BAC Information

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BAC

Clone NameB6Ng01-134D06
Chromosome10 (Build37)
Map Location 30,510,941 - 30,629,669
singlet/doubletdoublet
Overlap geneNcoa7, LOC382354, Hey2
Upstream geneLOC674389, Gm232, LOC667696, LOC100040542, 2610036L11Rik, LOC212815, Trmt11, Hint3
Downstream geneLOC654431, EG432448, Hddc2, Tpd52l1, LOC100041294, Ibrdc1, LOC666055, LOC667752, LOC100040638, Tcba1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-134D06.bB6Ng01-134D06.g
ACCDH934560DH934561
length884995
definitionDH934560|Mus musculus domesticus DNA, BAC clone: B6Ng01-134D06, 5' end.DH934561|Mus musculus domesticus DNA, BAC clone: B6Ng01-134D06, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(30,628,790 - 30,629,669)(30,510,941 - 30,511,821)
sequence
gaattcctaggaaaggaagaataaaggaataaagtttataaatagtctcg
tactaaagatttttccaatggaaagtgaagctgtctggtcttcatttttt
ttttcagaaccattttttcccctaacatctcttggttgtcagggatacaa
taaggccattaagaccataattatcctcctttccatgctgaactccctaa
tgacgctgggagctagtgtctccttctaggaggtgatggggaaaggtgga
taacagcagatccgctcgtgcttgcagatatactaggatatcctgggaac
tgttcatacactgaaaattacgaggagtctttttttttttaaacttcaaa
gatttaaaaggggatggatattctttagaatctaagcccaagctaagatt
tatcccccaggactttcctgttactttcagctgatgttgaccacattctt
tctatgctcctgtcttcaaccctaagtggggaaactgatcaaacgcattc
tgcacattccaccaagcccacagagtcagccttccatttgcaggactaac
ctcacaaatgcacagactgtcttcagctcccccaaaacaaagcagtttct
ggatgccctttccttcagtttctgctccacactttgtatctgtaactcct
ctcatgggtgttttgtccccctgctgagaaggaccaaagaatccacactt
tgctcttccatattttgagcttcatagggtctgtgagttgtatctttggt
attccgagcttctgggctaatatccactttcttttgtgattgggttaacc
tcactcaggatgatattctccagatccatcccgtttgcctaagaatttca
taaattcattggttttaatcgctgagtaagtact
gaattctcctgcattcttcctgggccacccgacacaagaatttgcttgtg
ataataatttaccagccagaaatttcacacaaacagggctaaacactgtc
aaagactgttaataagtcatgaaagccatcaccccattcagggcattttg
taataaactgagcgcctgacatgccctctaggttagaatttaaaatgtct
cactaacaagttattttttatgatgggcttttttcttgatagttcatgtc
atctatggagggcaaggttgaacaagttcgacttccaaaatttccctttc
ttctttttagagccctaaatatcatggcactctctttggaactttagctc
cttttattttttactttttattttttctgtttttcagtttttaaaatcta
tttgaaacattaaacttgatagaagtagaaaaaaatctcttgtgaagtct
tctatgaaaggaaattgtgacaggaccctgattatacagaaactgttaca
tctacaagggagaatactcagtgtaactgtggcttcatagagtgaactgg
gtagtgttctttctgtttctactttgtagaatagtttgaagagtattggt
attaggtcttctttaaaggtctgatagaattctgcactaaaatcatcagg
tcctgggcttgctttggttgggagactattaatgacttcttctattaatg
acttcttcgatttctttaggggttgtgggactgtttagatggtttccctg
accctgtttaactttggtatttggtatctatctagaaaattgtccatttc
atccaggttttccagttttgttgagtatagccctttgtagtaggatccga
tgatgctttggatttcttcgtgttctgttgttatttctcccttttcattt
ctcattttgttaattaggacactgtctctgtgtgctctggttagcctggc
taaggtttatctatctgttgattttctcaaagaaccagctctgtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_30628790_30629669
seq2: B6Ng01-134D06.b_47_930 (reverse)

seq1  AGTAC-TACTCAGCGATTAAAACCAATGAATTTATGAAATTCTTAGGCAA  49
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACTTACTCAGCGATTAAAACCAATGAATTTATGAAATTCTTAGGCAA  50

seq1  AC-GGATGGATCTGGAGAATATCATCCTGAGTGA-GTTAACCCAATCACA  97
      || ||||||||||||||||||||||||||||||| |||||||||||||||
seq2  ACGGGATGGATCTGGAGAATATCATCCTGAGTGAGGTTAACCCAATCACA  100

seq1  AAAG-AAGTGGATATTAGCCCAGAAGCTCGGAATACC-AAGATACAACTC  145
      |||| |||||||||||||||||||||||||||||||| ||||||||||||
seq2  AAAGAAAGTGGATATTAGCCCAGAAGCTCGGAATACCAAAGATACAACTC  150

seq1  ACAGACCCTATGAAGCTCAAAATATGGAAGAGCAAAGTGTGGATTCTTTG  195
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGACCCTATGAAGCTCAAAATATGGAAGAGCAAAGTGTGGATTCTTTG  200

seq1  GTCCTTCTCAGCAGGGGGACAAAACACCCATGAGAGGAGTTACAGATACA  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTTCTCAGCAGGGGGACAAAACACCCATGAGAGGAGTTACAGATACA  250

seq1  AAGTGTGGAGCAGAAACTGAAGGAAAGGGCATCCAGAAACTGCTTTGTTT  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGTGGAGCAGAAACTGAAGGAAAGGGCATCCAGAAACTGCTTTGTTT  300

seq1  TGGGGGAGCTGAAGACAGTCTGTGCATTTGTGAGGTTAGTCCTGCAAATG  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGGAGCTGAAGACAGTCTGTGCATTTGTGAGGTTAGTCCTGCAAATG  350

seq1  GAAGGCTGACTCTGTGGGCTTGGTGGAATGTGCAGAATGCGTTTGATCAG  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGCTGACTCTGTGGGCTTGGTGGAATGTGCAGAATGCGTTTGATCAG  400

seq1  TTTCCCCACTTAGGGTTGAAGACAGGAGCATAGAAAGAATGTGGTCAACA  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCCCACTTAGGGTTGAAGACAGGAGCATAGAAAGAATGTGGTCAACA  450

seq1  TCAGCTGAAAGTAACAGGAAAGTCCTGGGGGATAAATCTTAGCTTGGGCT  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCTGAAAGTAACAGGAAAGTCCTGGGGGATAAATCTTAGCTTGGGCT  500

seq1  TAGATTCTAAAGAATATCCATCCCCTTTTAAATCTTTGAAGTTTAAAAAA  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATTCTAAAGAATATCCATCCCCTTTTAAATCTTTGAAGTTTAAAAAA  550

seq1  AAAAAGACTCCTCGTAATTTTCAGTGTATGAACAGTTCCCAGGATATCCT  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGACTCCTCGTAATTTTCAGTGTATGAACAGTTCCCAGGATATCCT  600

seq1  AGTATATCTGCAAGCACGAGCGGATCTGCTGTTATCCACCTTTCCCCATC  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATATCTGCAAGCACGAGCGGATCTGCTGTTATCCACCTTTCCCCATC  650

seq1  ACCTCCTAGAAGGAGACACTAGCTCCCAGCGTCATTAGGGAGTTCAGCAT  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCCTAGAAGGAGACACTAGCTCCCAGCGTCATTAGGGAGTTCAGCAT  700

seq1  GGAAAGGAGGATAATTATGGTCTTAATGGCCTTATTGTATCCCTGACAAC  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAGGAGGATAATTATGGTCTTAATGGCCTTATTGTATCCCTGACAAC  750

seq1  CAAGAGATGTTAGGGGAAAAAATGGTTCTGAAAAAAAAAATGAAGACCAG  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAGATGTTAGGGGAAAAAATGGTTCTGAAAAAAAAAATGAAGACCAG  800

seq1  ACAGCTTCACTTTCCATTGGAAAAATCTTTAGTACGAGACTATTTATAAA  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCTTCACTTTCCATTGGAAAAATCTTTAGTACGAGACTATTTATAAA  850

seq1  CTTTATTGCCTTTATTCTTCCTTTCCTAGGAATTC  880
      ||||||| |||||||||||||||||||||||||||
seq2  CTTTATT-CCTTTATTCTTCCTTTCCTAGGAATTC  884

seq1: chr10_30510941_30511821
seq2: B6Ng01-134D06.g_68_948

seq1  GAATTCTCCTGCATTCTTCCTGGGCCACCCGACACAAGAATTTGCTTGTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCTGCATTCTTCCTGGGCCACCCGACACAAGAATTTGCTTGTG  50

seq1  ATAATAATTTACCAGCCAGAAATTTCACACAAACAGGGCTAAACACTGTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATAATTTACCAGCCAGAAATTTCACACAAACAGGGCTAAACACTGTC  100

seq1  AAAGACTGTTAATAAGTCATGAAAGCCATCACCCCATTCAGGGCATTTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGACTGTTAATAAGTCATGAAAGCCATCACCCCATTCAGGGCATTTTG  150

seq1  TAATAAACTGAGCGCCTGACATGCCCTCTAGGTTAGAATTTAAAATGTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAAACTGAGCGCCTGACATGCCCTCTAGGTTAGAATTTAAAATGTCT  200

seq1  CACTAACAAGTTATTTTTTATGATGGGCTTTTTTCTTGATAGTTCATGTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTAACAAGTTATTTTTTATGATGGGCTTTTTTCTTGATAGTTCATGTC  250

seq1  ATCTATGGAGGGCAAGGTTGAACAAGTTCGACTTCCAAAATTTCCCTTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTATGGAGGGCAAGGTTGAACAAGTTCGACTTCCAAAATTTCCCTTTC  300

seq1  TTCTTTTTAGAGCCCTAAATATCATGGCACTCTCTTTGGAACTTTAGCTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTTTAGAGCCCTAAATATCATGGCACTCTCTTTGGAACTTTAGCTC  350

seq1  CTTTTATTTTTTACTTTTTATTTTTTCTGTTTTTCAGTTTTTAAAATCTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTATTTTTTACTTTTTATTTTTTCTGTTTTTCAGTTTTTAAAATCTA  400

seq1  TTTGAAACATTAAACTTGATAGAAGTAGAAAAAAATCTCTTGTGAAGTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAAACATTAAACTTGATAGAAGTAGAAAAAAATCTCTTGTGAAGTCT  450

seq1  TCTATGAAAGGAAATTGTGACAGGACCCTGATTATACAGAAACTGTTACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATGAAAGGAAATTGTGACAGGACCCTGATTATACAGAAACTGTTACA  500

seq1  TCTACAAGGGAGAATACTCAGTGTAACTGTGGCTTCATAGAGTGAACTGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACAAGGGAGAATACTCAGTGTAACTGTGGCTTCATAGAGTGAACTGG  550

seq1  GTAGTGTTCTTTCTGTTTCTACTTTGTAGAATAGTTTGAAGAGTATTGGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTGTTCTTTCTGTTTCTACTTTGTAGAATAGTTTGAAGAGTATTGGT  600

seq1  ATTAGGTCTTCTTTAAAGGTCTGATAGAATTCTGCACTAAAATCATCAGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGGTCTTCTTTAAAGGTCTGATAGAATTCTGCACTAAAATCATCAGG  650

seq1  TCCTGGGCTTGCTTTGGTTGGGAGACTATTAATGACTTCTTCTATTAATG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGGGCTTGCTTTGGTTGGGAGACTATTAATGACTTCTTCTATTAATG  700

seq1  ACTTCTTCGATTTCTTTAGGGGTTGTGGGACTGTTTAGATGGTTTCCCTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCTTCGATTTCTTTAGGGGTTGTGGGACTGTTTAGATGGTTTCCCTG  750

seq1  ACCCTGTTTAACTTTGGTATTTGGTATCTATCTAGAAAATTGTCCATTTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTGTTTAACTTTGGTATTTGGTATCTATCTAGAAAATTGTCCATTTC  800

seq1  ATCCAGGTTTTCCAGTTTTGTTGAGTATAGCCCTTTGTAGTAGGATCCGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCAGGTTTTCCAGTTTTGTTGAGTATAGCCCTTTGTAGTAGGATCCGA  850

seq1  TGATGCTTTGGATTTCTTCGTGTTCTGTTGT  881
      |||||||||||||||||||||||||||||||
seq2  TGATGCTTTGGATTTCTTCGTGTTCTGTTGT  881