BAC Information

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BAC

Clone NameB6Ng01-137E11
Chromosome10 (Build37)
Map Location 19,533,807 - 19,723,222
singlet/doubletdoublet
Overlap geneSlc35d3, Pex7, Map3k5
Upstream genePerp, Tnfaip3, Tpi-rs5, EG637620, Olig3, Ifngr1, Il22ra2, Il20ra
Downstream geneMtap7, EG621697, Bclaf1, 2610016C23Rik, LOC382344, Pde7b, LOC667202, Ahi1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-137E11.bB6Ng01-137E11.g
ACCDH936837DH936838
length1,165364
definitionDH936837|Mus musculus domesticus DNA, BAC clone: B6Ng01-137E11, 5' end.DH936838|Mus musculus domesticus DNA, BAC clone: B6Ng01-137E11, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(19,722,045 - 19,723,222)(19,533,807 - 19,534,176)
sequence
gaattcactgctgcattggcatcgccacttctaacccaggagcaaatgca
actgaagcgggttcagctgcactctccttggtgtccaaggctggtccatg
tctaagcagagccagggagagagccagggaggggggaccagctctttgtg
gtttctcttcctcttccctgatgcactgtttaaatggctgcttttgtccc
ctgcagctctcctttctgtcgaagtcacacttactgcaaactagaaacaa
agttaagctgccagcggcccctgcacaaggacagcttttctcagtagcac
agagctcaggaaactgaggctacagaaattgctctgtattatttccaccc
tttgcaactgaacgacctgactagaaacagtctgaataagaaatctgggt
tgtagctgagcagtggtagtgcatgcctttaatcccagcacttgggaggc
agaggcagtggatttctgagtttgaggccagcctggtctacagatttctg
agtttgaggccagcctggtctacagagtgagttccaggacagccagggct
acacagagaaaccctgtctcaaagaaaaaaaaaaaaaaagaaagaaaaag
aaaaagaaatctgggttatgctgactatagttcatgccccagagcctata
aaaaacaaacaaacaaaaaagccaggtaagatggtataccatctcagcac
ttagaaataaaatggacataggctaattcctggagcctcccccccccccc
ccctctctctctctctctctctctggtagagaattccctgagggcatcct
ctgtcctccacggtaatcactgccatctgatacttggtcaaagatgtcaa
aaacacactgaagaaaagctaacagcttaataaatggtgctgcagaaagc
agacgtccacaggttgaaaaatgaaattcagcttataatctatcacactt
caaaagaaaaaaaatattatttccatcactcaagagctcatttaaaccaa
aaggagtttgagtccaaacaaacgaaaaccaagaatgatgaagctgcctg
actctttcaccagggctgacgtgctaaactaagaagacaggttagattac
ctgcagagactagccaacttgaaaaaaaactgaagaaagtttcccaaggt
ctggggaaggggggc
atcacagactgaagtctgccaagggtcatcatgggccccagatacctcgt
ccaactgcctatatcttccacatctctctagtaagaggacatttaatctt
ccaatcatcactaagctattggagttcagttccctgtgagagcaccatgc
tcataaggaacttgcgtaccccctctccggtgagcctggctgctgcttgc
acatttcaggaggctcagttccaaaccttggtggtggagggatggataat
tagtttcctttgtccctatttggaatgtgctagtagacaggcagacagac
agacaggcacgcaggcagatgagggggaaggaagagagggaaggaagaag
agtaagggagagag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_19722045_19723222
seq2: B6Ng01-137E11.b_49_1212 (reverse)

seq1  CCCCCCATCCCCAGCCCTTTGGGAAACCTCTCTCAGTTTTCTTTCAAGTT  50
      |||||| ||||||| || ||||||||| |   |||||||| |||||||||
seq2  CCCCCCTTCCCCAGACC-TTGGGAAACTTTCTTCAGTTTTTTTTCAAGTT  49

seq1  GGCTTTGTCTTCCTGCAGGCTAATCTATACCTGTGCTTCTCTAGTTCTGC  100
      ||| | ||||  ||||||| ||||||| |||||| ||||| |||||  ||
seq2  GGC-TAGTCT--CTGCAGG-TAATCTA-ACCTGT-CTTCT-TAGTTTAGC  92

seq1  TCCGTCCGCCCTTGGTGAAAGAGTCAGGCAGCTTCATTCATTCTTGGTCT  150
        |||| |||| |||||||||||||||||||||||| ||||||||||| |
seq2  -ACGTCAGCCC-TGGTGAAAGAGTCAGGCAGCTTCA-TCATTCTTGGTTT  139

seq1  TCGTTTGTCTTGGACTCAAACTCCTTTTGTGTTTAAATTGAGCTCTTTGG  200
      |||||||| |||||||||||||||||||| ||||||| ||||||| ||| 
seq2  TCGTTTGT-TTGGACTCAAACTCCTTTTG-GTTTAAA-TGAGCTC-TTGA  185

seq1  TTGATTGGAATTGAT-TTTTTTTTCTTTTGAAGTGTGATAGATTATGAGC  249
       ||| ||||| | || |||||||||||||||||||||||||||||| |||
seq2  GTGA-TGGAAATAATATTTTTTTTCTTTTGAAGTGTGATAGATTATAAGC  234

seq1  TGAATTTCATTTTTCTACCTGTGGACGTCTGCTTTCTGCAGCACCATTTA  299
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  TGAATTTCATTTTTCAACCTGTGGACGTCTGCTTTCTGCAGCACCATTTA  284

seq1  TTAAGCTGTAGGCTTTTCTTCAGTGTGTTTTTGACATCTTTGA-CAAGTA  348
      |||||||||  |||||||||||||||||||||||||||||||| ||||||
seq2  TTAAGCTGTTAGCTTTTCTTCAGTGTGTTTTTGACATCTTTGACCAAGTA  334

seq1  TCAGATGGCAGTGATTACCGTGGAGGACAGAGGATGCCCTCAGGGAATTC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGATGGCAGTGATTACCGTGGAGGACAGAGGATGCCCTCAGGGAATTC  384

seq1  TCTACCAGAGAGAGAGAGAGAGAGAGAGAGGGGGGGGGGGGGAGGCTCCA  448
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  TCTACCAGAGAGAGAGAGAGAGAGAGAGGGGGGGGGGGGGGGAGGCTCCA  434

seq1  GGAATTAGCCTATGTCCATTTTATTTCTAAGTGCTGAGATGGTATACCAT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATTAGCCTATGTCCATTTTATTTCTAAGTGCTGAGATGGTATACCAT  484

seq1  CTTACCTGGCTTTTTTGTTTGTTTGTTTTTTATAGGCTCTGGGGCATGAA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACCTGGCTTTTTTGTTTGTTTGTTTTTTATAGGCTCTGGGGCATGAA  534

seq1  CTATAGTCAGCATAACCCAGATTTCTTTTTCTTTTTCTTTCTTTTTTTTT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATAGTCAGCATAACCCAGATTTCTTTTTCTTTTTCTTTCTTTTTTTTT  584

seq1  TTTTTTCTTTGAGACAGGGTTTCTCTGTGTAGCCCTGGCTGTCCTGGAAC  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTCTTTGAGACAGGGTTTCTCTGTGTAGCCCTGGCTGTCCTGGAAC  634

seq1  TCACTCTGTAGACCAGGCTGGCCTCAAACTCAGAAATCTGTAGACCAGGC  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTCTGTAGACCAGGCTGGCCTCAAACTCAGAAATCTGTAGACCAGGC  684

seq1  TGGCCTCAAACTCAGAAATCCACTGCCTCTGCCTCCCAAGTGCTGGGATT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCTCAAACTCAGAAATCCACTGCCTCTGCCTCCCAAGTGCTGGGATT  734

seq1  AAAGGCATGCACTACCACTGCTCAGCTACAACCCAGATTTCTTATTCAGA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGCATGCACTACCACTGCTCAGCTACAACCCAGATTTCTTATTCAGA  784

seq1  CTGTTTCTAGTCAGGTCGTTCAGTTGCAAAGGGTGGAAATAATACAGAGC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTTCTAGTCAGGTCGTTCAGTTGCAAAGGGTGGAAATAATACAGAGC  834

seq1  AATTTCTGTAGCCTCAGTTTCCTGAGCTCTGTGCTACTGAGAAAAGCTGT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTCTGTAGCCTCAGTTTCCTGAGCTCTGTGCTACTGAGAAAAGCTGT  884

seq1  CCTTGTGCAGGGGCCGCTGGCAGCTTAACTTTGTTTCTAGTTTGCAGTAA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGTGCAGGGGCCGCTGGCAGCTTAACTTTGTTTCTAGTTTGCAGTAA  934

seq1  GTGTGACTTCGACAGAAAGGAGAGCTGCAGGGGACAAAAGCAGCCATTTA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGACTTCGACAGAAAGGAGAGCTGCAGGGGACAAAAGCAGCCATTTA  984

seq1  AACAGTGCATCAGGGAAGAGGAAGAGAAACCACAAAGAGCTGGTCCCCCC  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGTGCATCAGGGAAGAGGAAGAGAAACCACAAAGAGCTGGTCCCCCC  1034

seq1  TCCCTGGCTCTCTCCCTGGCTCTGCTTAGACATGGACCAGCCTTGGACAC  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTGGCTCTCTCCCTGGCTCTGCTTAGACATGGACCAGCCTTGGACAC  1084

seq1  CAAGGAGAGTGCAGCTGAACCCGCTTCAGTTGCATTTGCTCCTGGGTTAG  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGAGAGTGCAGCTGAACCCGCTTCAGTTGCATTTGCTCCTGGGTTAG  1134

seq1  AAGTGGCGATGCCAATGCAGCAGTGAATTC  1178
      ||||||||||||||||||||||||||||||
seq2  AAGTGGCGATGCCAATGCAGCAGTGAATTC  1164

seq1: chr10_19533807_19534176
seq2: B6Ng01-137E11.g_69_438

seq1  GAATTCATCACAGACTGAAGTCTGCCAAGGGTCATCATGGGCCCCAGATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATCACAGACTGAAGTCTGCCAAGGGTCATCATGGGCCCCAGATA  50

seq1  CCTCGTCCAACTGCCTATATCTTCCACATCTCTCTAGTAAGAGGACATTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCGTCCAACTGCCTATATCTTCCACATCTCTCTAGTAAGAGGACATTT  100

seq1  AATCTTCCAATCATCACTAAGCTATTGGAGTTCAGTTCCCTGTGAGAGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTTCCAATCATCACTAAGCTATTGGAGTTCAGTTCCCTGTGAGAGCA  150

seq1  CCATGCTCATAAGGAACTTGCGTACCCCCTCTCCGGTGAGCCTGGCTGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGCTCATAAGGAACTTGCGTACCCCCTCTCCGGTGAGCCTGGCTGCT  200

seq1  GCTTGCACATTTCAGGAGGCTCAGTTCCAAACCTTGGTGGTGGAGGGATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGCACATTTCAGGAGGCTCAGTTCCAAACCTTGGTGGTGGAGGGATG  250

seq1  GATAATTAGTTTCCTTTGTCCCTATTTGGAATGTGCTAGTAGACAGGCAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAATTAGTTTCCTTTGTCCCTATTTGGAATGTGCTAGTAGACAGGCAG  300

seq1  ACAGACAGACAGGCACGCAGGCAGATGAGGGGGAAGGAAGAGAGGGAAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGACAGACAGGCACGCAGGCAGATGAGGGGGAAGGAAGAGAGGGAAGG  350

seq1  AAGAAGAGTAAGGGAGAGAG  370
      ||||||||||||||||||||
seq2  AAGAAGAGTAAGGGAGAGAG  370