BAC Information

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BAC

Clone NameB6Ng01-135N21
Chromosome10 (Build37)
Map Location 101,455,072 - 101,631,472
singlet/doubletdoublet
Overlap genenone
Upstream genenone
Downstream geneMgat4c, LOC667652, Nts, Pamci, LOC382413, Cart1, Lrriq1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-135N21.bB6Ng01-135N21.g
ACCDH935799DH935800
length3021,042
definitionDH935799|Mus musculus domesticus DNA, BAC clone: B6Ng01-135N21, 5' end.DH935800|Mus musculus domesticus DNA, BAC clone: B6Ng01-135N21, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(101,631,171 - 101,631,472)(101,455,072 - 101,456,134)
sequence
aaagttatcttgggacccatgtagcctatgggcagagattggtgatggct
tcaagtcaatttgagattttaaagtctgtctcattttctatcttcaggtc
cattcctttttaaaacttttcatttgcagcctttaatattctgctcacac
attcaaaacattgagtgtgtcaaattgatgtgagtatggtggtatagaga
atctggtagtagctggaaaagaaaaaaagagagagagaaggttgggaaga
aaggaagaagataggaggagagagggaatgagggcgggagggagtgtgtg
tg
gaattccattatgcctcctcaaagagaggactatgacactattttgtttt
gcaatgtgtcttctgttgggaatttttagtttccgctgtagaatgagtat
ttttaaataaatactccagagtctaagatggatagtttgacccatgatgc
ttgaacaacattggttctgaaaagttctagttgcctcattccaaagtgat
cagcagtctctcaaacttttaattctttgtttgaggtggtcttttttttt
tttctaaaccagaaagtcacgactgtgaccatcttaaaaaaagaaaccga
gatgcttaatatgcaatatgttaataatgatatattaagcatgtatcctg
ggcctgtcattagtgtctgatgagaagctgttgtcagttaaatctcattg
ttttcacccaatcaaattaacaaaatgatagtggtataaacctatggata
catgaaaagcagacagagaaaggcagtgggtctatattttgttaggaaca
gggcacagtgcttcacatctcatgttcctgggagatcaaaggcttgactt
tgaagtgaagagtcagtgaccacatattttacagaggagctgattatttg
gtttatatattaaacctatgtcaactctggtacttgggcctacagtggat
ggataacactaggtatatagaataaagacattggtttgaagactcaggaa
gataacaggatgtttctgtggcattttgggcaaaatgctggtattaagaa
attaagaactgagtgtcttatgcgaaacaatcatttaaaataaaaccttg
tggatttcatgatacacagtgtgccacgggagttgcaacacagaagtgga
tgagcaaacacagaagtggatgctcacagtcagctattggatggacacag
ggccccaatagagagctagagaagtatccaggagcttgggggatggcacc
ctataggtggacacatatgactacagtactccggagctcttttctagctg
catatgtaacagaagatggctagtggcttcatgaaaagagag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_101631171_101631472
seq2: B6Ng01-135N21.b_54_355 (reverse)

seq1  CACACACACTCCCTCCCGCCCTCATTCCCTCTCTCCTCCTATCTTCTTCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACTCCCTCCCGCCCTCATTCCCTCTCTCCTCCTATCTTCTTCC  50

seq1  TTTCTTCCCAACCTTCTCTCTCTCTTTTTTTCTTTTCCAGCTACTACCAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTCCCAACCTTCTCTCTCTCTTTTTTTCTTTTCCAGCTACTACCAG  100

seq1  ATTCTCTATACCACCATACTCACATCAATTTGACACACTCAATGTTTTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTCTATACCACCATACTCACATCAATTTGACACACTCAATGTTTTGA  150

seq1  ATGTGTGAGCAGAATATTAAAGGCTGCAAATGAAAAGTTTTAAAAAGGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGTGAGCAGAATATTAAAGGCTGCAAATGAAAAGTTTTAAAAAGGAA  200

seq1  TGGACCTGAAGATAGAAAATGAGACAGACTTTAAAATCTCAAATTGACTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACCTGAAGATAGAAAATGAGACAGACTTTAAAATCTCAAATTGACTT  250

seq1  GAAGCCATCACCAATCTCTGCCCATAGGCTACATGGGTCCCAAGATAACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCCATCACCAATCTCTGCCCATAGGCTACATGGGTCCCAAGATAACT  300

seq1  TT  302
      ||
seq2  TT  302

seq1: chr10_101455072_101456134
seq2: B6Ng01-135N21.g_69_1110

seq1  GAATTCCATTATGCCTCCTCAAAGAGAGGACTATGACACTATTTTGTTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATTATGCCTCCTCAAAGAGAGGACTATGACACTATTTTGTTTT  50

seq1  GCAATGTGTCTTCTGTTGGGAATTTTTAGTTTCCGCTGTAGAATGAGTAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATGTGTCTTCTGTTGGGAATTTTTAGTTTCCGCTGTAGAATGAGTAT  100

seq1  TTTTAAATAAATACTCCAGAGTCTAAGATGGATAGTTTGACCCATGATGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAATAAATACTCCAGAGTCTAAGATGGATAGTTTGACCCATGATGC  150

seq1  TTGAACAACATTGGTTCTGAAAAGTTCTAGTTGCCTCATTCCAAAGTGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAACAACATTGGTTCTGAAAAGTTCTAGTTGCCTCATTCCAAAGTGAT  200

seq1  CAGCAGTCTCTCAAACTTTTAATTCTTTGTTTGAGGTGGTCTTTTTTTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAGTCTCTCAAACTTTTAATTCTTTGTTTGAGGTGGTCTTTTTTTTT  250

seq1  TTTCTAAACCAGAAAGTCACGACTGTGACCATCTTAAAAAAAGAAACCGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTAAACCAGAAAGTCACGACTGTGACCATCTTAAAAAAAGAAACCGA  300

seq1  GATGCTTAATATGCAATATGTTAATAATGATATATTAAGCATGTATCCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCTTAATATGCAATATGTTAATAATGATATATTAAGCATGTATCCTG  350

seq1  GGCCTGTCATTAGTGTCTGATGAGAAGCTGTTGTCAGTTAAATCTCATTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTGTCATTAGTGTCTGATGAGAAGCTGTTGTCAGTTAAATCTCATTG  400

seq1  TTTTCACCCAATCAAATTAACAAAATGATAGTGGTATAAACCTATGGATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCACCCAATCAAATTAACAAAATGATAGTGGTATAAACCTATGGATA  450

seq1  CATGAAAAGCAGACAGAGAAAGGCAGTGGGTCTATATTTTGTTAGGAACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAAAAGCAGACAGAGAAAGGCAGTGGGTCTATATTTTGTTAGGAACA  500

seq1  GGGCACAGTGCTTCACATCTCATGTTCCTGGGAGATCAAAGGCTTGACTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCACAGTGCTTCACATCTCATGTTCCTGGGAGATCAAAGGCTTGACTT  550

seq1  TGAAGTGAAGAGTCAGTGACCACATATTTTACAGAGGAGCTGATTATTTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGTGAAGAGTCAGTGACCACATATTTTACAGAGGAGCTGATTATTTG  600

seq1  GTTTATATATTAAACCTATGTCAACTCTGGTACTTGGGCCTACAGTGGAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTATATATTAAACCTATGTCAACTCTGGTACTTGGGCCTACAGTGGAT  650

seq1  GGATAACACTAGGTATATAGAATAAAGACATTGGTTTGAAGACTCAGGAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATAACACTAGGTATATAGAATAAAGACATTGGTTTGAAGACTCAGGAA  700

seq1  GATAACAGGATGTTTCTGTGGCATTTTGGGCAAAATGCTGGTATTAAGAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAACAGGATGTTTCTGTGGCATTTTGGGCAAAATGCTGGTATTAAGAA  750

seq1  ATTAAGAACTGAGTGTCTTATGCGAAACAATCATTTAAAATAAAACCTTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAGAACTGAGTGTCTTATGCGAAACAATCATTTAAAATAAAACCTTG  800

seq1  TGGATTTCATGATACACAGTGTGCCACGGGAGTTGCAAACACAGAAGTGG  850
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  TGGATTTCATGATACACAGTGTGCCACGGGAGTTGC-AACACAGAAGTGG  849

seq1  ATGAGCAAACACAGAAGTGGATGCTCACAGTCAGCTATTGGATGGAACAC  900
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  ATGAGCAAACACAGAAGTGGATGCTCACAGTCAGCTATTGGATGG-ACAC  898

seq1  AGGGCCCCCAATAGAGGAGCTAGAGAAAGTATCCAAGGAGCTTGGGGGAT  950
      |||| |||||||||| ||||||||| |||||||| |||||||||||||| 
seq2  AGGG-CCCCAATAGA-GAGCTAGAG-AAGTATCC-AGGAGCTTGGGGGA-  943

seq1  TGGCAACCCTATAGGTGGAACAACATTATGAACTAACCAGTACTCCCGGA  1000
      |||| ||||||||||||||   ||| |||| ||||  ||||||| |||||
seq2  TGGC-ACCCTATAGGTGGA--CACA-TATG-ACTA--CAGTACT-CCGGA  985

seq1  GCTCCTGTCTCTAGCTGCATATGTATCAGAAGATGGCCTAGTTGGCTATC  1050
      ||||   | |||||||||||||||| |||||||||| |||| ||||| ||
seq2  GCTC--TTTTCTAGCTGCATATGTAACAGAAGATGG-CTAG-TGGCT-TC  1030

seq1  ATTGAGAAGAGAG  1063
      | ||| |||||||
seq2  A-TGAAAAGAGAG  1042