BAC Information

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BAC

Clone NameB6Ng01-134P09
Chromosome10 (Build37)
Map Location 126,481,978 - 126,642,349
singlet/doubletdoublet
Overlap geneMettl1, Cyp27b1, March9, Cdk4, Tspan31, Centg1, Os9, LOC100043028, B4galnt1, LOC100043035, C78409, D10Ertd610e, Dtx3, Pip5k2c
Upstream geneLOC100043547, LOC668336, Xrcc6bp1, LOC622567, Ctdsp2, Avil, Tsfm
Downstream geneKif5a, Dctn2, Mbd6, LOC100043045, Ddit3, Mars, LOC622075, Arhgap9, Gli1, Inhbe, Inhbc, R3hdm2, Stac3, Ndufa4l2, Shmt2, Nxph4, Lrp1, LOC100043054, Stat6, Nab2, BC030440, Myo1a, Tac2, Zbtb39, Admr, Rdh1, Rdh9, Rdh16, AY053573, Rdhs, BC089597, Rdh7, Sdro, LOC382468, Hsd17b6, LOC100043618, Prim1, LOC100043077, Naca, Ptges3, Atp5b, Baz2a, LOC100043085, Rbms2, LOC100043624, Gls2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-134P09.bB6Ng01-134P09.g
ACCDH935129DH935130
length1,1381,138
definitionDH935129|Mus musculus domesticus DNA, BAC clone: B6Ng01-134P09, 5' end.DH935130|Mus musculus domesticus DNA, BAC clone: B6Ng01-134P09, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(126,641,206 - 126,642,349)(126,481,978 - 126,483,123)
sequence
gaattcattttatttaaaacctttttattttatgtttatgggtgttttgt
ctgcatgcgtgtcggtacaccatgtgtgtgcctggtgccctcaggcctga
agaggcattggatcccctggaactgtagttacggacagttgtgagctgct
gtatacgtactgggaatgaacccttgactctgcaagagcagcgggtgttc
ttaactgctgagccatggctttagtccctaatattttttaattaaaattt
ttatttttaagctgggtgtggtggtacacacctttaatcccagtactgtg
gaggcagaggcagaggcagacagatctacagagggagtttgagggcagcc
aggactacacaaagaaaccctgtcttgataaacagatataaaatttgttt
gtttatgagcgcatatgccgctgcctgctgatggcagttggatagctcca
gggactgattttatcctttcatcatctggccccagcggctgagcagactt
caggcttagagacaagcacttgtaccaaccccagaagtggattttgagtg
gttagaagtagaggttaatcattggacacggtggacaagggaaatggtct
ttgttaaagcacagtaccatgcaggtgtttgatattacgaaattgcaaaa
atcctaatgtagctagcatgtgtggtattaggaaaattaagctagaatca
gatagtgaaagggcctataagtccgttgaatagaaatttgggtcttatcc
tgaagatggttttcggggaactgaaaatactattcagctggccgggcgtg
gtggcgcacgccttttaatcccagcacttgggaggcagaggcaggtggat
ttcttagtttaaggccagcctggtctacagagtgagttcttaggatagcc
aaggctacacagagaaccctgtctcgaaaaaacaccaccaccaaaaaaaa
aaaaaatgcagataatgagggttggacatagaactcatacttagcatgta
cgaggcctgagtctgtggctcactgtctataaccagaagacaagaatcga
gaaagcaagcaggcaagaactcaccttggggggttggagaagggccggta
caaggctctctgcggtgccggtatatgtaccatctagg
gaattcagcctgggggaggcacagctaagcagtagcacgatcagcgtcat
cacctcgttgctcggctgcatgcagccctgtctccaacactgtcgctcat
ccagggcctggtgtacaccgtcaccgacgtgccggagctgcatgagtgga
tgtgcacccactttgaagaacacccactgtttgagcgtgtgcctcttgaa
gagctagtaagtcagacatccgagggaaatggcaggccattcagagtggc
cccatagctggtccttgaacttagctcagggctgggaggacgggagtctc
caggccctaaggcagtttaaaagatgggcagggacattctggaccctctt
tctgcagagtgaagaccccattgtggaacatctaggcagttcaactgagg
aaggaaagaaagttctacgcaatgggggaaagaatttcccagccgtcttc
cgaagaatacaggatcccctcctccaggcagtgacccccaaccccaccct
gccttagccagaccccctagaaggtgactggaaaaaagataaaaaaaaag
aaagaaagaaagaaagaaagccaggcgtggtggcgcacgcctttaatccc
agcactcgggaggcagaggcagaggcagaggcagtcggatttctgagttt
gaggccagccagggctacacagagaaaccctgtctcgaaaaaccaaaaaa
aaaaaaaaaaaaaggtcagctccccaggccttcccagactggtgggactg
tggggccgtgacctctccaagaagttggttggggagcagtctgtggtgtt
ctttacccatcgctcttactgcctttttgttcctccactgtctgaagaaa
tcagatgaagctggctgagaaggtcaaaggactgtgggccagagggatat
ttggagggctgtggatattctgttctcattgagcaccccccccccccccc
ggagcttctctagctcgggtgagcatgtgatgcccactgtttagttgtgt
gtgtggagaaacatgtgaatgtaacactgtttagctgtgtgtggctcagt
gctcacttggtttactttgcagtcctggggatgatcaggggttgtgccca
cgtacccattgtggtgtgtgccacgcatcatgtgatac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_126641206_126642349
seq2: B6Ng01-134P09.b_44_1181 (reverse)

seq1  CCTAGATGGTTACAATTAACCGGCACCGCAGGCAGCTCTGTACGCGCCC-  49
      ||||||||| ||| ||  |||||||||||||  |||  |||||  |||| 
seq2  CCTAGATGG-TAC-ATATACCGGCACCGCAGAGAGCCTTGTACCGGCCCT  48

seq1  TCTCCAACCCCCAGGGTTGGGTTCTTGCTTGCTTGCTTTCTCTGTTTCTT  99
      ||||||||||||   | || |||||||| ||||||||||||| | ||| |
seq2  TCTCCAACCCCCCAAGGTGAGTTCTTGCCTGCTTGCTTTCTC-GATTC-T  96

seq1  TGTCTTCTGTTTATAG-CAGTGAG-CACAGAACTCAGGGCCTCGTACATG  147
      ||||||||| |||||| ||||||| ||||| ||||| |||||||||||||
seq2  TGTCTTCTGGTTATAGACAGTGAGCCACAG-ACTCA-GGCCTCGTACATG  144

seq1  CTAAGTATGAGTTCTATGTCCAACCCTTCATTTATCTGCATTTTTTTTTT  197
      |||||||||||||||||||||||||| ||| |||||||||||||||||||
seq2  CTAAGTATGAGTTCTATGTCCAACCC-TCA-TTATCTGCATTTTTTTTTT  192

seq1  TTTTGGTGGTGGTGTTTTTTTCGAGACAGGGTTTCTCTGTGTAGCCTTGG  247
      |||||||||||||| |||||||||||||||| ||||||||||||||||||
seq2  TTTTGGTGGTGGTG-TTTTTTCGAGACAGGG-TTCTCTGTGTAGCCTTGG  240

seq1  CTATCCT-AGAACTCACTCTGTAGACCAGGCTGGCCTTGAACTAAGAAAT  296
      ||||||| |||||||||||||||||||||||||||||| |||||||||||
seq2  CTATCCTAAGAACTCACTCTGTAGACCAGGCTGGCCTTAAACTAAGAAAT  290

seq1  CCACCTGCCTCTGCCTCCCAAGTGCTGGGATT-AAAGGCGTGCGCCACCA  345
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  CCACCTGCCTCTGCCTCCCAAGTGCTGGGATTAAAAGGCGTGCGCCACCA  340

seq1  CGCCCGGCCAGCCTGAATAGCATTTTCAGTTCCCCGAAAACCATCTTCAG  395
      ||||||||||| |||||||| |||||||||||||||||||||||||||||
seq2  CGCCCGGCCAG-CTGAATAGTATTTTCAGTTCCCCGAAAACCATCTTCAG  389

seq1  GATAAGACCCAAATTTCTATTCAACGGACTTATAGGCCCTTTCACTATCT  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAAGACCCAAATTTCTATTCAACGGACTTATAGGCCCTTTCACTATCT  439

seq1  GATTCTAGCTTAATTTTCCTAATACCACACATGCTAGCTACATTAGGATT  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCTAGCTTAATTTTCCTAATACCACACATGCTAGCTACATTAGGATT  489

seq1  TTTGCAATTTCGTAATATCAAACACCTGCATGGTACTGTGCTTTAACAAA  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCAATTTCGTAATATCAAACACCTGCATGGTACTGTGCTTTAACAAA  539

seq1  GACCATTTCCCTTGTCCACCGTGTCCAATGATTAACCTCTACTTCTAACC  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCATTTCCCTTGTCCACCGTGTCCAATGATTAACCTCTACTTCTAACC  589

seq1  ACTCAAAATCCACTTCTGGGGTTGGTACAAGTGCTTGTCTCTAAGCCTGA  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAAAATCCACTTCTGGGGTTGGTACAAGTGCTTGTCTCTAAGCCTGA  639

seq1  AGTCTGCTCAGCCGCTGGGGCCAGATGATGAAAGGATAAAATCAGTCCCT  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTGCTCAGCCGCTGGGGCCAGATGATGAAAGGATAAAATCAGTCCCT  689

seq1  GGAGCTATCCAACTGCCATCAGCAGGCAGCGGCATATGCGCTCATAAACA  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCTATCCAACTGCCATCAGCAGGCAGCGGCATATGCGCTCATAAACA  739

seq1  AACAAATTTTATATCTGTTTATCAAGACAGGGTTTCTTTGTGTAGTCCTG  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAATTTTATATCTGTTTATCAAGACAGGGTTTCTTTGTGTAGTCCTG  789

seq1  GCTGCCCTCAAACTCCCTCTGTAGATCTGTCTGCCTCTGCCTCTGCCTCC  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCCCTCAAACTCCCTCTGTAGATCTGTCTGCCTCTGCCTCTGCCTCC  839

seq1  ACAGTACTGGGATTAAAGGTGTGTACCACCACACCCAGCTTAAAAATAAA  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTACTGGGATTAAAGGTGTGTACCACCACACCCAGCTTAAAAATAAA  889

seq1  AATTTTAATTAAAAAATATTAGGGACTAAAGCCATGGCTCAGCAGTTAAG  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTAATTAAAAAATATTAGGGACTAAAGCCATGGCTCAGCAGTTAAG  939

seq1  AACACCCGCTGCTCTTGCAGAGTCAAGGGTTCATTCCCAGTACGTATACA  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACCCGCTGCTCTTGCAGAGTCAAGGGTTCATTCCCAGTACGTATACA  989

seq1  GCAGCTCACAACTGTCCGTAACTACAGTTCCAGGGGATCCAATGCCTCTT  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCTCACAACTGTCCGTAACTACAGTTCCAGGGGATCCAATGCCTCTT  1039

seq1  CAGGCCTGAGGGCACCAGGCACACACATGGTGTACCGACACGCATGCAGA  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCCTGAGGGCACCAGGCACACACATGGTGTACCGACACGCATGCAGA  1089

seq1  CAAAACACCCATAAACATAAAATAAAAAGGTTTTAAATAAAATGAATTC  1144
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAACACCCATAAACATAAAATAAAAAGGTTTTAAATAAAATGAATTC  1138

seq1: chr10_126481978_126483123
seq2: B6Ng01-134P09.g_66_1203

seq1  GAATTCAGCCTGGGGGAGGCACAGCTAAGCAGTAGCACGATCAGCGTCAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGCCTGGGGGAGGCACAGCTAAGCAGTAGCACGATCAGCGTCAT  50

seq1  CACCTCGTTGCTCGGCTGCATGCAGCCCTGTCTCCAACACTGTCGCTCAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTCGTTGCTCGGCTGCATGCAGCCCTGTCTCCAACACTGTCGCTCAT  100

seq1  CCAGGGCCTGGTGTACACCGTCACCGACGTGCCGGAGCTGCATGAGTGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGGCCTGGTGTACACCGTCACCGACGTGCCGGAGCTGCATGAGTGGA  150

seq1  TGTGCACCCACTTTGAAGAACACCCACTGTTTGAGCGTGTGCCTCTTGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCACCCACTTTGAAGAACACCCACTGTTTGAGCGTGTGCCTCTTGAA  200

seq1  GAGCTAGTAAGTCAGACATCCGAGGGAAATGGCAGGCCATTCAGAGTGGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTAGTAAGTCAGACATCCGAGGGAAATGGCAGGCCATTCAGAGTGGC  250

seq1  CCCATAGCTGGTCCTTGAACTTAGCTCAGGGCTGGGAGGACGGGAGTCTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATAGCTGGTCCTTGAACTTAGCTCAGGGCTGGGAGGACGGGAGTCTC  300

seq1  CAGGCCCTAAGGCAGTTTAAAAGATGGGCAGGGACATTCTGGACCCTCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCCCTAAGGCAGTTTAAAAGATGGGCAGGGACATTCTGGACCCTCTT  350

seq1  TCTGCAGAGTGAAGACCCCATTGTGGAACATCTAGGCAGTTCAACTGAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCAGAGTGAAGACCCCATTGTGGAACATCTAGGCAGTTCAACTGAGG  400

seq1  AAGGAAAGAAAGTTCTACGCAATGGGGGAAAGAATTTCCCAGCCGTCTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAAAGAAAGTTCTACGCAATGGGGGAAAGAATTTCCCAGCCGTCTTC  450

seq1  CGAAGAATACAGGATCCCCTCCTCCAGGCAGTGACCCCCAACCCCACCCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAAGAATACAGGATCCCCTCCTCCAGGCAGTGACCCCCAACCCCACCCT  500

seq1  GCCTTAGCCAGACCCCCTAGAAGGTGACTGGAAAAAAGATAAAAAAAAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTAGCCAGACCCCCTAGAAGGTGACTGGAAAAAAGATAAAAAAAAAG  550

seq1  AAAGAAAGAAAGAAAGAAAGCCAGGCGTGGTGGCGCACGCCTTTAATCCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAAGAAAGAAAGAAAGCCAGGCGTGGTGGCGCACGCCTTTAATCCC  600

seq1  AGCACTCGGGAGGCAGAGGCAGAGGCAGAGGCAGTCGGATTTCTGAGTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACTCGGGAGGCAGAGGCAGAGGCAGAGGCAGTCGGATTTCTGAGTTT  650

seq1  GAGGCCAGCCAGGGCTACACAGAGAAACCCTGTCTCGAAAAACC-AAAAA  699
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  GAGGCCAGCCAGGGCTACACAGAGAAACCCTGTCTCGAAAAACCAAAAAA  700

seq1  AAAAAAAAAAAAAGGTCAGCTCCCCAGGCCTTCCCAGACTGGTGGGACTG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAAAAAAGGTCAGCTCCCCAGGCCTTCCCAGACTGGTGGGACTG  750

seq1  TGGGGCCGTGACCTCTCCAAGAAGTTGGTTGGGGAGCAGTCTGTGGTGTT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGCCGTGACCTCTCCAAGAAGTTGGTTGGGGAGCAGTCTGTGGTGTT  800

seq1  CTTTACCCATCGCTCTTACTGCCTTTTTGTTCCTCCACTGTCTGAAGAAA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTACCCATCGCTCTTACTGCCTTTTTGTTCCTCCACTGTCTGAAGAAA  850

seq1  TCAGATGAAGCTGGCTGAGAAGGTCAAAGGACTGTGGGCCAGAGGGGATA  899
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  TCAGATGAAGCTGGCTGAGAAGGTCAAAGGACTGTGGGCCAGA-GGGATA  899

seq1  TTTGGAGGGCTGTGGATATTCTGTTCTCATTGAGCA-CCCCCCCCCCCCC  948
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  TTTGGAGGGCTGTGGATATTCTGTTCTCATTGAGCACCCCCCCCCCCCCC  949

seq1  CGGAGCTTCTCTAGCTCGGGTGAAGCATGTGATGCCCACTGTTTAGTTGT  998
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  CGGAGCTTCTCTAGCTCGGGTG-AGCATGTGATGCCCACTGTTTAGTTGT  998

seq1  GTGTGTGGAGAAACATGTG-ATGTACCACTGTCTAGGCTGTGTGTGGCTC  1047
      ||||||||||||||||||| ||||| |||||| || ||||||||||||||
seq2  GTGTGTGGAGAAACATGTGAATGTAACACTGTTTA-GCTGTGTGTGGCTC  1047

seq1  AGGTTGCCTTCACTTGTGTTTACTTTGCAGTCCTGGGGATGATCAGGGTG  1097
      ||  |||  ||||||| |||||||||||||||||||||||||||||||  
seq2  AG--TGC--TCACTTG-GTTTACTTTGCAGTCCTGGGGATGATCAGGGGT  1092

seq1  TGTGCCCACGTACCCATGTGT-GTGTGTGCCCACGTACCCATGTGTATAC  1146
      ||||||||||||||||| ||| ||||||| ||||| |  |||||| ||||
seq2  TGTGCCCACGTACCCAT-TGTGGTGTGTG-CCACGCA-TCATGTG-ATAC  1138