BAC Information

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BAC

Clone NameB6Ng01-133G13
Chromosome10 (Build37)
Map Location 89,234,292 - 89,235,359
singlet/doubletsinglet
Overlap geneE030041M21Rik
Upstream geneUtp20, Slc5a8, Tmem16d, Gas2l3, Nr1h4, EG627532, Slc17a8, Scyl2, Actr6
Downstream geneE530015N03Rik, Anks1b, LOC100043039, LOC544719
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-133G13.bB6Ng01-133G13.g
ACCDH933963DH933964
length1,2171,065
definitionDH933963|Mus musculus domesticus DNA, BAC clone: B6Ng01-133G13, 5' end.DH933964|Mus musculus domesticus DNA, BAC clone: B6Ng01-133G13, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctctacttccagccaatgatgtcagttctgatctaatctttgcct
ctgacctcccagagggttggaagctgttgcagtgtatagccttggtagtg
ccatcagagaaatagctcattttgaacccagtcttgtgagtttcttcctg
tctgtggctgaacatgatattgctgccattcctggtagctgagtcatgct
ctgggtacctgaaaggatgatgaccaacagtcctatccaccttgttctca
gcacacagcagtggtcagacagtgacttttcacattcttgttgcatctta
tattcttgcttatgcatgctctgcagtagactaagacttcttcataacat
ggtttgaagagataaaagctgaagattgattgtacacaagtttgggttca
gtaactgtgctggctagttatgtcaacttgatacagtctagagtcatctg
agagaaggaaaccccaactgagaaaaagccaccatgagattgtgcaatag
gtaagcctgtggagcatttcctagctaatgattaattttcttagttattg
ttttagttttattgctgtgaagagacaccatgagtacagcaacttctata
atggaaaaggtttaattgggcctagattacaatttcagaggtttggtcca
ttatcgtcatagcagaaagcatggcattgtacaggtagacatggtcctga
agaaggagcagagagttctacatcttgatccacaggcaataggaggaagg
ctgtagcttgggcatagatctcaaagcctgccctcacagagacactcttt
ctcctacagagccacacctactccaacaaggccacacctcctaatcatgc
tagtccctatgggccaagcattcaaacacaagagtctatggggggccatt
cacattgaagcaaccacagtgattaatgtggggagggcccagcccactgt
gggtagggtcatccatgggggaggtggtcctggactctaaaagaatcagg
ctggagcaagccagggagcaagctggtagtagactccttcatggctctgc
atcaggcttctgcctcaacttcttaccctgcatggagtcctgtcctcatg
ctttgaagatgaactgataatacggaacttgagttgaataaacccttccc
ttccaaacctgtttgatatgatgctcactaccagaattatttacctttga
cggtagttaacacaggc
gaattcagtgttatatcaacttgttttaactttaaaaataccaattaaat
gtctgaagcaacatgttgaaaagcagagatgaaatttaaagtgagaatag
gaaaggtcttccacaaatatcccctaagagaggcttcattacacaaactg
gattgcaagccatgggaacaaatcagacaggtggtaggcaagcttgacct
ctgagctgtgctgtgtcctgtccttaatacttccaaaccttaggaaaaat
gctttttagaaaaagagatcatagtcttcattagagttcagcgtttattc
tgtcatgatttcttgcactttcagtaagtacttttagttttctgacttcc
tgtaggtaaacttgtaggaggaacaagtggtgcttctagagttaagtcag
agttttaaaaagttacccagagaatatcaaaatcaacttctaaatgggat
tgtgtaatttccttcctcagaaaagttaaaaacactatacgtcagaattt
atttctgaagtgttttgggttggtttctaaggctgggagtagcaggtgat
cctcagaggagtggtatgacctctgacccttgttctttgcgtggtgactg
acatctgtgccatgtgagctgctgttagagggtcctctcaatttccctac
ctttgtgtgcttggttaatagcatagcattgtctcttctctctgataggg
tctacagtgaacaaaatgtggtagggactgggcttgcattgtgcctggaa
agcagtggtggatacacagttttcatccatttgagggagtcaggaccaga
cttcagctgtttacaggaatgatgtacacatcggggcccccaaactgtag
actcactattagagagttgtggcctggagagcagagaacagcagtgacag
acactggacatgggttaaaataactcatctctgtggtggagtttagtctt
gctgatgtgtttctagactctgtatttgctaggttgtctttagggtgcat
tagctgaaactaaagtatgtaagtgtggtctctttcagattcacttaaaa
cttatctctgacaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_89234292_89235359
seq2: B6Ng01-133G13.g_67_1131

seq1  GAATTCAGTGTTATATCAACTTGTTTTAACTTTAAAAATACCAATTAAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTGTTATATCAACTTGTTTTAACTTTAAAAATACCAATTAAAT  50

seq1  GTCTGAAGCAACATGTTGAAAAGCAGAGATGAAATTTAAAGTGAGAATAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGAAGCAACATGTTGAAAAGCAGAGATGAAATTTAAAGTGAGAATAG  100

seq1  GAAAGGTCTTCCACAAATATCCCCTAAGAGAGGCTTCATTACACAAACTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGGTCTTCCACAAATATCCCCTAAGAGAGGCTTCATTACACAAACTG  150

seq1  GATTGCAAGCCATGGGAACAAATCAGACAGGTGGTAGGCAAGCTTGACCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGCAAGCCATGGGAACAAATCAGACAGGTGGTAGGCAAGCTTGACCT  200

seq1  CTGAGCTGTGCTGTGTCCTGTCCTTAATACTTCCAAACCTTAGGAAAAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGCTGTGCTGTGTCCTGTCCTTAATACTTCCAAACCTTAGGAAAAAT  250

seq1  GCTTTTTAGAAAAAGAGATCATAGTCTTCATTAGAGTTCAGCGTTTATTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTTTAGAAAAAGAGATCATAGTCTTCATTAGAGTTCAGCGTTTATTC  300

seq1  TGTCATGATTTCTTGCACTTTCAGTAAGTACTTTTAGTTTTCTGACTTCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCATGATTTCTTGCACTTTCAGTAAGTACTTTTAGTTTTCTGACTTCC  350

seq1  TGTAGGTAAACTTGTAGGAGGAACAAGTGGTGCTTCTAGAGTTAAGTCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGGTAAACTTGTAGGAGGAACAAGTGGTGCTTCTAGAGTTAAGTCAG  400

seq1  AGTTTTAAAAAGTTACCCAGAGAATATCAAAATCAACTTCTAAATGGGAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTTAAAAAGTTACCCAGAGAATATCAAAATCAACTTCTAAATGGGAT  450

seq1  TGTGTAATTTCCTTCCTCAGAAAAGTTAAAAACACTATACGTCAGAATTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTAATTTCCTTCCTCAGAAAAGTTAAAAACACTATACGTCAGAATTT  500

seq1  ATTTCTGAAGTGTTTTGGGTTGGTTTCTAAGGCTGGGAGTAGCAGGTGAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTGAAGTGTTTTGGGTTGGTTTCTAAGGCTGGGAGTAGCAGGTGAT  550

seq1  CCTCAGAGGAGTGGTATGACCTCTGACCCTTGTTCTTTGCGTGGTGACTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAGAGGAGTGGTATGACCTCTGACCCTTGTTCTTTGCGTGGTGACTG  600

seq1  ACATCTGTGCCATGTGAGCTGCTGTTAGAGGGTCCTCTCAATTTCCCTAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCTGTGCCATGTGAGCTGCTGTTAGAGGGTCCTCTCAATTTCCCTAC  650

seq1  CTTTGTGTGCTTGGTTAATAGCATAGCATTGTCTCTTCTCTCTGATAGGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGTGTGCTTGGTTAATAGCATAGCATTGTCTCTTCTCTCTGATAGGG  700

seq1  TCTACAGTGAACAAAATGTGGTAGGGACTGGGCTTGCATTGTGCCTGGAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACAGTGAACAAAATGTGGTAGGGACTGGGCTTGCATTGTGCCTGGAA  750

seq1  AGCAGTGGTGGATACACAGTTTTCATCCATTTGAGGGAGTCAGGACCAGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGTGGTGGATACACAGTTTTCATCCATTTGAGGGAGTCAGGACCAGA  800

seq1  CTTCAGCTGTTTACAGGAATGATGTACACATCGGGGCCCCCAAACTGTAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAGCTGTTTACAGGAATGATGTACACATCGGGGCCCCCAAACTGTAG  850

seq1  ACTCACTATTAGAGAGTTGTGGCCTGGAGAGCAGAGAACAGCAGTGACAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCACTATTAGAGAGTTGTGGCCTGGAGAGCAGAGAACAGCAGTGACAG  900

seq1  ACACTGGACATGGGTTAAAATAAACTCATCTCTGTGGTGGAGTTTAGTC-  949
      ||||||||||||||||||||| ||||||||||||||||||||||||||| 
seq2  ACACTGGACATGGGTTAAAAT-AACTCATCTCTGTGGTGGAGTTTAGTCT  949

seq1  TGCTGATGTGTTTCTAGAACTCTGTATTTGCTAGGTTGTCTGTAGGGTGC  999
      ||||||||||||||||| ||||||||||||||||||||||| ||||||||
seq2  TGCTGATGTGTTTCTAG-ACTCTGTATTTGCTAGGTTGTCTTTAGGGTGC  998

seq1  ATTAGCTGACACTAAAGTAATGTAAGTGTGGTCTCTTTCAGATTCACTAA  1049
      ||||||||| |||||||| ||||||||||||||||||||||||||||| |
seq2  ATTAGCTGAAACTAAAGT-ATGTAAGTGTGGTCTCTTTCAGATTCACTTA  1047

seq1  AAACTTATCTCCTGACAAA  1068
      |||||||||| ||||||||
seq2  AAACTTATCT-CTGACAAA  1065