BAC Information

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BAC

Clone NameB6Ng01-137E16
Chromosome10 (Build37)
Map Location 15,203,811 - 15,204,930
singlet/doubletsinglet
Overlap genenone
Upstream geneGpr126, LOC100039571, LOC100039409, Vta1, D230044M03Rik, EG666904, Nmbr, LOC666917
Downstream geneLOC637043, LOC100039492, LOC671439, LOC382457
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-137E16.bB6Ng01-137E16.g
ACCDH936847DH936848
length1,2391,114
definitionDH936847|Mus musculus domesticus DNA, BAC clone: B6Ng01-137E16, 5' end.DH936848|Mus musculus domesticus DNA, BAC clone: B6Ng01-137E16, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctgggaactaaactcagtgctctgcaaaatcaccagtttcttaat
cactaggaaaccttttccaggcctttgctgcttgtttcatcagggaaatg
caaatcaaaacaaccctgagattcaacctcacaaggtttcctggagggga
ggaatcctgaaaaggggataccattttaaatgtaaataaagaaaacatca
taaaacaaaacaaaacaaaacaaaaaaccctcaggtgacagcaaatgttg
acaaggatgtggagaaagaggaacactcttccattggtggtgggattgca
agcttgtacaacaactctggaaatcaatttggtggttcctcagaaaatta
gacatagtactacctgaggacccagctataccactcctgcacatatatcc
agaagatgctccaacatgtaataaagacacatgttccactatgttcatag
cagccttatttataatagccagaagctgaaaagagcccagatgtccctca
acagaggaatagatacagaaaatgtggtacatttacacaatggagggcta
ctcagctatcaaaaacaatgacttcacaaaattcttaggcaaatggaagg
aactagaaaatatcatcctgagtgatgtaacccaatcacaaaagaataca
catgatatgcactcactgataagtggatattagcccagaagctcagaaca
cccaagatacaattcacagaccacatgaagctcaaaaaaaaggaagacca
aagtatgaataatttggtccttcttagaaggtcaaacaaaatacccatgg
gaggagatacacagacaaagtgtggagcagagactgaaggaaaggccatc
cagagactgcccacctgaaggatctatcccatatagagttaccaaaaccc
agacactattgtggatgccaacagtgcttgctgagaggagcctgatatag
ctgtctcctgaagaggctctgccagtgcctaacaaatactgaggtggatg
cttctcagccaccactggtctgagcgcaggtcctcaatggagggagctag
agaaatgccaggggctgatgagttgcagcctcgaggagacaacaatatga
acacagtactctaagctctgactaatcagcaccaaggagtacattggaga
ccatgctcagctctcttatgcgaatgctgtagacatcatgaagagatagc
cctggtactgtgaagtctcatagtatgaccgtagttaga
gaattccaagaacactctgaataaacaaaaaattacaagtctcttctttt
gtttccttgaaggggtctcatgtgcaagcaatgttattcctggactatat
tcctacaaaagatagactaaattctgattgagtgtataaaggcaattaac
aaagcaagctgatgtttctgaatatgggaaagtaggttttcagacgtatc
cctcttactgaaaatataaaggcatccttggtgacataaacaagaaaata
taaaaatcagtcaggcaatcaatcaaaataaaaggatattactacatcct
taagccaacttggagataataggagcagatatacaatgaaaaacatagat
tttcacgatgtaacgaaggaattttgattttaatatttcatccacctttt
ctcctgaagttagactgctaatcatcatgttggataattttttaaatgaa
ttaaaattaaatgcaaatactacaatttagttctttgaatgaattagatt
catttttagtgttcataaatcacataggatcagcagctgccattgagcca
tagaaattgagaactgctattgtctgagttttcctgcacagtactgaaaa
agcaagtacttacaatgagaagcagcaaaggttccctgagcaaccttgaa
agtctcagggaatgaggggaagaaattttaagttaaggttgtttaggggt
aaagagcagatgttaaaaaagtcaacttcgctttcatcttcaccctgagg
aggatgcaacaagaaataagaattcgctaggaatcatccttttcttacag
aagctaagctggctttatgtcattccaatacagatatttgtgtcaaaata
aacatgcttatagataagattcagatagaaacaataacatgaaatgaaaa
taatgaggaaagcaattactatgaagaggataaaataaaaaaattaaatt
aaagaaagtctaaaagaaaattctgaagttgaaattaaatggaatagatt
ctcaccaatgtttggacaaatataatgaaaactatgtcatgcctcattaa
aaatagatggcttcattaactgaataatcaagaagaagatatgaaaaggg
aggggaggtgtaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_15203811_15204930
seq2: B6Ng01-137E16.g_67_1180 (reverse)

seq1  TCTACACCTCCCTCCCCCTTTC-TATCTTCTTCTTGATTAATCAGTTAAT  49
      ||||||||||||  ||| |||| ||||||||||||||||| |||||||||
seq2  TCTACACCTCCCCTCCCTTTTCATATCTTCTTCTTGATTATTCAGTTAAT  50

seq1  TGAGCCATCTATTTTTTAATGAGGCATGACATAGTTTTTTCATTATTATA  99
        ||||||||| ||||||||||||||||||||||  ||||||||| ||| 
seq2  GAAGCCATCTA-TTTTTAATGAGGCATGACATAG--TTTTCATTA-TATT  96

seq1  TGTCCAAACATTGGTGAGAATCTATTCCATTTAATTTCCACTTCAGAA-T  148
      |||||||||||||||||||||||||||||||||||||| ||||||||| |
seq2  TGTCCAAACATTGGTGAGAATCTATTCCATTTAATTTCAACTTCAGAATT  146

seq1  TTCTTTTAGACTTTTCTTTAATTTAATTTTTTTATTTTATCCTCTTCATA  198
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTTAGAC-TTTCTTTAATTTAATTTTTTTATTTTATCCTCTTCATA  195

seq1  GTAATTGCTTTCCTCATTATTTTCATTTCATGTTATTGTTTCTTATCTGA  248
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  GTAATTGCTTTCCTCATTATTTTCATTTCATGTTATTGTTTC-TATCTGA  244

seq1  ATTCTTATCTATAAGCATGTTTATTTTGACACAAATATCTGTATTGGAAT  298
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  A-TCTTATCTATAAGCATGTTTATTTTGACACAAATATCTGTATTGGAAT  293

seq1  GACATAAAGCCAGCTTAGCTTCTGTAAGAAAAGGATGATTCCTAGCGAAT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATAAAGCCAGCTTAGCTTCTGTAAGAAAAGGATGATTCCTAGCGAAT  343

seq1  TCTTATTTCTTGTTGCATCCTCCTCAGGGTGAAGATGAAAGCGAAGTTGA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTATTTCTTGTTGCATCCTCCTCAGGGTGAAGATGAAAGCGAAGTTGA  393

seq1  CTTTTGTTAACATCTGCTCTTTACCCCTAAACAACCTTAACTTAAAATTT  448
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTT-TTAACATCTGCTCTTTACCCCTAAACAACCTTAACTTAAAATTT  442

seq1  CTTCCCCTCATTCCCTGAGACTTTCAAGGTTGCTCAGGGAACCTTTGCTG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCCCTCATTCCCTGAGACTTTCAAGGTTGCTCAGGGAACCTTTGCTG  492

seq1  CTTCTCATTGTAAGTACTTGCTTTTTCAGTACTGTGCAGGAAAACTCAGA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTCATTGTAAGTACTTGCTTTTTCAGTACTGTGCAGGAAAACTCAGA  542

seq1  CAATAGCAGTTCTCAATTTCTATGGCTCAATGGCAGCTGCTGATCCTATG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATAGCAGTTCTCAATTTCTATGGCTCAATGGCAGCTGCTGATCCTATG  592

seq1  TGATTTATGAACACTAAAAATGAATCTAATTCATTCAAAGAACTAAATTG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTTATGAACACTAAAAATGAATCTAATTCATTCAAAGAACTAAATTG  642

seq1  TAGTATTTGCATTTAATTTTAATTCATTTAAAAAATTATCCAACATGATG  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTATTTGCATTTAATTTTAATTCATTTAAAAAATTATCCAACATGATG  692

seq1  ATTAGCAGTCTAACTTCAGGAGAAAAGGTGGATGAAATATTAAAATCAAA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGCAGTCTAACTTCAGGAGAAAAGGTGGATGAAATATTAAAATCAAA  742

seq1  ATTCCTTCGTTACATCGTGAAAATCTATGTTTTTCATTGTATATCTGCTC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCTTCGTTACATCGTGAAAATCTATGTTTTTCATTGTATATCTGCTC  792

seq1  CTATTATCTCCAAGTTGGCTTAAGGATGTAGTAATATCCTTTTATTTTGA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTATCTCCAAGTTGGCTTAAGGATGTAGTAATATCCTTTTATTTTGA  842

seq1  TTGATTGCCTGACTGATTTTTATATTTTCTTGTTTATGTCACCAAGGATG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATTGCCTGACTGATTTTTATATTTTCTTGTTTATGTCACCAAGGATG  892

seq1  CCTTTATATTTTCAGTAAGAGGGATACGTCTGAAAACCTACTTTCCCATA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTATATTTTCAGTAAGAGGGATACGTCTGAAAACCTACTTTCCCATA  942

seq1  TTCAGAAACATCAGCTTGCTTTGTTAATTGCCTTTATACACTCAATCAGA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGAAACATCAGCTTGCTTTGTTAATTGCCTTTATACACTCAATCAGA  992

seq1  ATTTAGTCTATCTTTTGTAGGAATATAGTCCAGGAATAACATTGCTTGCA  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAGTCTATCTTTTGTAGGAATATAGTCCAGGAATAACATTGCTTGCA  1042

seq1  CATGAGACCCCTTCAAGGAAACAAAAGAAGAGACTTGTAATTTTTTGTTT  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAGACCCCTTCAAGGAAACAAAAGAAGAGACTTGTAATTTTTTGTTT  1092

seq1  ATTCAGAGTGTTCTTGGAATTC  1120
      ||||||||||||||||||||||
seq2  ATTCAGAGTGTTCTTGGAATTC  1114