BAC Information

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BAC

Clone NameB6Ng01-134I04
Chromosome10 (Build37)
Map Location 75,777,208 - 75,929,666
singlet/doubletdoublet
Overlap geneDip2a, Pcnt, 2610028H24Rik, A130042E20Rik
Upstream geneAdora2a, EG544707, Upb1, 1110038D17Rik, Snrpd3, AI646023, Ggt1, Ggtla1, Susd2, Cabin1, Ddt, Gstt3, Gstt1, Gstt4, Gstt2, Mif, Derl3, Smarcb1, Mmp11, Ndg2, Gm867, Vpreb3, EG333669, Suhw2, Slc5a4b, Slc5a4a, LOC100040150, Prmt2, S100b
Downstream geneMcm3ap, Lss, 1700027D21Rik, Ftcd, Col6a2, Col6a1, Pcbp3, LOC100041099, Slc19a1, Col18a1, LOC665762, Pofut2, Adarb1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-134I04.bB6Ng01-134I04.g
ACCDH934788DH934789
length1,081373
definitionDH934788|Mus musculus domesticus DNA, BAC clone: B6Ng01-134I04, 5' end.DH934789|Mus musculus domesticus DNA, BAC clone: B6Ng01-134I04, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(75,777,208 - 75,778,289)(75,929,288 - 75,929,666)
sequence
gaattcagagaataactgtagaatgacgaagggagtgaggcgttgtggct
cacactgcacgcacactcggtacagcaagcccacgtgataaaggctggtg
atctgcggattttacgtaagtgtgcttcatattcccttaaacctctgctg
atctaaggactctgatgcttcaattctgaccatctatcacgtcattaact
tgaatcaaattcaaagaaagatctgaatatataggaagaaagaaaataca
cgggaaaaaaaacacacacacttgctatttatagaacagaatacacattt
ttgaaaaaaaaatctaaaacttgagtggcggttttcacagcccatgaaaa
ggcctggtgatgagcaagcttttaagtatgactctcgggaagagcttcca
gtttataaagaaacatccctgtgcttccaaaccgagcaaaaagaacaatg
agtgtaaaagaatttatgaaacttaggataataacttataatgatgataa
catatactacaaagtatattatcagctacataaaactaaactttgcttta
tgaaactatcactataaatactgtttttgaaggtagatgttttatctttg
tcaaaatgtttaatgtattctatttcttcaatccaaaacctgaaactaat
acaaaaacatacctttatctaaaaagctatacttcaaaatttttacttac
tatactgttcttcctatatctttccttcattcagctgcagagctatgtta
gagctttgtgatgaggacgggaagctgggtacacactgagcagcccctag
gccaatggctgggagcttcatagtttcagaaatcagaggagtatagatct
gggacagtcacatacctcattagttaagcactcctaacagaaactctaaa
atgttctaatgtgctgctctaaattgcagacttgagattaaaggaagcta
aatctgattcagaaatcaagttaagagccaatgagaaggctcagcagata
accacttgccgtgaactctgacctcagttcattcctgggaaggagaggac
tgactgccacgtgcacactggtggcacattc
actttgtagaccaggctggcctcgaactcagaaatccacctgcctctgcc
tcccaagtgctgggattaaaggcgtgcgccaccacgcccggcttatatgt
aagtacactgtagctgtcttcagacactccagaagagggagtcagatctc
gttaccgatggttgtgagccaccatgtggttgctgggatttgaactccgg
accttcagaagagcagtcagtgttcttacccactgagccactctccagcc
tgtttcccttaacaggaaaaaatggcaggcacacaagtggggaaagagtg
tgattgtgtccatatgccaattcaatgatattgaatgtgactttgagagg
ggttgggggggtgagtagataat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_75777208_75778289
seq2: B6Ng01-134I04.b_48_1128

seq1  GAATTCAGAGAATAACTGTAGAATGACGAAGGGAGTGAGGCGTTGTGGCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGAGAATAACTGTAGAATGACGAAGGGAGTGAGGCGTTGTGGCT  50

seq1  CACACTGCACGCACACTCGGTACAGCAAGCCCACGTGATAAAGGCTGGTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACTGCACGCACACTCGGTACAGCAAGCCCACGTGATAAAGGCTGGTG  100

seq1  ATCTGCGGATTTTACGTAAGTGTGCTTCATATTCCCTTAAACCTCTGCTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGCGGATTTTACGTAAGTGTGCTTCATATTCCCTTAAACCTCTGCTG  150

seq1  ATCTAAGGACTCTGATGCTTCAATTCTGACCATCTATCACGTCATTAACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTAAGGACTCTGATGCTTCAATTCTGACCATCTATCACGTCATTAACT  200

seq1  TGAATCAAATTCAAAGAAAGATCTGAATATATAGGAAGAAAGAAAATACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATCAAATTCAAAGAAAGATCTGAATATATAGGAAGAAAGAAAATACA  250

seq1  CGGGAAAAAAAACACACACACTTGCTATTTATAGAACAGAATACACATTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGGAAAAAAAACACACACACTTGCTATTTATAGAACAGAATACACATTT  300

seq1  TTGAAAAAAAAATCTAAAACTTGAGTGGCGGTTTTCACAGCCCATGAAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAAAAAAAATCTAAAACTTGAGTGGCGGTTTTCACAGCCCATGAAAA  350

seq1  GGCCTGGTGATGAGCAAGCTTTTAAGTATGACTCTCGGGAAGAGCTTCCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTGGTGATGAGCAAGCTTTTAAGTATGACTCTCGGGAAGAGCTTCCA  400

seq1  GTTTATAAAGAAACATCCCTGTGCTTCCAAACCGAGCAAAAAGAACAATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTATAAAGAAACATCCCTGTGCTTCCAAACCGAGCAAAAAGAACAATG  450

seq1  AGTGTAAAAGAATTTATGAAACTTAGGATAATAACTTATAATGATGATAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTAAAAGAATTTATGAAACTTAGGATAATAACTTATAATGATGATAA  500

seq1  CATATACTACAAAGTATATTATCAGCTACATAAAACTAAACTTTGCTTTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATACTACAAAGTATATTATCAGCTACATAAAACTAAACTTTGCTTTA  550

seq1  TGAAACTATCACTATAAATACTGTTTTTGAAGGTAGATGTTTTATCTTTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAACTATCACTATAAATACTGTTTTTGAAGGTAGATGTTTTATCTTTG  600

seq1  TCAAAATGTTTAATGTATTCTATTTCTTCAATCCAAAACCTGAAACTAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAATGTTTAATGTATTCTATTTCTTCAATCCAAAACCTGAAACTAAT  650

seq1  ACAAAAACATACCTTTATCTAAAAAGCTATACTTCAAAATTTTTACTTAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAAACATACCTTTATCTAAAAAGCTATACTTCAAAATTTTTACTTAC  700

seq1  TATACTGTTCTTCCTATATCTTTCCTTCATTCAGCTGCAGAGCTATGTTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACTGTTCTTCCTATATCTTTCCTTCATTCAGCTGCAGAGCTATGTTA  750

seq1  GAGCTTTGTGATGAGGACGGGAAGCTGGGTACACACTGAGCAGCCCCTAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTTTGTGATGAGGACGGGAAGCTGGGTACACACTGAGCAGCCCCTAG  800

seq1  GCCAATGGCTGGGAGCTTCATAG-TTCAGAAATCAGAGGAGTATAGATCT  849
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  GCCAATGGCTGGGAGCTTCATAGTTTCAGAAATCAGAGGAGTATAGATCT  850

seq1  GGGACAGTCACATACCTCATTAGTTAAGCACTCCTAACAGAAACTCTAAA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGACAGTCACATACCTCATTAGTTAAGCACTCCTAACAGAAACTCTAAA  900

seq1  ATGTTCTAATGTGCTGCTCTAAATTGCAGACTTGAGATT-AAGGAAGCTA  948
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  ATGTTCTAATGTGCTGCTCTAAATTGCAGACTTGAGATTAAAGGAAGCTA  950

seq1  AATCTGAATTCAGAAATCAAGTTAAGAGCCAATGAGAAGGCTCAGCAGAT  998
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTG-ATTCAGAAATCAAGTTAAGAGCCAATGAGAAGGCTCAGCAGAT  999

seq1  AAAACCACTTGCCGTGAACTCTGACCTCAGTTCATTCCCTGGGAAGGAGA  1048
        |||||||||||||||||||||||||||||||||| |||||||||||||
seq2  --AACCACTTGCCGTGAACTCTGACCTCAGTTCATT-CCTGGGAAGGAGA  1046

seq1  GGACTGACTGCCACGTGCACACT-GTGGCACATTC  1082
      ||||||||||||||||||||||| |||||||||||
seq2  GGACTGACTGCCACGTGCACACTGGTGGCACATTC  1081

seq1: chr10_75929288_75929666
seq2: B6Ng01-134I04.g_68_446 (reverse)

seq1  ATTATCTACTCACCCCCCCAACCCCTCTCAAAGTCACATTCAATATCATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATCTACTCACCCCCCCAACCCCTCTCAAAGTCACATTCAATATCATT  50

seq1  GAATTGGCATATGGACACAATCACACTCTTTCCCCACTTGTGTGCCTGCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTGGCATATGGACACAATCACACTCTTTCCCCACTTGTGTGCCTGCC  100

seq1  ATTTTTTCCTGTTAAGGGAAACAGGCTGGAGAGTGGCTCAGTGGGTAAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTTCCTGTTAAGGGAAACAGGCTGGAGAGTGGCTCAGTGGGTAAGA  150

seq1  ACACTGACTGCTCTTCTGAAGGTCCGGAGTTCAAATCCCAGCAACCACAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTGACTGCTCTTCTGAAGGTCCGGAGTTCAAATCCCAGCAACCACAT  200

seq1  GGTGGCTCACAACCATCGGTAACGAGATCTGACTCCCTCTTCTGGAGTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGCTCACAACCATCGGTAACGAGATCTGACTCCCTCTTCTGGAGTGT  250

seq1  CTGAAGACAGCTACAGTGTACTTACATATAAGCCGGGCGTGGTGGCGCAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAGACAGCTACAGTGTACTTACATATAAGCCGGGCGTGGTGGCGCAC  300

seq1  GCCTTTAATCCCAGCACTTGGGAGGCAGAGGCAGGTGGATTTCTGAGTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTTAATCCCAGCACTTGGGAGGCAGAGGCAGGTGGATTTCTGAGTTC  350

seq1  GAGGCCAGCCTGGTCTACAAAGTGAATTC  379
      |||||||||||||||||||||||||||||
seq2  GAGGCCAGCCTGGTCTACAAAGTGAATTC  379