtttttgtttatgtactaata
gaaataccagatttgtgtgtgtgtgtgtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_114128147_114128826
seq2: B6Ng01-133C02.g_66_745 (reverse)

seq1  ACACACACACACACACAAATCTGGTATTTCTATTAGTACATAAACAAAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACACACAAATCTGGTATTTCTATTAGTACATAAACAAAAA  50

seq1  CCTATCATTCAAACCAGAATGTCTTGTTCCTGAACTCTAATAAAACTTAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATCATTCAAACCAGAATGTCTTGTTCCTGAACTCTAATAAAACTTAT  100

seq1  CAGCCAGGCAGTGGTGGCGCACGCCTTTAAGCCCAGCACTCAGGAGGCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCAGGCAGTGGTGGCGCACGCCTTTAAGCCCAGCACTCAGGAGGCAG  150

seq1  AGGCAGGCAGATTTCTGAGTTCAAGGCCTGCCTGGTCCACAAAGTGAGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAGGCAGATTTCTGAGTTCAAGGCCTGCCTGGTCCACAAAGTGAGTT  200

seq1  CCAGGACAGCCAGGGCTATACAGAGAAACCCTGTCTCAAAAAACAACAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGACAGCCAGGGCTATACAGAGAAACCCTGTCTCAAAAAACAACAAC  250

seq1  CAAAAAAAGGAAAAGTTTATCCCACTACTTATTTATTCCAGTCTAGAAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAAAAGGAAAAGTTTATCCCACTACTTATTTATTCCAGTCTAGAAAA  300

seq1  TGTGTTCTCGTTAGTGTGGTTTACAGCGTCCCAGGTATGCGTGGGCACCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTTCTCGTTAGTGTGGTTTACAGCGTCCCAGGTATGCGTGGGCACCT  350

seq1  GCCTTACACAATCTCTAGAATGATCTTTCGCCTTTCTTACCCACCACTCG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTACACAATCTCTAGAATGATCTTTCGCCTTTCTTACCCACCACTCG  400

seq1  CCTCTGGGTTCTCACAAAGTGGAGGCTTCTCTGTAAGAACCTTTCATGGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTGGGTTCTCACAAAGTGGAGGCTTCTCTGTAAGAACCTTTCATGGC  450

seq1  TGTAACGCAGAACTCACACTCTTCATTTAAAGTGCTATTAAATATTACCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAACGCAGAACTCACACTCTTCATTTAAAGTGCTATTAAATATTACCT  500

seq1  TTTAAGACTAAAGCGCTGGATTATATTTTATGCTTTGTGGGTATCAAATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAGACTAAAGCGCTGGATTATATTTTATGCTTTGTGGGTATCAAATT  550

seq1  TACTTTCATCCCCACAAATACTGTCTCTCCCTCAGCATACCCACAATCTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTTCATCCCCACAAATACTGTCTCTCCCTCAGCATACCCACAATCTC  600

seq1  CTTAAGGAGAGAAAAATCTTGTGGCAAAACACTCGTGCTCCCTCTCCAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAGGAGAGAAAAATCTTGTGGCAAAACACTCGTGCTCCCTCTCCAAT  650

seq1  CGCATTCTGTGGCGGGCAGGTAATGAATTC  680
      ||||||||||||||||||||||||||||||
seq2  CGCATTCTGTGGCGGGCAGGTAATGAATTC  680