BAC Information

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BAC

Clone NameB6Ng01-137K05
Chromosome10 (Build37)
Map Location 76,250,557 - 76,251,731
singlet/doubletsinglet
Overlap genePcbp3
Upstream geneGstt1, Gstt4, Gstt2, Mif, Derl3, Smarcb1, Mmp11, Ndg2, Gm867, Vpreb3, EG333669, Suhw2, Slc5a4b, Slc5a4a, LOC100040150, Prmt2, S100b, Dip2a, Pcnt, 2610028H24Rik, A130042E20Rik, Mcm3ap, Lss, 1700027D21Rik, Ftcd, Col6a2, Col6a1
Downstream geneLOC100041099, Slc19a1, Col18a1, LOC665762, Pofut2, Adarb1, 1810008A18Rik, Itgb2, Pttg1ip, Sumo3, Ube2g2, LOC674243, LOC670895, Krtap12-1, A030009A09Rik, LOC100041250, LOC100041261, LOC634517, LOC100041281, LOC634504
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-137K05.bB6Ng01-137K05.g
ACCDH937107DH937108
length1,1771,193
definitionDH937107|Mus musculus domesticus DNA, BAC clone: B6Ng01-137K05, 5' end.DH937108|Mus musculus domesticus DNA, BAC clone: B6Ng01-137K05, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctctccatccttgaccagaacttgaggaggttgctcctgtctggt
ggctccttctctcatctcttacccctctgttcccacatctctctttacat
ggtccgtctgagtcttacccagtgctacccggggatagtagttcccttga
agtctgcagacctataggcctgttgtgctggatggcctgacagacaggag
atgccttcttatccttcaccacacctgcctctagtcagagcagttaccac
tgccaaggttgaaacctcatgatgcccaccccaacccccactcacatcta
gacaagacgatggccacaggctagcatcaggagacacaaccaagtgtgtc
ccttcagcctgcctggctagtgctggaggctaggaagcccaagcctgaaa
tttgcttgtccttgatgtctgatctgccctcctccctccccaccccccca
tcccaaatgactacccactttctcaggagccttagcgataaggctagcgt
atcacagagagtgtagccggctctgagcgaggcgggcaggcgacggtggg
tgtgttggcccaccgtgttcatactgtacctccagcatgaccacacagat
ctgtttcacacactggatgatggcgtctggggtccctgagatagtcactg
cccgctctgtggagttgggcagcatgtcacctgccacctggacctgagca
cctgtggactgcagagaagggccgttggaaggaccgcaaactggaggcag
tgacaggttaagaggagtggcacccccaactcctggggacacattctggt
tggtctgtacctgaaaactctttactagaacggggccttaactggtcaca
gtcccttcatcctcatcttactaaatgtcactgtcctgtcactacccctc
attcttgcctctgcacgggctctgaaggaagcttgtggcttcctggaatg
aatggcactgtcccaccttatcaagttaattgacttggtagaagcagtgg
ttctcaacccttcctaatgctgcgaaccctttaataaggttctacgtggt
ggtgaccctcaatcataaaataatttcgttgtacattcgaacttgaattt
tgccaactaattatggaattgaatgtaactattcagaagtttccaaaagc
ccaaggtgaacctgtggaaggggccgt
gaattctgaatattaatagtcctaatttcccaatctaaagatatggtgta
tctattgtctgccttcattcctatctccttgtactaaggtcaaatctaag
tggattaaggaactccacataaaaccagcgacactgaaacttatagagga
gaaagtagggaaaaacctcaaagatatgagtacaggggaaaaattcctga
atagaacagcaatggattgtgctgtaagatcgagaattgataaatgggac
ctcataaagttgcaaagcttctgcaaggcaaaagacaccgtcaataagac
aaaaagaccaccaacagattgagaaaggatctttacctatcctaaatcag
ataggggactaatatccaatatatataaggaactcaagaaggtggactct
agaaaatcaaataaccccattacaaaatggggctcagagctaaacaaaga
attctcacctgaggaatactgaatggcagagaagcacctgaaaaaatgtt
caacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagattc
cacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagcag
atgctggcgagaatgtggagaaagaagaacactcctccattgttggtggg
attgcaagcttgtacaaccactctggaaatcagtctggcagttcctcaga
aaattggacatagtactaccggaggatcccacaataactctcctgggcat
atatccagaagatgtcccaactggtaagaaggacacatgctccactatgt
tcatagcagccttatttataatagccagaagctggaaagaacccagatgc
tcctcaacagaggaatggatacaaaaatgtggtacatttacacaatggag
tactactcagctattaaaaagatgaatttattgaaatcctaggcaatggt
tggacctggagggcatcatcctgagtgacgtacccatcacaaagactcaa
atgatatgtattcactaacagtgaaattagcccagaactagtatagcaga
tattggtcagttgcaaacacatgaaactgaagaagaacgagacagttgga
cctggcccttctgattgaacattccatgaggattcagagcagtgactgac
agatgaccttagactgcatcaggaatcatcctcattataggct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_76250557_76251731
seq2: B6Ng01-137K05.b_47_1223

seq1  GAATTCTCTCCATCCTTGACCAGAACTTGAGGAGGTTGCTCCTGTCTGGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTCCATCCTTGACCAGAACTTGAGGAGGTTGCTCCTGTCTGGT  50

seq1  GGCTCCTTCTCTCATCTCTTACCCCTCTGTTCCCACATCTCTCTTTACAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCCTTCTCTCATCTCTTACCCCTCTGTTCCCACATCTCTCTTTACAT  100

seq1  GGTCCGTCTGAGTCTTACCCAGTGCTACCCGGGGATAGTAGTTCCCTTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCCGTCTGAGTCTTACCCAGTGCTACCCGGGGATAGTAGTTCCCTTGA  150

seq1  AGTCTGCAGACCTATAGGCCTGTTGTGCTGGATGGCCTGACAGACAGGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTGCAGACCTATAGGCCTGTTGTGCTGGATGGCCTGACAGACAGGAG  200

seq1  ATGCCTTCTTATCCTTCACCACACCTGCCTCTAGTCAGAGCAGTTACCAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCTTCTTATCCTTCACCACACCTGCCTCTAGTCAGAGCAGTTACCAC  250

seq1  TGCCAAGGTTGAAACCTCATGATGCCCACCCCAACCCCCACTCACATCTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCAAGGTTGAAACCTCATGATGCCCACCCCAACCCCCACTCACATCTA  300

seq1  GACAAGACGATGGCCACAGGCTAGCATCAGGAGACACAACCAAGTGTGTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAAGACGATGGCCACAGGCTAGCATCAGGAGACACAACCAAGTGTGTC  350

seq1  CCTTCAGCCTGCCTGGCTAGTGCTGGAGGCTAGGAAGCCCAAGCCTGAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCAGCCTGCCTGGCTAGTGCTGGAGGCTAGGAAGCCCAAGCCTGAAA  400

seq1  TTTGCTTGTCCTTGATGTCTGATCTGCCCTCCTCCCTCCCCACCCCCCCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCTTGTCCTTGATGTCTGATCTGCCCTCCTCCCTCCCCACCCCCCCA  450

seq1  TCCCAAATGACTACCCACTTTCTCAGGAGCCTTAGCGATAAGGCTAGCGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAAATGACTACCCACTTTCTCAGGAGCCTTAGCGATAAGGCTAGCGT  500

seq1  ATCACAGAGAGTGTAGCCGGCTCTGAGCGAGGCGGGCAGGCGACGGTGGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACAGAGAGTGTAGCCGGCTCTGAGCGAGGCGGGCAGGCGACGGTGGG  550

seq1  TGTGTTGGCCCACCGTGTTCATACTGTACCTCCAGCATGACCACACAGAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTTGGCCCACCGTGTTCATACTGTACCTCCAGCATGACCACACAGAT  600

seq1  CTGTTTCACACACTGGATGATGGCGTCTGGGGTCCCTGAGATAGTCACTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTTCACACACTGGATGATGGCGTCTGGGGTCCCTGAGATAGTCACTG  650

seq1  CCCGCTCTGTGGAGTTGGGCAGCATGTCACCTGCCACCTGGACCTGAGCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCGCTCTGTGGAGTTGGGCAGCATGTCACCTGCCACCTGGACCTGAGCA  700

seq1  CCTGTGGACTGCAGAGAAGGGCCGTTGGAAGGACCGCAAACTGGAGGCAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTGGACTGCAGAGAAGGGCCGTTGGAAGGACCGCAAACTGGAGGCAG  750

seq1  TGACAGGTTAAGAGGAGTGGCACCCCCAACTCCTGGGGACACATTCTGGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAGGTTAAGAGGAGTGGCACCCCCAACTCCTGGGGACACATTCTGGT  800

seq1  TGGTCTGTACCTGAAAACTCTTCACTAGAAACGGGGCCTTAACTGGTCAC  850
      |||||||||||||||||||||| ||||| |||||||||||||||||||||
seq2  TGGTCTGTACCTGAAAACTCTTTACTAG-AACGGGGCCTTAACTGGTCAC  849

seq1  AGTCCCTTCATCCCTCATCTTACTAAATGTCACTGTCCTGTCACTACCCC  900
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  AGTCCCTTCAT-CCTCATCTTACTAAATGTCACTGTCCTGTCACTACCCC  898

seq1  TCAATCTTGCCTCTGCACGGCCTCTG-AGGAAGC-TGTGGCTTCCTGGAA  948
      ||| |||||||||||||||| ||||| ||||||| |||||||||||||||
seq2  TCATTCTTGCCTCTGCACGGGCTCTGAAGGAAGCTTGTGGCTTCCTGGAA  948

seq1  TGAATGGCACTGTCCCACCTCATCAAGTTTACTGACTTGGTAG-AGCAGT  997
      |||||||||||||||||||| |||||||| | ||||||||||| ||||||
seq2  TGAATGGCACTGTCCCACCTTATCAAGTTAATTGACTTGGTAGAAGCAGT  998

seq1  GGTTCTCAA-CCTTCCT-ATGCTGCG-ACCCTTTAATACAGTTTCTTACG  1044
      ||||||||| ||||||| |||||||| ||||||||||| || ||| ||||
seq2  GGTTCTCAACCCTTCCTAATGCTGCGAACCCTTTAATA-AGGTTC-TACG  1046

seq1  TTGTGGTGACCCTCAATCATAAAATTATTTTCGTTGTTACTTCGTAACTG  1094
      | |||||||||||||||||||||| || |||||||||   |||| |||| 
seq2  TGGTGGTGACCCTCAATCATAAAA-TAATTTCGTTGTACATTCG-AACT-  1093

seq1  TGATTTTTG-CTACT-ATTAT-GAATTGTAATGTAACTA-TCAGAGTTTT  1140
      ||| ||||| | ||| ||||| |||||| |||||||||| |||||  |||
seq2  TGAATTTTGCCAACTAATTATGGAATTG-AATGTAACTATTCAGAAGTTT  1142

seq1  CCAATAGTCCTAGGTGACCCCTGTGG-AGGGGCCGT  1175
      |||| || || ||||||  ||||||| |||||||||
seq2  CCAAAAGCCCAAGGTGA-ACCTGTGGAAGGGGCCGT  1177