BAC Information

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BAC

Clone NameB6Ng01-137C18
Chromosome10 (Build37)
Map Location 71,398,331 - 71,504,219
singlet/doubletdoublet
Overlap gene1700049L16Rik
Upstream geneBicc1, LOC622551, C730027H18Rik, Tfam, Ube2d1, LOC665472, Zcd1, Ipmk, LOC100039860, LOC216081, EG216082, LOC622812, EG327767
Downstream geneLOC100040505, Zwint
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-137C18.bB6Ng01-137C18.g
ACCDH936757DH936758
length1,2391,024
definitionDH936757|Mus musculus domesticus DNA, BAC clone: B6Ng01-137C18, 5' end.DH936758|Mus musculus domesticus DNA, BAC clone: B6Ng01-137C18, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(71,502,965 - 71,504,219)(71,398,331 - 71,399,307)
sequence
gaattcttccagggaaagtttggtgaaaaggattctgtccagtgtaggta
atatgctctagaatgagctatgaaaataaagggaaacttgatcatgtatg
cctagcatgctctcctattagaaaactgtctggaacctccctcaccctga
ggaggcaggtgaggccagatggttaagtcaatctttctgttgctgaagga
ccaaactgtcctgaggcaccagatgttataggaacagagcaggtgctcat
cacacagccctgggaggaagcaagaagagacggattgtatctcagactgt
tattcttgcttcatatgttaaatgaatattaagaaatcacatgatgtgtc
ctgctacagaacttcttgtgcctcagaagaaacatctgtcagagaaaggc
ttaccctgaaaatcctctcagacagtaacagtgagtgacaccttgccctt
tacaggtatagacagcatgtagcttatccctcgctctgccattgctagat
gggctgacaatacagggttttgttttggttttcggtttttggtttttgga
gggttttttgtcatttcaaatgtagagaagtcattcacatagcccccttt
ctttcagtgtgatttccccacagggcactgctaaagatttccagaataag
ataaaattgataggttatataaaatcttcacgaatattaaatgccatatt
ttacaatggaaaatactgaactactgttaaatacaaaactccaaccgaaa
caaatgagcaagcaaatgaaaagcaagacacctaaacaaataaaaatggc
tgccctgatgtcagagaaaacaaaaggctagaaggaaaaagaaggaaacg
tgactagtggctggcttagctctgtgccccctcatttggtcacaatatgt
caaacatgaatattcatttaatcaaaatcatgatctgctatttaaagacg
atgagagctcagaggtaagcaccgtgttgtgatagggccggaaagtgaag
aaagctgaattatcatatttccacagtgaacagccgacggataaaggcta
tataaccctcagaaacagccatgtaggcgtgctattcagagatgcaagag
aatatagggagacagctgatcagtcggaagcggtcgcatctggtgcaaca
ggaaggaacccgcaaaggcacacaggaattggcttttgggcgcaactgat
aactgctggccttacatgctaggtgagcgtggagacaag
gaattctgtcttgtcttggagattacagttaagtgattggatgaatctca
aaagagactttcaatttgtggacttttaactttgttgagacttctataga
ctatgggaactttggaagttggtctaaatatacttttttattatgttata
tttaggtatggacccccagactcatgtgtttgaataagcctactgggggc
caaggagtggaatgtgatggtttgtatatttttggcccaggaagtggtac
catttggaggtgtggccttgttggagtaggtgtgacctggttggagtagg
tatgtcactgtgggtgtgagcttaagaccctcatcctaatttcctggaag
tcagtctttcactagcagccttcagatgaactctcagctctgcctgcacc
atgcctgcctagagatgcaatgtgcccacattgatgataatggactgaac
ctctgaatctgtaaaccaaccccaaataaaattttttaaatttttttata
agacttgccttagtcatggtgtctgttcacagcagtcaaaccctaagaca
cttgtgaaatcttaaaaatcttaggctccacccaaggtgcctcctggggc
caaccaactgtgacatcaatgtcaacaaggttctgcttgaaactgtgcag
gacatcaagggtgccaccaagctggttaggtcctgaaattgtggcaacaa
actatgtttttccttttgtagattacagtatcttttctgctttattgatc
agctctagagatgtgctgatattaataatggatccaaaaaagcagccatg
cccacacctgctcatcctctggtgagtctagcacctaaggttgacccaga
tgaagatgataaacttcctcccagagctttcattggttttgctcaatgaa
aatggttattatgcagaaagcactcgcaatggtgagacactctttctgtt
gatgctgatgaattctcccaagtctaatactaaactcacaaggaggactg
ggtgcaatttcctcaaagtctttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_71502965_71504219
seq2: B6Ng01-137C18.b_50_1288 (reverse)

seq1  CTTGTCTCAACG-TCACCTGTGCATGTAAAGCACCAAGCAGTTTTATCAG  49
      |||||||| ||| ||||||  |||||||| |   | |||||  |||||||
seq2  CTTGTCTCCACGCTCACCT-AGCATGTAAGG---CCAGCAG--TTATCAG  44

seq1  GTTTGCCGCCCAAACAGCAATTTCCTGTGTGCCTTCTGCGGTCCCTTTCC  99
        ||| |||||||| ||| | |||||||||||||| |||||   | ||||
seq2  --TTG-CGCCCAAA-AGCCAATTCCTGTGTGCCTT-TGCGGGTTCCTTCC  89

seq1  TGTTGCA-CAGATGCGACCGCTTCCGACTGTATCAGCTGGTTCTCCTAAT  148
      ||||||| |||||||||||||||||||||| ||||||||  |||||  ||
seq2  TGTTGCACCAGATGCGACCGCTTCCGACTG-ATCAGCTG--TCTCCCTAT  136

seq1  ATCTCTC-TGCATCTCTGAATAGCACGCCTACATGGCTGTTTCTGAGGGT  197
      || |||| ||||||||||||||||||||||||||||||||||||||||||
seq2  AT-TCTCTTGCATCTCTGAATAGCACGCCTACATGGCTGTTTCTGAGGGT  185

seq1  TTTATTAATAGGCTTTATCTGTCGGGCTGTTCACTGTGG-AATATGATAA  246
      | |    |||| ||||||| ||| ||||||||||||||| ||||||||||
seq2  TAT----ATAGCCTTTATCCGTC-GGCTGTTCACTGTGGAAATATGATAA  230

seq1  TTCAGCTTTCTTTCACTTTCCGGCCCTTATCAC-ACAC-GTGCTTACTTC  294
      |||||||||| ||||||||||||||| |||||| |||| |||||||| ||
seq2  TTCAGCTTTC-TTCACTTTCCGGCCC-TATCACAACACGGTGCTTACCTC  278

seq1  TGAGCTCTCATCGTCTTTAAATAGCAGATCATGATTTTGATTAAATGAAT  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCTCTCATCGTCTTTAAATAGCAGATCATGATTTTGATTAAATGAAT  328

seq1  ATTCATGTTTGACATATTGTGACCAAATGAGGGGGCACAGAGCTAAGCCA  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATGTTTGACATATTGTGACCAAATGAGGGGGCACAGAGCTAAGCCA  378

seq1  GCCACTAGTCACGTTTCCTTCTTTTTCCTTCTAGCCTTTTGTTTTCTCTG  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACTAGTCACGTTTCCTTCTTTTTCCTTCTAGCCTTTTGTTTTCTCTG  428

seq1  ACATCAGGGCAGCCATTTTTATTTGTTTAGGTGTCTTGCTTTTCATTTGC  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCAGGGCAGCCATTTTTATTTGTTTAGGTGTCTTGCTTTTCATTTGC  478

seq1  TTGCTCATTTGTTTCGGTTGGAGTTTTGTATTTAACAGTAGTTCAGTATT  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTCATTTGTTTCGGTTGGAGTTTTGTATTTAACAGTAGTTCAGTATT  528

seq1  TTCCATTGTAAAATATGGCATTTAATATTCGTGAAGATTTTATATAACCT  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCATTGTAAAATATGGCATTTAATATTCGTGAAGATTTTATATAACCT  578

seq1  ATCAATTTTATCTTATTCTGGAAATCTTTAGCAGTGCCCTGTGGGGAAAT  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAATTTTATCTTATTCTGGAAATCTTTAGCAGTGCCCTGTGGGGAAAT  628

seq1  CACACTGAAAGAAAGGGGGCTATGTGAATGACTTCTCTACATTTGAAATG  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACTGAAAGAAAGGGGGCTATGTGAATGACTTCTCTACATTTGAAATG  678

seq1  ACAAAAAACCCTCCAAAAACCAAAAACCGAAAACCAAAACAAAACCCTGT  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAAAACCCTCCAAAAACCAAAAACCGAAAACCAAAACAAAACCCTGT  728

seq1  ATTGTCAGCCCATCTAGCAATGGCAGAGCGAGGGATAAGCTACATGCTGT  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTCAGCCCATCTAGCAATGGCAGAGCGAGGGATAAGCTACATGCTGT  778

seq1  CTATACCTGTAAAGGGCAAGGTGTCACTCACTGTTACTGTCTGAGAGGAT  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATACCTGTAAAGGGCAAGGTGTCACTCACTGTTACTGTCTGAGAGGAT  828

seq1  TTTCAGGGTAAGCCTTTCTCTGACAGATGTTTCTTCTGAGGCACAAGAAG  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAGGGTAAGCCTTTCTCTGACAGATGTTTCTTCTGAGGCACAAGAAG  878

seq1  TTCTGTAGCAGGACACATCATGTGATTTCTTAATATTCATTTAACATATG  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTAGCAGGACACATCATGTGATTTCTTAATATTCATTTAACATATG  928

seq1  AAGCAAGAATAACAGTCTGAGATACAATCCGTCTCTTCTTGCTTCCTCCC  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAAGAATAACAGTCTGAGATACAATCCGTCTCTTCTTGCTTCCTCCC  978

seq1  AGGGCTGTGTGATGAGCACCTGCTCTGTTCCTATAACATCTGGTGCCTCA  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCTGTGTGATGAGCACCTGCTCTGTTCCTATAACATCTGGTGCCTCA  1028

seq1  GGACAGTTTGGTCCTTCAGCAACAGAAAGATTGACTTAACCATCTGGCCT  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACAGTTTGGTCCTTCAGCAACAGAAAGATTGACTTAACCATCTGGCCT  1078

seq1  CACCTGCCTCCTCAGGGTGAGGGAGGTTCCAGACAGTTTTCTAATAGGAG  1144
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTGCCTCCTCAGGGTGAGGGAGGTTCCAGACAGTTTTCTAATAGGAG  1128

seq1  AGCATGCTAGGCATACATGATCAAGTTTCCCTTTATTTTCATAGCTCATT  1194
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATGCTAGGCATACATGATCAAGTTTCCCTTTATTTTCATAGCTCATT  1178

seq1  CTAGAGCATATTACCTACACTGGACAGAATCCTTTTCACCAAACTTTCCC  1244
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAGCATATTACCTACACTGGACAGAATCCTTTTCACCAAACTTTCCC  1228

seq1  TGGAAGAATTC  1255
      |||||||||||
seq2  TGGAAGAATTC  1239

seq1: chr10_71398331_71399307
seq2: B6Ng01-137C18.g_116_1089

seq1  AAAGAGACTTTCAATTTGTGGACTTTTAACTTTGTTGAGACTTCTATAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAGACTTTCAATTTGTGGACTTTTAACTTTGTTGAGACTTCTATAGA  50

seq1  CTATGGGAACTTTGGAAGTTGGTCTAAATATACTTTTTTATTATGTTATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGGGAACTTTGGAAGTTGGTCTAAATATACTTTTTTATTATGTTATA  100

seq1  TTTAGGTATGGACCCCCAGACTCATGTGTTTGAATAAGCCTACTGGGGGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGGTATGGACCCCCAGACTCATGTGTTTGAATAAGCCTACTGGGGGC  150

seq1  CAAGGAGTGGAATGTGATGGTTTGTATATTTTTGGCCCAGGAAGTGGTAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGAGTGGAATGTGATGGTTTGTATATTTTTGGCCCAGGAAGTGGTAC  200

seq1  CATTTGGAGGTGTGGCCTTGTTGGAGTAGGTGTGACCTGGTTGGAGTAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTGGAGGTGTGGCCTTGTTGGAGTAGGTGTGACCTGGTTGGAGTAGG  250

seq1  TATGTCACTGTGGGTGTGAGCTTAAGACCCTCATCCTAATTTCCTGGAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTCACTGTGGGTGTGAGCTTAAGACCCTCATCCTAATTTCCTGGAAG  300

seq1  TCAGTCTTTCACTAGCAGCCTTCAGATGAACTCTCAGCTCTGCCTGCACC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTCTTTCACTAGCAGCCTTCAGATGAACTCTCAGCTCTGCCTGCACC  350

seq1  ATGCCTGCCTAGAGATGCAATGTGCCCACATTGATGATAATGGACTGAAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCTGCCTAGAGATGCAATGTGCCCACATTGATGATAATGGACTGAAC  400

seq1  CTCTGAATCTGTAAACCAACCCCAAATAAAATTTTTTAAATTTTTTTATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGAATCTGTAAACCAACCCCAAATAAAATTTTTTAAATTTTTTTATA  450

seq1  AGACTTGCCTTAGTCATGGTGTCTGTTCACAGCAGTCAAACCCTAAGACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTTGCCTTAGTCATGGTGTCTGTTCACAGCAGTCAAACCCTAAGACA  500

seq1  CTTGTGAAATCTTAAAAATCTTAGGCTCCACCCAAGGTGCCTCCTGGGGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTGAAATCTTAAAAATCTTAGGCTCCACCCAAGGTGCCTCCTGGGGC  550

seq1  CAACCAACTGTGACATCAATGTCAACAAGGTTCTGCTTGAAACTGTGCAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCAACTGTGACATCAATGTCAACAAGGTTCTGCTTGAAACTGTGCAG  600

seq1  GACATCAAGGGTGCCACCAAGCTGGTTAGGTCCTGAAATTGTGGCAACAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATCAAGGGTGCCACCAAGCTGGTTAGGTCCTGAAATTGTGGCAACAA  650

seq1  ACTATGTTTTTCCTTTTGTAGATTACAGTATCTTTTCTGCTTTATTGATC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATGTTTTTCCTTTTGTAGATTACAGTATCTTTTCTGCTTTATTGATC  700

seq1  AGCTCTAGAGATGTGCTGATATTAATAATGGATCCAAAAAAGCAGCCATG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCTAGAGATGTGCTGATATTAATAATGGATCCAAAAAAGCAGCCATG  750

seq1  CCCACACCTGCTCATCCTCTGGTGAGTCTAGCACCTAAGGTTGACCCAGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACACCTGCTCATCCTCTGGTGAGTCTAGCACCTAAGGTTGACCCAGA  800

seq1  TGAAGATGATAAACTTCCTCCCAGAGC-TTCATTGGTTTTGCTCAATGAA  849
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  TGAAGATGATAAACTTCCTCCCAGAGCTTTCATTGGTTTTGCTCAATGAA  850

seq1  AATGGTTATTATGCAGAAAGCACTCGCAAT-GTGAGACACTCTTTCTGTT  898
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  AATGGTTATTATGCAGAAAGCACTCGCAATGGTGAGACACTCTTTCTGTT  900

seq1  GATGCTGATGAAATCTCCCCAAGTCTAATACTAAACTCCACAAGGAAGGA  948
      |||||||||||| ||| |||||||||||||||||||| ||||||| ||||
seq2  GATGCTGATGAATTCT-CCCAAGTCTAATACTAAACT-CACAAGG-AGGA  947

seq1  CTGGGTGCCAATTTCCCTCAAAGTCTTTG  977
      ||||||| |||||| ||||||||||||||
seq2  CTGGGTG-CAATTT-CCTCAAAGTCTTTG  974