BAC Information

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BAC

Clone NameB6Ng01-136L23
Chromosome10 (Build37)
Map Location 41,437,185 - 41,438,305
singlet/doubletsinglet
Overlap genenone
Upstream gene9030224M15Rik, Cdc40, Wasf1, Gpr6, A530089I17Rik, LOC633979, Zbtb24, Mical1, Smpd2, Ppil6, Cd164, 5033413D22Rik, EG629461
Downstream gene2410017P07Rik, Sesn1, Armc2, 1700016J18Rik, LOC624784, Foxo3a, Lace1, LOC666540, Snx3, Nr2e1, c222389, Ostm1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-136L23.bB6Ng01-136L23.g
ACCDH936438DH936439
length1,1111,211
definitionDH936438|Mus musculus domesticus DNA, BAC clone: B6Ng01-136L23, 5' end.DH936439|Mus musculus domesticus DNA, BAC clone: B6Ng01-136L23, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttggcttgtgcagacaagactgattttgaaccaagtctattcat
attcactctgaaatcttaagtggttttttttttcaaactatcttatactt
ttatgagacaattctcaattcttatttgaaacattcaaatagttataagt
ggttacactttttgtatggtaatttgttttcccaatatattttccttgtt
tttatcctgagctgggagtctggcccaggtcaaaccctttaccactgagt
taaaagccagccatctatttcacacaaaaatgattttattagtaagtgag
caggtgtagaccctttcctaagtgttcagggctgagataaggccctggtg
ggatttttccctttctttctaaccttaatgacagagctcatattcctgtg
gaggaaagtgaaactggagagattacaggatggagtttggacagaattca
ctgcagacatttccaaggccaggaggctgacacttacagtagatccactg
cttaaaccagagggttggggtttgggggcttgcgctctgctacgaacagc
tctaaatacaatcccctgtagcaaaccacccgtggctggggctcctagct
ggtgcttctcaccatgaagatgagtcacacttgttcctttttccagaagg
tccacacttgcgcataccttttgtttatgttgcacaccttttgatacttc
ctagggaaatagattgtcctttaaaattgcttttcctaggcagggcatgg
tgacccaaacctaatcccagctctccgcaggtagatctccatgtggtcca
ggccagccagggctacctactgagaccctgtctcaaatgtatatgtaaaa
aaaaaaaaaaaaaaagtccttttttataaacaggcatggctgtacatacc
tatgacttatagcatgtggaagtgtggacaggacaagttcacttcaagat
caattgttgcatagtaagttcggggcagcctggcctacgcttctcagaaa
tgaaagaatgcttttttgttttgtcacagttttgaaactgctcttggact
cctgatctaacagtgttacatactagctgcatacctccaccactggaaat
taggtaataca
gaattcttcatctgcttcagagctactaagagctggctccccgagcccat
ccagcgatgagcacaggctccttttcctagagacctccgctaattgatct
ttcttcttttccctttttcctctttttcttctaatctctctccaggtatt
cctacctaaccttaacttttcctcgggttcaagacccttggaaaggcctg
tatacttattttgtgtaccatattttctctttgctcctactctctctccc
cgctttacttctgatagcttgtcctgaatttcatctagaatccgccctgc
cttaaccacttgataacatgtgaaaaggaacaaaagggcttctaacacta
gaaaaaattcaaggccaaatataccttgcaaagccattttccactttact
tctgatagactgtcttgaatttccttagaaagttcaagatcagacttacc
tcgtaaagctgtactcactggtactctcgttccccagctgaaaagttctg
aattcatacagttgaatccttcttaacagtctgctttacgggaaccttta
ttaccgcgacccgcagttctggttctggaatgagggatcttccttgcgcc
agtcccgagttttttctcgtcccggaattcggcaccaattgttattaaac
gcgttctcacgcccggccaggaagaacaccacagaccagaatcttctgcg
gcaaaactttattgcttacatcttcaggagcaagagtgtaagaagcaaga
gagagagaaaacgaaaccccgtccctattaaggagaattttccttcgcct
aggacgtgtcactccctgattggctgcagcccatcggccgagttgacgtc
acgaggaaggcagagcacatggagtgaagaaccaccctcggcacatgcgc
agattatttgtttaccacttagaacacagctgtcagcgccatctgtaacg
gcgaatgtggggcgcggctcccacagacatacttacattctagtcaatct
ggaggaacctcttatagtaaaaactagtgtaagaaaatttattctacctt
gagcataaaaaaaaagtgatcttggagcagctgaataactggatgctaat
aagagggcttattccagtcaacagccaaagaaaagaaggcttttaagaat
tgtatgcgtgcacgcataatactgggcgcctttaatatgtaatataccga
gagaacaactg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_41437185_41438305
seq2: B6Ng01-136L23.b_44_1154

seq1  GAATTCTTGGCTTGTGCAGACAAGACTGATTTTGAACCAAGTCTATTCAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTGGCTTGTGCAGACAAGACTGATTTTGAACCAAGTCTATTCAT  50

seq1  ATTCACTCTGAAATCTTAAGTGGTTTTTTTTTTCAAACTATCTTATACTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCACTCTGAAATCTTAAGTGGTTTTTTTTTTCAAACTATCTTATACTT  100

seq1  TTATGAGACAATTCTCAATTCTTATTTGAAACATTCAAATAGTTATAAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGAGACAATTCTCAATTCTTATTTGAAACATTCAAATAGTTATAAGT  150

seq1  GGTTACACTTTTTGTATGGTAATTTGTTTTCCCAATATATTTTCCTTGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTACACTTTTTGTATGGTAATTTGTTTTCCCAATATATTTTCCTTGTT  200

seq1  TTTATCCTGAGCTGGGAGTCTGGCCCAGGTCAAACCCTTTACCACTGAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATCCTGAGCTGGGAGTCTGGCCCAGGTCAAACCCTTTACCACTGAGT  250

seq1  TAAAAGCCAGCCATCTATTTCACACAAAAATGATTTTATTAGTAAGTGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAGCCAGCCATCTATTTCACACAAAAATGATTTTATTAGTAAGTGAG  300

seq1  CAGGTGTAGACCCTTTCCTAAGTGTTCAGGGCTGAGATAAGGCCCTGGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTGTAGACCCTTTCCTAAGTGTTCAGGGCTGAGATAAGGCCCTGGTG  350

seq1  GGATTTTTCCCTTTCTTTCTAACCTTAATGACAGAGCTCATATTCCTGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTTTTCCCTTTCTTTCTAACCTTAATGACAGAGCTCATATTCCTGTG  400

seq1  GAGGAAAGTGAAACTGGAGAGATTACAGGATGGAGTTTGGACAGAATTCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAAAGTGAAACTGGAGAGATTACAGGATGGAGTTTGGACAGAATTCA  450

seq1  CTGCAGACATTTCCAAGGCCAGGAGGCTGACACTTACAGTAGATCCACTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCAGACATTTCCAAGGCCAGGAGGCTGACACTTACAGTAGATCCACTG  500

seq1  CTTAAACCAGAGGGTTGGGGTTTGGGGGCTTGCGCTCTGCTACGAACAGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAACCAGAGGGTTGGGGTTTGGGGGCTTGCGCTCTGCTACGAACAGC  550

seq1  TCTAAATACAATCCCCTGTAGCAAACCACCCGTGGCTGGGGCTCCTAGCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAATACAATCCCCTGTAGCAAACCACCCGTGGCTGGGGCTCCTAGCT  600

seq1  GGTGCTTCTCACCATGAAGATGAGTCACACTTGTTCCTTTTTCCAGAAGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGCTTCTCACCATGAAGATGAGTCACACTTGTTCCTTTTTCCAGAAGG  650

seq1  TCCACACTTGCGCATACCTTTTGTTTATGTTGCACACCTTTTGATACTTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACACTTGCGCATACCTTTTGTTTATGTTGCACACCTTTTGATACTTC  700

seq1  CTAGGGAAATAGATTGTCCTTTAAAATTGCTTTTCCTAGGCAGGGCATGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGGAAATAGATTGTCCTTTAAAATTGCTTTTCCTAGGCAGGGCATGG  750

seq1  TGACCCAAACCTAATCCCAGCTCTCCGCAGGTAGATCTCCATGTGGTCCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCCAAACCTAATCCCAGCTCTCCGCAGGTAGATCTCCATGTGGTCCA  800

seq1  GGCCAGCCAGGGCTACCTACTGAGACCCTGTCTCAAATGTATATGTAAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCAGCCAGGGCTACCTACTGAGACCCTGTCTCAAATGTATATGTAAAA  850

seq1  AAAAAAAAAAAAAAAGTCC-TTTTTATAAACAGGCATGGCTGTACATACC  899
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  AAAAAAAAAAAAAAAGTCCTTTTTTATAAACAGGCATGGCTGTACATACC  900

seq1  TATGAC-TATAGCATGTGGAAGTGTGGACAGGACAAGTTCACTTCAAGAT  948
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  TATGACTTATAGCATGTGGAAGTGTGGACAGGACAAGTTCACTTCAAGAT  950

seq1  CAATTGTTGCATAGTAAGTTCGGGGCCAGCCTGGCCTACGC-TCTCAGAA  997
      ||||||||||||||||||||||||| ||||||||||||||| |||||| |
seq2  CAATTGTTGCATAGTAAGTTCGGGG-CAGCCTGGCCTACGCTTCTCAG-A  998

seq1  AATGAAAAGAATTGCTTTTTTGGTTTTGTCACAGTTTTTGAAACTGCTCT  1047
      |||| |||||| ||||||||| |||||||||||| |||||||||||||| 
seq2  AATG-AAAGAA-TGCTTTTTT-GTTTTGTCACAG-TTTTGAAACTGCTC-  1043

seq1  TTGGACTCCTGATCT-ACAGTGTTTACATACTTAGCCTGCATACTTCCCA  1096
      ||||||||||||||| |||||| |||||||| ||| |||||||| | |||
seq2  TTGGACTCCTGATCTAACAGTG-TTACATAC-TAG-CTGCATACCT-CCA  1089

seq1  CCACTGTGAAATTTAGGTAAATACA  1121
      |||||| |||| |||||| ||||||
seq2  CCACTG-GAAA-TTAGGT-AATACA  1111