BAC Information

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BAC

Clone NameB6Ng01-135J05
Chromosome10 (Build37)
Map Location 30,450,601 - 30,575,444
singlet/doubletdoublet
Overlap geneNcoa7, LOC382354, Hey2
Upstream geneLOC623064, LOC674389, Gm232, LOC667696, LOC100040542, 2610036L11Rik, LOC212815, Trmt11, Hint3
Downstream geneLOC654431, EG432448, Hddc2, Tpd52l1, LOC100041294, Ibrdc1, LOC666055, LOC667752, LOC100040638, Tcba1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-135J05.bB6Ng01-135J05.g
ACCDH935577DH935578
length3451,167
definitionDH935577|Mus musculus domesticus DNA, BAC clone: B6Ng01-135J05, 5' end.DH935578|Mus musculus domesticus DNA, BAC clone: B6Ng01-135J05, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(30,450,601 - 30,450,945)(30,574,270 - 30,575,444)
sequence
caggatagccagggtttcatacagggaccccatctctaaaatagaaaaga
aaaccttggaaggcagaaagatagctcagtggttaagagtgctggttgct
cttttagaggacctgggttttattttattcccagaagcacatggcagatc
agaatattctttaactctagttccaaggaatacaaccccccacccggcct
cttgaggtactgcaggtgtgtatggtatggagacatacatgtaggcagaa
tactcatacacataaataaaaagaataaatcttcaagaagagagagagga
aggaaggaaggaaggaaggaaggaaggaagggagggagggaggga
gaattctcagtgcgctttggtttgggatgattcttaccagacttttgggt
aacttcagggggagccaaaaggaacagtgagagaaatccaggcacaatat
taaacaaaagaaaactcaaactgagggaaaacttgaaataaaaagatttt
taaaaaggaacttgaacaggaacctcagaggaaaggctcaccaacagaat
acaagagatggaagagagaatctcagacattgatgataagatagaagaaa
cggatacctcagccaaagaaaatgttacatctaaagaaaaaagaaaaaaa
aattcaatcacaaaacatccaggaaatctggcacacaatgaaaaaaaatc
tatgaataatagtgataaaggaaggagaagaaacccaagtcaaagacata
gaaaatattttttaaaaaaatcatagaagaaaacttccccaacctaagaa
ggtaacatctaatgatgtacaagaaaaatgccaaataagaaacagactag
accagaaaagaaattcccctgacatataagaatgctttcctggggaaaga
aaacccagtgcccatggattcagtctctggtggtactggatttacaagct
gggttatctgaaagagatcttcaactatgggaccatggaaaattcattat
ctacattgggtatggaagcttctagttcagttgctttagagtcatctgta
ttttgtaaatacatgccaataaacttataggttcccaggatcaacttcag
tggaatcaaactttgctttttaatggaactttataagaaggaaaagttta
cagattctcaaggggaaattctcacaacagtagcattccagcttcgtgag
tgtccatagaattaaaagacattattatttgtagcacaggaagtgacaca
aacatccagatatgaacactggttgtccaattcctaagtctcacagagat
gtgacctatgtatgtgatcacacctatgtgcatgtttacacaactagggt
ttatatctcagatgaggctctcaggagaattgcacaaacatttggtagaa
gcatatccagtcagtcttctccctctcgggaggtattagtcatgtcatga
aactaattcagtctgacctcactcagggcctctccagctagttacagaag
gccttggaacattaggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_30450601_30450945
seq2: B6Ng01-135J05.b_51_395

seq1  CAGGATAGCCAGGGTTTCATACAGGGACCCCATCTCTAAAATAGAAAAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGATAGCCAGGGTTTCATACAGGGACCCCATCTCTAAAATAGAAAAGA  50

seq1  AAACCTTGGAAGGCAGAAAGATAGCTCAGTGGTTAAGAGTGCTGGTTGCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCTTGGAAGGCAGAAAGATAGCTCAGTGGTTAAGAGTGCTGGTTGCT  100

seq1  CTTTTAGAGGACCTGGGTTTTATTTTATTCCCAGAAGCACATGGCAGATC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTAGAGGACCTGGGTTTTATTTTATTCCCAGAAGCACATGGCAGATC  150

seq1  AGAATATTCTTTAACTCTAGTTCCAAGGAATACAACCCCCCACCCGGCCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATATTCTTTAACTCTAGTTCCAAGGAATACAACCCCCCACCCGGCCT  200

seq1  CTTGAGGTACTGCAGGTGTGTATGGTATGGAGACATACATGTAGGCAGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAGGTACTGCAGGTGTGTATGGTATGGAGACATACATGTAGGCAGAA  250

seq1  TACTCATACACATAAATAAAAAGAATAAATCTTCAAGAAGAGAGAGAGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCATACACATAAATAAAAAGAATAAATCTTCAAGAAGAGAGAGAGGA  300

seq1  AGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGGAGGGAGGGAGGGA  345
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGGAGGGAGGGAGGGA  345

seq1: chr10_30574270_30575444
seq2: B6Ng01-135J05.g_69_1235 (reverse)

seq1  CCCTAATG-TCCAGAGGCTTCTGTAACTAGCTGAGAAGGCACCTGAGTGA  49
      |||||||| ||||  | ||||||||||||||||   |||| |||||||||
seq2  CCCTAATGTTCCAAGGCCTTCTGTAACTAGCTGGAGAGGC-CCTGAGTGA  49

seq1  GTCAAGACTGAATATAGTTTCATGAACATTGACTATATACCT-CCGAAAG  98
      |   ||||||||| |||||||||| ||| |||||| |||||| |||| ||
seq2  GGTCAGACTGAAT-TAGTTTCATG-ACA-TGACTA-ATACCTCCCGAGAG  95

seq1  AGGAGAAGACTGACCTGGGATATGCTTTCTACAAAATGTTTTGTGC-ATT  147
       |||||||||||||   |||||||| |||||| ||||| ||||||| |||
seq2  -GGAGAAGACTGAC--TGGATATGC-TTCTACCAAATG-TTTGTGCAATT  140

seq1  CTCCCGGAGAGCCTCATCTGAGATATAAA-CCTAGTTGTGTAAAACATGC  196
      || || ||||||||||||||||||||||| ||||||||||| ||||||||
seq2  CT-CCTGAGAGCCTCATCTGAGATATAAACCCTAGTTGTGT-AAACATGC  188

seq1  ACATAGGTGTGATCACATACATAGGTCACATCTCTGTGAGACTTAGGAAT  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAGGTGTGATCACATACATAGGTCACATCTCTGTGAGACTTAGGAAT  238

seq1  TGGACAACCAGTGTTCATATCTGGATGTTTGTGTCACTTCCTGTGCTACA  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACAACCAGTGTTCATATCTGGATGTTTGTGTCACTTCCTGTGCTACA  288

seq1  AATAATAATGTCTTTTAATTCTATGGACACTCACGAAGCTGGAATGCTAC  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATAATGTCTTTTAATTCTATGGACACTCACGAAGCTGGAATGCTAC  338

seq1  TGTTGTGAGAATTTCCCCTTGAGAATCTGTAAACTTTTCCTTCTTATAAA  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGTGAGAATTTCCCCTTGAGAATCTGTAAACTTTTCCTTCTTATAAA  388

seq1  GTTCCATTAAAAAGCAAAGTTTGATTCCACTGAAGTTGATCCTGGGAACC  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCATTAAAAAGCAAAGTTTGATTCCACTGAAGTTGATCCTGGGAACC  438

seq1  TATAAGTTTATTGGCATGTATTTACAAAATACAGATGACTCTAAAGCAAC  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAGTTTATTGGCATGTATTTACAAAATACAGATGACTCTAAAGCAAC  488

seq1  TGAACTAGAAGCTTCCATACCCAATGTAGATAATGAATTTTCCATGGTCC  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACTAGAAGCTTCCATACCCAATGTAGATAATGAATTTTCCATGGTCC  538

seq1  CATAGTTGAAGATCTCTTTCAGATAACCCAGCTTGTAAATCCAGTACCAC  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGTTGAAGATCTCTTTCAGATAACCCAGCTTGTAAATCCAGTACCAC  588

seq1  CAGAGACTGAATCCATGGGCACTGGGTTTTCTTTCCCCAGGAAAGCATTC  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGACTGAATCCATGGGCACTGGGTTTTCTTTCCCCAGGAAAGCATTC  638

seq1  TTATATGTCAGGGGAATTTCTTTTCTGGTCTAGTCTGTTTCTTATTTGGC  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATGTCAGGGGAATTTCTTTTCTGGTCTAGTCTGTTTCTTATTTGGC  688

seq1  ATTTTTCTTGTACATCATTAGATGTTACCTTCTTAGGTTGGGGAAGTTTT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTCTTGTACATCATTAGATGTTACCTTCTTAGGTTGGGGAAGTTTT  738

seq1  CTTCTATGATTTTTTTAAAAAATATTTTCTATGTCTTTGACTTGGGTTTC  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTATGATTTTTTTAAAAAATATTTTCTATGTCTTTGACTTGGGTTTC  788

seq1  TTCTCCTTCCTTTATCACTATTATTCATAGATTTTTTTTCATTGTGTGCC  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCCTTCCTTTATCACTATTATTCATAGATTTTTTTTCATTGTGTGCC  838

seq1  AGATTTCCTGGATGTTTTGTGATTGAATTTTTTTTTCTTTTTTCTTTAGA  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTTCCTGGATGTTTTGTGATTGAATTTTTTTTTCTTTTTTCTTTAGA  888

seq1  TGTAACATTTTCTTTGGCTGAGGTATCCGTTTCTTCTATCTTATCATCAA  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAACATTTTCTTTGGCTGAGGTATCCGTTTCTTCTATCTTATCATCAA  938

seq1  TGTCTGAGATTCTCTCTTCCATCTCTTGTATTCTGTTGGTGAGCCTTTCC  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTGAGATTCTCTCTTCCATCTCTTGTATTCTGTTGGTGAGCCTTTCC  988

seq1  TCTGAGGTTCCTGTTCAAGTTCCTTTTTAAAAATCTTTTTATTTCAAGTT  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAGGTTCCTGTTCAAGTTCCTTTTTAAAAATCTTTTTATTTCAAGTT  1038

seq1  TTCCCTCAGTTTGAGTTTTCTTTTGTTTAATATTGTGCCTGGATTTCTCT  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCTCAGTTTGAGTTTTCTTTTGTTTAATATTGTGCCTGGATTTCTCT  1088

seq1  CACTGTTCCTTTTGGCTCCCCCTGAAGTTACCCAAAAGTCTGGTAAGAAT  1146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGTTCCTTTTGGCTCCCCCTGAAGTTACCCAAAAGTCTGGTAAGAAT  1138

seq1  CATCCCAAACCAAAGCGCACTGAGAATTC  1175
      |||||||||||||||||||||||||||||
seq2  CATCCCAAACCAAAGCGCACTGAGAATTC  1167