BAC Information

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BAC

Clone NameB6Ng01-137P08
Chromosome10 (Build37)
Map Location 110,454,912 - 110,603,195
singlet/doubletdoublet
Overlap geneEG432502, LOC667904, Osbpl8
Upstream geneLOC100042502, LOC100042506, LOC100042510, LOC667855, 9230102K24Rik, LOC100042518, E2f7, Csrp2, Zdhhc17
Downstream geneBbs10, Nap1l1, EG382421, Phlda1, Krr1, Glipr1, EG639527, Glipr1l1, Glipr1l2, LOC627895, Glipr1l3, Caps2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-137P08.bB6Ng01-137P08.g
ACCDH937340DH937341
length4961,064
definitionDH937340|Mus musculus domesticus DNA, BAC clone: B6Ng01-137P08, 5' end.DH937341|Mus musculus domesticus DNA, BAC clone: B6Ng01-137P08, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(110,454,912 - 110,455,413)(110,602,129 - 110,603,195)
sequence
atgttcagggcttcattagaatcctatgcatgttccggaagtgttgcagg
ttgttagttgatctcaggtcatttctagaaagttctccagcactgccctc
tctccacgcctctgttattagaagagcatatttatatcaggaacctcggg
ctcttttatattaacctctttacctgagagtagactagaatcaaaagcaa
ggatttattttttttttaattattttaggcagtgtctcagtgggtagtcc
tgactgacttggagtttcctctgtagaccaggctgtccatggtctcacag
agtttggcctgcctctgcctcctgagtagttggatcggggttccaggaca
gctaggactgttacacagagaaaccctgtctcaaaaaaggaagaaaggaa
gaaaggaagaaaggaagaaagaaagaaagagagagagagagagagagaga
gagagaggaaggaaggaaggaaggaaggaaggaaggaaggaaggaa
gaattccctgctaacccaaggtattctaatactactgttacttaagtctt
ccagcagcaaaaaggcacaaacttcattaagttattgaaagcagatatgc
tatcgtcagataagtgttcccatctgtttagagacgaacccaagttaact
tatttcagacggcatttagttaaaatgaaattaggttatgtttcacgacg
cagatgtcgctcacaaagaagtgttaaatgactttagtgaatggaaaatc
tgcatctactgttgcttcgcatcagccggtcttgagtgggttgctcaatg
aagcaaaagcatgctccatatgaaactccctggaacctgattacactctc
cacagcttagccgcaaacaaaacgtaaaaaaaaaaaaaaaaaaagtgcaa
cgaagacaccgccttttctccagtgtggcaagaaggccaacggagctgag
gtttaaggaacaccgcgacagtctctgcaaaggcgggtgcggtccgcctg
cgagcggcacaacctcttcaggggctgtcacaggaaaaccccaagccttg
ccttaaccgcccggggcgacaaagcgccaggttttcaccccctgcgcggg
gggcttccggcgagccccggcgtcgccctgtcaaacttcgggaggggcag
acacactcgggacccggaacgccgccgagccgcccccgcccccatcccag
gtccccactgggctttgtaccgctgcagacgcacctaccgcgggccccaa
aaaacacgccacccccgccagccctgccaatctccctctcagaagggaca
aaggagaggcaggaggggaactcgcggcgcggggtacccacgagtgccca
cagcccggagctcagaacgtaggactgagggactacagtcaccctcaaaa
ggcacgactctgctgctccccacaccgggctggagcgccactctaccgat
gcggagctccagaggaggcggcccgcaggagcaggcttccgtgggatcac
agggacgccggagtccggggcttagtttcggggaccccccctcctcacct
tctctggctgcggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_110454912_110455413
seq2: B6Ng01-137P08.b_48_549

seq1  GAATTCATGTTCAGGGCTTCATTAGAATCCTATGCATGTTCCGGAAGTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATGTTCAGGGCTTCATTAGAATCCTATGCATGTTCCGGAAGTGT  50

seq1  TGCAGGTTGTTAGTTGATCTCAGGTCATTTCTAGAAAGTTCTCCAGCACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGGTTGTTAGTTGATCTCAGGTCATTTCTAGAAAGTTCTCCAGCACT  100

seq1  GCCCTCTCTCCACGCCTCTGTTATTAGAAGAGCATATTTATATCAGGAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTCTCTCCACGCCTCTGTTATTAGAAGAGCATATTTATATCAGGAAC  150

seq1  CTCGGGCTCTTTTATATTAACCTCTTTACCTGAGAGTAGACTAGAATCAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCGGGCTCTTTTATATTAACCTCTTTACCTGAGAGTAGACTAGAATCAA  200

seq1  AAGCAAGGATTTATTTTTTTTTTAATTATTTTAGGCAGTGTCTCAGTGGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAAGGATTTATTTTTTTTTTAATTATTTTAGGCAGTGTCTCAGTGGG  250

seq1  TAGTCCTGACTGACTTGGAGTTTCCTCTGTAGACCAGGCTGTCCATGGTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTCCTGACTGACTTGGAGTTTCCTCTGTAGACCAGGCTGTCCATGGTC  300

seq1  TCACAGAGTTTGGCCTGCCTCTGCCTCCTGAGTAGTTGGATCGGGGTTCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAGAGTTTGGCCTGCCTCTGCCTCCTGAGTAGTTGGATCGGGGTTCC  350

seq1  AGGACAGCTAGGACTGTTACACAGAGAAACCCTGTCTCAAAAAAGGAAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACAGCTAGGACTGTTACACAGAGAAACCCTGTCTCAAAAAAGGAAGA  400

seq1  AAGGAAGAAAGGAAGAAAGGAAGAAAGAAAGAAAGAGAGAGAGAGAGAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAAGAAAGGAAGAAAGGAAGAAAGAAAGAAAGAGAGAGAGAGAGAGA  450

seq1  GAGAGAGAGAGAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAGAGAGAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGG  500

seq1  AA  502
      ||
seq2  AA  502

seq1: chr10_110602129_110603195
seq2: B6Ng01-137P08.g_70_1133 (reverse)

seq1  ACCGCAGCCGAGAGAAGTTGAGGAGGGGGGGTCCCACCGGACACTAAGGC  50
      ||||||||| ||||||| |||||||||||||||   || || ||||| ||
seq2  ACCGCAGCC-AGAGAAGGTGAGGAGGGGGGGTC---CCCGAAACTAA-GC  45

seq1  CCCGGACTCCGGCGTCCCTGTGATCCCACGGAAGCCTGCTCCCTGCGGGC  100
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  CCCGGACTCCGGCGTCCCTGTGATCCCACGGAAGCCTGCT-CCTGCGGGC  94

seq1  CGCCTCCTCTGGGGCTCCGCATCGGT-GAGTGGCGCT-CAGCCCGGTGTT  148
      |||||||||||| ||||||||||||| |||||||||| |||||||||| |
seq2  CGCCTCCTCTGGAGCTCCGCATCGGTAGAGTGGCGCTCCAGCCCGGTG-T  143

seq1  GGGGAGCAGCGGAGTCGTGCCTTTTG-GGGTGACTGTAGTCCCTCAGTCC  197
      |||||||||| ||||||||||||||| |||||||||||||||||||||||
seq2  GGGGAGCAGCAGAGTCGTGCCTTTTGAGGGTGACTGTAGTCCCTCAGTCC  193

seq1  TACGTTCTGAGCT-CGGGCTGTGGGCACTCGTGGGTACCCCGCGCCGCGA  246
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  TACGTTCTGAGCTCCGGGCTGTGGGCACTCGTGGGTACCCCGCGCCGCGA  243

seq1  GTTCCCCTCCTGCCTCTCCTTTGTCCCTTCTGAGAGGGAGATTGGCAGGG  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCCCTCCTGCCTCTCCTTTGTCCCTTCTGAGAGGGAGATTGGCAGGG  293

seq1  CTGGCGGGGGTGGCGTGTTTTTTGGGGCCCGCGGTAGGTGCGTCTGCAGC  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCGGGGGTGGCGTGTTTTTTGGGGCCCGCGGTAGGTGCGTCTGCAGC  343

seq1  GGTACAAAGCCCAGTGGGGACCTGGGATGGGGGCGGGGGCGGCTCGGCGG  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTACAAAGCCCAGTGGGGACCTGGGATGGGGGCGGGGGCGGCTCGGCGG  393

seq1  CGTTCCGGGTCCCGAGTGTGTCTGCCCCTCCCGAAGTTTGACAGGGCGAC  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTTCCGGGTCCCGAGTGTGTCTGCCCCTCCCGAAGTTTGACAGGGCGAC  443

seq1  GCCGGGGCTCGCCGGAAGCCCCCCGCGCAGGGGGTGAAAACCTGGCGCTT  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCGGGGCTCGCCGGAAGCCCCCCGCGCAGGGGGTGAAAACCTGGCGCTT  493

seq1  TGTCGCCCCGGGCGGTTAAGGCAAGGCTTGGGGTTTTCCTGTGACAGCCC  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCGCCCCGGGCGGTTAAGGCAAGGCTTGGGGTTTTCCTGTGACAGCCC  543

seq1  CTGAAGAGGTTGTGCCGCTCGCAGGCGGACCGCACCCGCCTTTGCAGAGA  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAGAGGTTGTGCCGCTCGCAGGCGGACCGCACCCGCCTTTGCAGAGA  593

seq1  CTGTCGCGGTGTTCCTTAAACCTCAGCTCCGTTGGCCTTCTTGCCACACT  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCGCGGTGTTCCTTAAACCTCAGCTCCGTTGGCCTTCTTGCCACACT  643

seq1  GGAGAAAAGGCGGTGTCTTCGTTGCACTTTTTTTTTTTTTTTTTTTACGT  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAAAAGGCGGTGTCTTCGTTGCACTTTTTTTTTTTTTTTTTTTACGT  693

seq1  TTTGTTTGCGGCTAAGCTGTGGAGAGTGTAATCAGGTTCCAGGGAGTTTC  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTTGCGGCTAAGCTGTGGAGAGTGTAATCAGGTTCCAGGGAGTTTC  743

seq1  ATATGGAGCATGCTTTTGCTTCATTGAGCAACCCACTCAAGACCGGCTGA  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGGAGCATGCTTTTGCTTCATTGAGCAACCCACTCAAGACCGGCTGA  793

seq1  TGCGAAGCAACAGTAGATGCAGATTTTCCATTCACTAAAGTCATTTAACA  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCGAAGCAACAGTAGATGCAGATTTTCCATTCACTAAAGTCATTTAACA  843

seq1  CTTCTTTGTGAGCGACATCTGCGTCGTGAAACATAACCTAATTTCATTTT  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTTTGTGAGCGACATCTGCGTCGTGAAACATAACCTAATTTCATTTT  893

seq1  AACTAAATGCCGTCTGAAATAAGTTAACTTGGGTTCGTCTCTAAACAGAT  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTAAATGCCGTCTGAAATAAGTTAACTTGGGTTCGTCTCTAAACAGAT  943

seq1  GGGAACACTTATCTGACGATAGCATATCTGCTTTCAATAACTTAATGAAG  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAACACTTATCTGACGATAGCATATCTGCTTTCAATAACTTAATGAAG  993

seq1  TTTGTGCCTTTTTGCTGCTGGAAGACTTAAGTAACAGTAGTATTAGAATA  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTGCCTTTTTGCTGCTGGAAGACTTAAGTAACAGTAGTATTAGAATA  1043

seq1  CCTTGGGTTAGCAGGGAATTC  1067
      |||||||||||||||||||||
seq2  CCTTGGGTTAGCAGGGAATTC  1064